RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 LGR5O75473 907 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 PROCP04070 461 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 WEE1P30291 646 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 SCNN1AP37088 669 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 GATA4P43694 442 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 IDH3AP50213 366 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 BMS1Q14692 1282 aaKnown RBP4.9□□□□□ -1.63
CDHR3-206ENST00000468477 PLEKHG6Q3KR16 790 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 EAPPQ56P03 285 aaPredicted RBP4.9□□□□□ -1.63
CDHR3-206ENST00000468477 MICALL1Q8N3F8 863 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 ARMC5Q96C12 935 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 CCSER2Q9H7U1 834 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 JPH1Q9HDC5 661 aaPredicted RBP4.9□□□□□ -1.63
CDHR3-206ENST00000468477 FAM13BQ9NYF5 915 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 DMGDHQ9UI17 866 aaKnown RBP4.9□□□□□ -1.63
CDHR3-206ENST00000468477 HCN2Q9UL51 889 aa4.9□□□□□ -1.63
CDHR3-206ENST00000468477 ADAM23O75077 832 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 RGS9O75916 674 aaPredicted RBP4.89□□□□□ -1.63
CDHR3-206ENST00000468477 ABL1P00519 1130 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 NFKB1P19838 968 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 MCCP23508 829 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 ATP2B4P23634 1241 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 HSD3B2P26439 372 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 DNAJA1P31689 397 aaKnown RBP4.89□□□□□ -1.63
CDHR3-206ENST00000468477 MRPL58Q14197 206 aaKnown RBP4.89□□□□□ -1.63
CDHR3-206ENST00000468477 ZNF746Q6NUN9 644 aaPredicted RBP4.89□□□□□ -1.63
CDHR3-206ENST00000468477 TSHZ1Q6ZSZ6 1077 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 FILIP1Q7Z7B0 1213 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 CD163Q86VB7 1156 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 JAZF1Q86VZ6 243 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 METTL16Q86W50 562 aaKnown RBP4.89□□□□□ -1.63
CDHR3-206ENST00000468477 ZSCAN29Q8IWY8 852 aaPredicted RBP4.89□□□□□ -1.63
CDHR3-206ENST00000468477 TMEM87AQ8NBN3 555 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 TRIM11Q96F44 468 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 MYO19Q96H55 970 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 ASB16Q96NS5 453 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 GSX2Q9BZM3 304 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 IRF2BPLQ9H1B7 796 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 RBSNQ9H1K0 784 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 PCDH12Q9NPG4 1184 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 IFT57Q9NWB7 429 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 DNAJB12Q9NXW2 375 aaKnown RBP4.89□□□□□ -1.63
CDHR3-206ENST00000468477 KLK14Q9P0G3 267 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 SLC6A14Q9UN76 642 aa4.89□□□□□ -1.63
CDHR3-206ENST00000468477 C9orf172C9J069 976 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 PTCD1O75127 700 aaKnown RBP4.88□□□□□ -1.63
CDHR3-206ENST00000468477 MICAL2O94851 1124 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 ALBP02768 609 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 S100BP04271 92 aaPredicted RBP4.88□□□□□ -1.63
CDHR3-206ENST00000468477 RARAP10276 462 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 RBL2Q08999 1139 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 OS9Q13438 667 aaPredicted RBP4.88□□□□□ -1.63
CDHR3-206ENST00000468477 BIRC2Q13490 618 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 GNL2Q13823 731 aaKnown RBP4.88□□□□□ -1.63
CDHR3-206ENST00000468477 LDLRAD1Q5T700 205 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 SOGA3Q5TF21 947 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 FAM35AQ86V20 835 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 IFT43Q96FT9 208 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 TGIF2Q9GZN2 237 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 MAF1Q9H063 256 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 OSBPL2Q9H1P3 480 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 ANO2Q9NQ90 1003 aa4.88□□□□□ -1.63
CDHR3-206ENST00000468477 H3BRB1 525 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 WDHD1O75717 1129 aaPredicted RBP4.87□□□□□ -1.63
CDHR3-206ENST00000468477 MAP3K6O95382 1288 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 INPP5BP32019 993 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 CHRNA4P43681 627 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 RHBDL3P58872 404 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 NRG1Q02297 640 aaPredicted RBP4.87□□□□□ -1.63
CDHR3-206ENST00000468477 PSAPL1Q6NUJ1 521 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 ELMSAN1Q6PJG2 1045 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 KRBA2Q6ZNG9 492 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 DHX32Q7L7V1 743 aaKnown RBP4.87□□□□□ -1.63
CDHR3-206ENST00000468477 KRT25Q7Z3Z0 450 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 FMNL3Q8IVF7 1028 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 DCAF11Q8TEB1 546 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 NUDT8Q8WV74 236 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 CLP1Q92989 425 aaKnown RBP4.87□□□□□ -1.63
CDHR3-206ENST00000468477 MDFIQ99750 246 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 ACBD3Q9H3P7 528 aa4.87□□□□□ -1.63
CDHR3-206ENST00000468477 TUT1Q9H6E5 874 aaKnown RBP4.87□□□□□ -1.63
CDHR3-206ENST00000468477 QTRT2Q9H974 415 aaKnown RBP4.87□□□□□ -1.63
CDHR3-206ENST00000468477 MRPL42Q9Y6G3 142 aaKnown RBP4.87□□□□□ -1.63
CDHR3-206ENST00000468477 PRMT3O60678 531 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 ITGB2P05107 769 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 PSAPP07602 524 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 FURINP09958 794 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 CPB1P15086 417 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 ELNP15502 786 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 TNNI2P48788 182 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 FAM69CQ0P6D2 419 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 ZNF211Q13398 564 aaPredicted RBP4.86□□□□□ -1.63
CDHR3-206ENST00000468477 COL19A1Q14993 1142 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 C16orf46Q6P387 395 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 TREML1Q86YW5 311 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 GLYCTKQ8IVS8 523 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 RGL4Q8IZJ4 473 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 CMTR1Q8N1G2 835 aaKnown RBP4.86□□□□□ -1.63
CDHR3-206ENST00000468477 RNF34Q969K3 372 aa4.86□□□□□ -1.63
CDHR3-206ENST00000468477 COL26A1Q96A83 441 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms