RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 RAB3GAP1Q15042 981 aa12.18□□□□□ -0.46
MSH5-213ENST00000468136 CCDC102BQ68D86 513 aa12.18□□□□□ -0.46
MSH5-213ENST00000468136 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
MSH5-213ENST00000468136 CLEC17AQ6ZS10 378 aa12.18□□□□□ -0.46
MSH5-213ENST00000468136 RUFY3Q7L099 469 aa12.18□□□□□ -0.46
MSH5-213ENST00000468136 PTF1AQ7RTS3 328 aa12.18□□□□□ -0.46
MSH5-213ENST00000468136 TMX3Q96JJ7 454 aa12.18□□□□□ -0.46
MSH5-213ENST00000468136 TTC14Q96N46 770 aa12.18□□□□□ -0.46
MSH5-213ENST00000468136 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.18□□□□□ -0.46
MSH5-213ENST00000468136 ARAP2Q8WZ64 1704 aa12.17□□□□□ -0.46
MSH5-213ENST00000468136 PDS5AQ29RF7 1337 aaKnown RBP12.17□□□□□ -0.46
MSH5-213ENST00000468136 GOLGA6L22H0YM25 854 aa12.17□□□□□ -0.46
MSH5-213ENST00000468136 CD2BP2O95400 341 aaKnown RBP12.17□□□□□ -0.46
MSH5-213ENST00000468136 RXRBP28702 533 aa12.17□□□□□ -0.46
MSH5-213ENST00000468136 ADORA1P30542 326 aa12.17□□□□□ -0.46
MSH5-213ENST00000468136 RPS8P62241 208 aaKnown RBP12.17□□□□□ -0.46
MSH5-213ENST00000468136 MAP3K12Q12852 859 aa12.17□□□□□ -0.46
MSH5-213ENST00000468136 BLOC1S2Q6QNY1 142 aa12.17□□□□□ -0.46
MSH5-213ENST00000468136 TMC4Q7Z404 712 aa12.17□□□□□ -0.46
MSH5-213ENST00000468136 PDRG1Q9NUG6 133 aa12.17□□□□□ -0.46
MSH5-213ENST00000468136 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
MSH5-213ENST00000468136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
MSH5-213ENST00000468136 FAM177BA6PVY3 158 aa12.16□□□□□ -0.46
MSH5-213ENST00000468136 NPHP1O15259 732 aa12.16□□□□□ -0.46
MSH5-213ENST00000468136 CASTP20810 708 aaKnown RBP12.16□□□□□ -0.46
MSH5-213ENST00000468136 ZAP70P43403 619 aa12.16□□□□□ -0.46
MSH5-213ENST00000468136 ST5P78524 1137 aa12.16□□□□□ -0.46
MSH5-213ENST00000468136 CHRNDQ07001 517 aa12.16□□□□□ -0.46
MSH5-213ENST00000468136 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
MSH5-213ENST00000468136 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
MSH5-213ENST00000468136 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
MSH5-213ENST00000468136 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
MSH5-213ENST00000468136 ZNF804BA4D1E1 1349 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 GNAT2P19087 354 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 ADD2P35612 726 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 MCAMP43121 646 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 NBR1Q14596 966 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 ZNF589Q86UQ0 364 aaPredicted RBP12.15□□□□□ -0.46
MSH5-213ENST00000468136 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 SPATA5Q8NB90 893 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 EDC3Q96F86 508 aaKnown RBP12.15□□□□□ -0.46
MSH5-213ENST00000468136 LRRC4BQ9NT99 713 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 SRP68Q9UHB9 627 aaKnown RBP12.15□□□□□ -0.46
MSH5-213ENST00000468136 DENND2AQ9ULE3 1009 aa12.15□□□□□ -0.46
MSH5-213ENST00000468136 ZMYM6O95789 1325 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 TRIM37O94972 964 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 HSPD1P10809 573 aaKnown RBP12.14□□□□□ -0.47
MSH5-213ENST00000468136 RPS6KB1P23443 525 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 NFIXQ14938 502 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 TXNRD1Q16881 649 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 WASHC4Q2M389 1173 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 FAM182BQ5T319 152 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 BICDL1Q6ZP65 573 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 FBXL16Q8N461 479 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 NEK1Q96PY6 1258 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 MINPP1Q9UNW1 487 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 LEMD3Q9Y2U8 911 aa12.14□□□□□ -0.47
MSH5-213ENST00000468136 MAST3O60307 1309 aa12.13□□□□□ -0.47
MSH5-213ENST00000468136 TM4SF1P30408 202 aa12.13□□□□□ -0.47
MSH5-213ENST00000468136 MCM4P33991 863 aa12.13□□□□□ -0.47
MSH5-213ENST00000468136 PHKA1P46020 1223 aa12.13□□□□□ -0.47
MSH5-213ENST00000468136 KCNQ4P56696 695 aa12.13□□□□□ -0.47
MSH5-213ENST00000468136 GRAPQ13588 217 aa12.13□□□□□ -0.47
MSH5-213ENST00000468136 ALX1Q15699 326 aa12.13□□□□□ -0.47
MSH5-213ENST00000468136 IMMTQ16891 758 aaKnown RBP12.13□□□□□ -0.47
MSH5-213ENST00000468136 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
MSH5-213ENST00000468136 GRAPLQ8TC17 118 aaPredicted RBP12.13□□□□□ -0.47
MSH5-213ENST00000468136 UPF3BQ9BZI7 483 aaKnown RBP12.13□□□□□ -0.47
MSH5-213ENST00000468136 WDR19Q8NEZ3 1342 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 C4AP0C0L4 1744 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 BBOX1O75936 387 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 CYP2E1P05181 493 aaPredicted RBP12.12□□□□□ -0.47
MSH5-213ENST00000468136 GYS1P13807 737 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 NT5C2P49902 561 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 AK2P54819 239 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 CRY2Q49AN0 593 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 SLC9C2Q5TAH2 1124 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 C15orf52Q6ZUT6 534 aaKnown RBP12.12□□□□□ -0.47
MSH5-213ENST00000468136 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 OSBP2Q969R2 916 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 RBM17Q96I25 401 aaKnown RBP12.12□□□□□ -0.47
MSH5-213ENST00000468136 RGPD3A6NKT7 1758 aaPredicted RBP12.12□□□□□ -0.47
MSH5-213ENST00000468136 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 UBR3Q6ZT12 1888 aa12.12□□□□□ -0.47
MSH5-213ENST00000468136 BRWD3Q6RI45 1802 aa12.11□□□□□ -0.47
MSH5-213ENST00000468136 GPAA1O43292 621 aa12.11□□□□□ -0.47
MSH5-213ENST00000468136 PHF14O94880 888 aa12.11□□□□□ -0.47
MSH5-213ENST00000468136 PDCP20941 246 aa12.11□□□□□ -0.47
MSH5-213ENST00000468136 SCARF1Q14162 830 aa12.11□□□□□ -0.47
MSH5-213ENST00000468136 DHX32Q7L7V1 743 aaKnown RBP12.11□□□□□ -0.47
MSH5-213ENST00000468136 FBXO33Q7Z6M2 555 aa12.11□□□□□ -0.47
MSH5-213ENST00000468136 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
MSH5-213ENST00000468136 RPGRQ92834 1020 aaKnown RBP12.11□□□□□ -0.47
MSH5-213ENST00000468136 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
MSH5-213ENST00000468136 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
MSH5-213ENST00000468136 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
MSH5-213ENST00000468136 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms