RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 FAM177A1Q8N128 213 aaPredicted RBP10.68□□□□□ -0.7
LCA5-203ENST00000467898 ACBD3Q9H3P7 528 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 PIK3C2AO00443 1686 aa10.68□□□□□ -0.7
LCA5-203ENST00000467898 NAP1L1P55209 391 aaKnown RBP10.67□□□□□ -0.7
LCA5-203ENST00000467898 SDCCAG8Q86SQ7 713 aaPredicted RBP10.67□□□□□ -0.7
LCA5-203ENST00000467898 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.67□□□□□ -0.7
LCA5-203ENST00000467898 MYO6Q9UM54 1294 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 ZDHHC9Q9Y397 364 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 ZSCAN9O15535 394 aaPredicted RBP10.67□□□□□ -0.7
LCA5-203ENST00000467898 CDC25BP30305 580 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 BMP2KLQ5H9B9 411 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 IQCA1Q86XH1 822 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 FUCA2Q9BTY2 467 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 AKAP2Q9Y2D5 859 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 USP31Q70CQ4 1352 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 PIK3R4Q99570 1358 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 EPB41L2O43491 1005 aaKnown RBP10.67□□□□□ -0.7
LCA5-203ENST00000467898 RTN3O95197 1032 aaPredicted RBP10.67□□□□□ -0.7
LCA5-203ENST00000467898 SFSWAPQ12872 951 aaKnown RBP10.67□□□□□ -0.7
LCA5-203ENST00000467898 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 CDCA2Q69YH5 1023 aaPredicted RBP10.67□□□□□ -0.7
LCA5-203ENST00000467898 ISM2Q6H9L7 571 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 C17orf50Q8WW18 174 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 UBXN4Q92575 508 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 SAAL1Q96ER3 474 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 COG3Q96JB2 828 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 TMX3Q96JJ7 454 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 SYNPO2Q9UMS6 1093 aa10.67□□□□□ -0.7
LCA5-203ENST00000467898 SYNRGQ9UMZ2 1314 aa10.66□□□□□ -0.7
LCA5-203ENST00000467898 TMED1Q13445 227 aa10.66□□□□□ -0.7
LCA5-203ENST00000467898 FOXD4L6Q3SYB3 417 aaPredicted RBP10.66□□□□□ -0.7
LCA5-203ENST00000467898 CWC27Q6UX04 472 aaKnown RBP10.66□□□□□ -0.7
LCA5-203ENST00000467898 FOXD4L3Q6VB84 417 aaPredicted RBP10.66□□□□□ -0.7
LCA5-203ENST00000467898 AMOTL1Q8IY63 956 aa10.66□□□□□ -0.7
LCA5-203ENST00000467898 ZKSCAN4Q969J2 545 aaPredicted RBP10.66□□□□□ -0.7
LCA5-203ENST00000467898 TPD52L2O43399 206 aaKnown RBP10.66□□□□□ -0.7
LCA5-203ENST00000467898 OATP04181 439 aa10.66□□□□□ -0.7
LCA5-203ENST00000467898 CC2D1AQ6P1N0 951 aaPredicted RBP10.66□□□□□ -0.7
LCA5-203ENST00000467898 SPATA21Q7Z572 469 aa10.66□□□□□ -0.7
LCA5-203ENST00000467898 MYLK4Q86YV6 388 aaPredicted RBP10.66□□□□□ -0.7
LCA5-203ENST00000467898 MAB21L3Q8N8X9 362 aa10.66□□□□□ -0.7
LCA5-203ENST00000467898 STK31Q9BXU1 1019 aa10.66□□□□□ -0.7
LCA5-203ENST00000467898 CWC25Q9NXE8 425 aaPredicted RBP10.66□□□□□ -0.7
LCA5-203ENST00000467898 RBM47A0AV96 593 aaKnown RBP10.65□□□□□ -0.7
LCA5-203ENST00000467898 EFCAB8A8MWE9 144 aa10.65□□□□□ -0.7
LCA5-203ENST00000467898 PRKAR2BP31323 418 aa10.65□□□□□ -0.7
LCA5-203ENST00000467898 RRS1Q15050 365 aaKnown RBP10.65□□□□□ -0.7
LCA5-203ENST00000467898 PLEKHO1Q53GL0 409 aaPredicted RBP10.65□□□□□ -0.7
LCA5-203ENST00000467898 CCDC34Q96HJ3 373 aa10.65□□□□□ -0.7
LCA5-203ENST00000467898 LMCD1Q9NZU5 365 aa10.65□□□□□ -0.7
LCA5-203ENST00000467898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.65□□□□□ -0.7
LCA5-203ENST00000467898 ERC2O15083 957 aa10.65□□□□□ -0.7
LCA5-203ENST00000467898 SPC24Q8NBT2 197 aa10.65□□□□□ -0.7
LCA5-203ENST00000467898 MAGEC3Q8TD91 643 aa10.65□□□□□ -0.7
LCA5-203ENST00000467898 TSR2Q969E8 191 aaKnown RBP10.65□□□□□ -0.7
LCA5-203ENST00000467898 PHACTR3Q96KR7 559 aa10.65□□□□□ -0.7
LCA5-203ENST00000467898 ARFGAP3Q9NP61 516 aa10.65□□□□□ -0.7
LCA5-203ENST00000467898 ZCCHC17Q9NP64 241 aaKnown RBP10.65□□□□□ -0.7
LCA5-203ENST00000467898 ANKARQ7Z5J8 1434 aa10.65□□□□□ -0.71
LCA5-203ENST00000467898 EME2A4GXA9 379 aaPredicted RBP10.64□□□□□ -0.71
LCA5-203ENST00000467898 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
LCA5-203ENST00000467898 PAX3P23760 479 aa10.64□□□□□ -0.71
LCA5-203ENST00000467898 C3orf20Q8ND61 904 aa10.64□□□□□ -0.71
LCA5-203ENST00000467898 IRX2Q9BZI1 471 aaPredicted RBP10.64□□□□□ -0.71
LCA5-203ENST00000467898 TNNQ9UQP3 1299 aa10.64□□□□□ -0.71
LCA5-203ENST00000467898 SASH3O75995 380 aa10.64□□□□□ -0.71
LCA5-203ENST00000467898 BRD1O95696 1058 aa10.64□□□□□ -0.71
LCA5-203ENST00000467898 PKP1Q13835 747 aa10.64□□□□□ -0.71
LCA5-203ENST00000467898 IQCB1Q15051 598 aa10.64□□□□□ -0.71
LCA5-203ENST00000467898 NUTM2FA1L443 756 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 NBPF7P0C2Y1 421 aaPredicted RBP10.63□□□□□ -0.71
LCA5-203ENST00000467898 CLNS1AP54105 237 aaKnown RBP10.63□□□□□ -0.71
LCA5-203ENST00000467898 CEP112Q8N8E3 955 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 PARD3BQ8TEW8 1205 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 ARPC5LQ9BPX5 153 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 MAP2K7O14733 419 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 AHCYL1O43865 530 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 ST18O60284 1047 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 KCNA6P17658 529 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 MFN1Q8IWA4 741 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 GPR161Q8N6U8 529 aaKnown RBP10.63□□□□□ -0.71
LCA5-203ENST00000467898 MIPOL1Q8TD10 442 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 TRIM7Q9C029 511 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 KIF9Q9HAQ2 790 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 PDLIM1O00151 329 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 AP5Z1O43299 807 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 HMOX1P09601 288 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 EXOSC9Q06265 439 aaKnown RBP10.63□□□□□ -0.71
LCA5-203ENST00000467898 NFE2L2Q16236 605 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 FOXR1Q6PIV2 292 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 CCDC50Q8IVM0 306 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 ATL2Q8NHH9 583 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 TDRD7Q8NHU6 1098 aaKnown RBP10.63□□□□□ -0.71
LCA5-203ENST00000467898 FUT8Q9BYC5 575 aa10.63□□□□□ -0.71
LCA5-203ENST00000467898 PEX19P40855 299 aa10.62□□□□□ -0.71
LCA5-203ENST00000467898 ACBD5Q5T8D3 534 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms