RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MED23Q9ULK4 1368 aa22.11■■□□□ 1.13
TRIM56-203ENST00000467847 CACNA1FO60840 1977 aa22.1■■□□□ 1.13
TRIM56-203ENST00000467847 FAM155AB1AL88 458 aaPredicted RBP22.1■■□□□ 1.13
TRIM56-203ENST00000467847 H7C1W4 665 aa22.1■■□□□ 1.13
TRIM56-203ENST00000467847 CDCA5Q96FF9 252 aa22.1■■□□□ 1.13
TRIM56-203ENST00000467847 MYOZ2Q9NPC6 264 aa22.1■■□□□ 1.13
TRIM56-203ENST00000467847 CCT4P50991 539 aaKnown RBP22.09■■□□□ 1.13
TRIM56-203ENST00000467847 FLIIQ13045 1269 aa22.09■■□□□ 1.13
TRIM56-203ENST00000467847 IGHMBP2P38935 993 aaKnown RBP22.08■■□□□ 1.13
TRIM56-203ENST00000467847 GCKRQ14397 625 aa22.08■■□□□ 1.13
TRIM56-203ENST00000467847 FANCIQ9NVI1 1328 aa22.07■■□□□ 1.12
TRIM56-203ENST00000467847 FKBP5Q13451 457 aaPredicted RBP22.07■■□□□ 1.12
TRIM56-203ENST00000467847 FBXW7Q969H0 707 aa22.07■■□□□ 1.12
TRIM56-203ENST00000467847 MYH16Q9H6N6 1097 aa22.07■■□□□ 1.12
TRIM56-203ENST00000467847 MRS2Q9HD23 443 aa22.07■■□□□ 1.12
TRIM56-203ENST00000467847 AKAP11Q9UKA4 1901 aa22.07■■□□□ 1.12
TRIM56-203ENST00000467847 TNRC18O15417 2968 aaPredicted RBP22.07■■□□□ 1.12
TRIM56-203ENST00000467847 ZNF646O15015 1829 aaPredicted RBP22.06■■□□□ 1.12
TRIM56-203ENST00000467847 KIF23Q02241 960 aaPredicted RBP22.06■■□□□ 1.12
TRIM56-203ENST00000467847 NCBP3Q53F19 620 aaKnown RBP22.06■■□□□ 1.12
TRIM56-203ENST00000467847 PLA2G12BQ9BX93 195 aa22.06■■□□□ 1.12
TRIM56-203ENST00000467847 PITPNM2Q9BZ72 1349 aa22.06■■□□□ 1.12
TRIM56-203ENST00000467847 SLC10A3P09131 477 aa22.05■■□□□ 1.12
TRIM56-203ENST00000467847 ITGA6P23229 1130 aa22.05■■□□□ 1.12
TRIM56-203ENST00000467847 DNAAF4Q8WXU2 420 aa22.05■■□□□ 1.12
TRIM56-203ENST00000467847 MXD3Q9BW11 206 aa22.05■■□□□ 1.12
TRIM56-203ENST00000467847 COA1Q9GZY4 146 aa22.05■■□□□ 1.12
TRIM56-203ENST00000467847 LEMD3Q9Y2U8 911 aa22.05■■□□□ 1.12
TRIM56-203ENST00000467847 PAPPA2Q9BXP8 1791 aa22.04■■□□□ 1.12
TRIM56-203ENST00000467847 DACT2Q5SW24 774 aa22.04■■□□□ 1.12
TRIM56-203ENST00000467847 OGFOD1Q8N543 542 aa22.04■■□□□ 1.12
TRIM56-203ENST00000467847 LINS1Q8NG48 757 aa22.04■■□□□ 1.12
TRIM56-203ENST00000467847 MPHOSPH8Q99549 860 aa22.04■■□□□ 1.12
TRIM56-203ENST00000467847 ANKRD2Q9GZV1 360 aa22.04■■□□□ 1.12
TRIM56-203ENST00000467847 SAGE1Q9NXZ1 904 aa22.04■■□□□ 1.12
TRIM56-203ENST00000467847 CASP7P55210 303 aa22.03■■□□□ 1.12
TRIM56-203ENST00000467847 SOX10P56693 466 aa22.03■■□□□ 1.12
TRIM56-203ENST00000467847 FKBP1BP68106 108 aa22.03■■□□□ 1.12
TRIM56-203ENST00000467847 STRIP1Q5VSL9 837 aa22.03■■□□□ 1.12
TRIM56-203ENST00000467847 TXNRD3Q86VQ6 643 aa22.03■■□□□ 1.12
TRIM56-203ENST00000467847 SCAF8Q9UPN6 1271 aaKnown RBP22.03■■□□□ 1.12
TRIM56-203ENST00000467847 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
TRIM56-203ENST00000467847 ZNF804BA4D1E1 1349 aa22.03■■□□□ 1.12
TRIM56-203ENST00000467847 MYO3BQ8WXR4 1341 aa22.03■■□□□ 1.12
TRIM56-203ENST00000467847 NBPF9Q3BBW0 867 aa22.02■■□□□ 1.12
TRIM56-203ENST00000467847 CSF1RP07333 972 aa22.01■■□□□ 1.11
TRIM56-203ENST00000467847 KLRK1P26718 216 aa22.01■■□□□ 1.11
TRIM56-203ENST00000467847 KCNJ4P48050 445 aa22.01■■□□□ 1.11
TRIM56-203ENST00000467847 WDR63Q8IWG1 891 aa22.01■■□□□ 1.11
TRIM56-203ENST00000467847 RNF186Q9NXI6 227 aa22.01■■□□□ 1.11
TRIM56-203ENST00000467847 VAMP4O75379 141 aa22■■□□□ 1.11
TRIM56-203ENST00000467847 TRPA1O75762 1119 aa22■■□□□ 1.11
TRIM56-203ENST00000467847 EXOSC9Q06265 439 aaKnown RBP22■■□□□ 1.11
TRIM56-203ENST00000467847 RASAL3Q86YV0 1011 aa22■■□□□ 1.11
TRIM56-203ENST00000467847 CSRNP1Q96S65 589 aa22■■□□□ 1.11
TRIM56-203ENST00000467847 ANKRD18BA2A2Z9 1011 aa21.99■■□□□ 1.11
TRIM56-203ENST00000467847 ANP32CO43423 234 aa21.99■■□□□ 1.11
TRIM56-203ENST00000467847 CHRNDQ07001 517 aa21.99■■□□□ 1.11
TRIM56-203ENST00000467847 PRAMEF18Q5VWM3 479 aa21.99■■□□□ 1.11
TRIM56-203ENST00000467847 TTLL5Q6EMB2 1281 aa21.99■■□□□ 1.11
TRIM56-203ENST00000467847 WNT10BO00744 389 aa21.98■■□□□ 1.11
TRIM56-203ENST00000467847 MOB2Q70IA6 237 aa21.98■■□□□ 1.11
TRIM56-203ENST00000467847 REM2Q8IYK8 340 aaPredicted RBP21.98■■□□□ 1.11
TRIM56-203ENST00000467847 SASH1O94885 1247 aa21.97■■□□□ 1.11
TRIM56-203ENST00000467847 MMP14P50281 582 aa21.97■■□□□ 1.11
TRIM56-203ENST00000467847 TTLL12Q14166 644 aaPredicted RBP21.97■■□□□ 1.11
TRIM56-203ENST00000467847 KIAA0825Q8IV33 1275 aa21.97■■□□□ 1.11
TRIM56-203ENST00000467847 A0A1B0GUL6 1792 aa21.97■■□□□ 1.11
TRIM56-203ENST00000467847 F6X3S4 739 aa21.96■■□□□ 1.11
TRIM56-203ENST00000467847 UBE2Q2LH0YL09 131 aa21.96■■□□□ 1.11
TRIM56-203ENST00000467847 GTF2IP78347 998 aa21.96■■□□□ 1.11
TRIM56-203ENST00000467847 IFIT5Q13325 482 aaKnown RBP21.96■■□□□ 1.11
TRIM56-203ENST00000467847 HDAC9Q9UKV0 1011 aa21.96■■□□□ 1.11
TRIM56-203ENST00000467847 CHMP3Q9Y3E7 222 aa21.96■■□□□ 1.11
TRIM56-203ENST00000467847 PDE4DIPQ5VU43 2346 aa21.95■■□□□ 1.1
TRIM56-203ENST00000467847 NF2P35240 595 aa21.95■■□□□ 1.1
TRIM56-203ENST00000467847 FOXO4P98177 505 aa21.95■■□□□ 1.1
TRIM56-203ENST00000467847 PRPF38BQ5VTL8 546 aaKnown RBP21.95■■□□□ 1.1
TRIM56-203ENST00000467847 TAF5LO75529 589 aa21.94■■□□□ 1.1
TRIM56-203ENST00000467847 BEND3Q5T5X7 828 aa21.94■■□□□ 1.1
TRIM56-203ENST00000467847 CD209Q9NNX6 404 aa21.94■■□□□ 1.1
TRIM56-203ENST00000467847 APOBEC3FQ8IUX4 373 aaKnown RBP21.93■■□□□ 1.1
TRIM56-203ENST00000467847 HELBQ8NG08 1087 aaPredicted RBP21.93■■□□□ 1.1
TRIM56-203ENST00000467847 SPINK5Q9NQ38 1064 aaPredicted RBP21.93■■□□□ 1.1
TRIM56-203ENST00000467847 SNAP23O00161 211 aa21.92■■□□□ 1.1
TRIM56-203ENST00000467847 IRS2Q9Y4H2 1338 aa21.91■■□□□ 1.1
TRIM56-203ENST00000467847 LMBR1LQ6UX01 489 aa21.91■■□□□ 1.1
TRIM56-203ENST00000467847 C15orf52Q6ZUT6 534 aaKnown RBP21.91■■□□□ 1.1
TRIM56-203ENST00000467847 CTU1Q7Z7A3 348 aaKnown RBP21.91■■□□□ 1.1
TRIM56-203ENST00000467847 GRM8O00222 908 aa21.9■■□□□ 1.1
TRIM56-203ENST00000467847 CCDC57Q2TAC2 916 aa21.9■■□□□ 1.1
TRIM56-203ENST00000467847 ZNF804AQ7Z570 1209 aa21.9■■□□□ 1.1
TRIM56-203ENST00000467847 ZBED3Q96IU2 234 aaPredicted RBP21.9■■□□□ 1.1
TRIM56-203ENST00000467847 ECM29Q5VYK3 1845 aa21.9■■□□□ 1.1
TRIM56-203ENST00000467847 ZNF316A6NFI3 1004 aaPredicted RBP21.89■■□□□ 1.09
TRIM56-203ENST00000467847 ZEB1P37275 1124 aaPredicted RBP21.89■■□□□ 1.09
TRIM56-203ENST00000467847 PRKG1Q13976 671 aa21.89■■□□□ 1.09
TRIM56-203ENST00000467847 DLGAP5Q15398 846 aa21.89■■□□□ 1.09
TRIM56-203ENST00000467847 TAF7LQ5H9L4 462 aa21.89■■□□□ 1.09
TRIM56-203ENST00000467847 EPHA10Q5JZY3 1008 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms