RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SPACA7Q96KW9 195 aa6.38□□□□□ -1.39
VPS13A-209ENST00000467124 OXCT2Q9BYC2 517 aaPredicted RBP6.38□□□□□ -1.39
VPS13A-209ENST00000467124 SRA1Q9HD15 236 aaKnown RBP6.38□□□□□ -1.39
VPS13A-209ENST00000467124 PPP4R2Q9NY27 417 aa6.38□□□□□ -1.39
VPS13A-209ENST00000467124 PRKAG2Q9UGJ0 569 aa6.38□□□□□ -1.39
VPS13A-209ENST00000467124 PPM1HQ9ULR3 514 aa6.38□□□□□ -1.39
VPS13A-209ENST00000467124 USP31Q70CQ4 1352 aa6.38□□□□□ -1.39
VPS13A-209ENST00000467124 MINDY4BA8MYZ0 360 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 J3QW42 95 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 SF3A1Q15459 793 aaKnown RBP6.37□□□□□ -1.39
VPS13A-209ENST00000467124 SYT9Q86SS6 491 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 ZNF654Q8IZM8 581 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 GLIS3Q8NEA6 775 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 CNTNAP3BQ96NU0 1288 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 ZKSCAN3Q9BRR0 538 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 CNTNAP3Q9BZ76 1288 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 RBSNQ9H1K0 784 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 LIN7BQ9HAP6 207 aa6.37□□□□□ -1.39
VPS13A-209ENST00000467124 ADARB2-AS1A8MUL3 147 aa6.36□□□□□ -1.39
VPS13A-209ENST00000467124 GTF2F1P35269 517 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS13A-209ENST00000467124 CTBSQ01459 385 aa6.36□□□□□ -1.39
VPS13A-209ENST00000467124 PTPN12Q05209 780 aaKnown RBP6.36□□□□□ -1.39
VPS13A-209ENST00000467124 SPRED3Q2MJR0 410 aa6.36□□□□□ -1.39
VPS13A-209ENST00000467124 TPTE2Q6XPS3 522 aa6.36□□□□□ -1.39
VPS13A-209ENST00000467124 DTHD1Q6ZMT9 781 aa6.36□□□□□ -1.39
VPS13A-209ENST00000467124 C3orf58Q8NDZ4 430 aa6.36□□□□□ -1.39
VPS13A-209ENST00000467124 OSMRQ99650 979 aa6.36□□□□□ -1.39
VPS13A-209ENST00000467124 BHLHE41Q9C0J9 482 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-209ENST00000467124 KBTBD4Q9NVX7 518 aa6.36□□□□□ -1.39
VPS13A-209ENST00000467124 GDF2Q9UK05 429 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-209ENST00000467124 PAK2Q13177 524 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 GAS6Q14393 721 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 CCDC85BQ15834 202 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-209ENST00000467124 SLCO4C1Q6ZQN7 724 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 CCNJLQ8IV13 435 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 GOLGA6L1Q8N7Z2 621 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 CEP120Q8N960 986 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 TMEM102Q8N9M5 508 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-209ENST00000467124 SLC16A10Q8TF71 515 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 UBXN4Q92575 508 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 TCF12Q99081 682 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 UBE2OQ9C0C9 1292 aaKnown RBP6.35□□□□□ -1.39
VPS13A-209ENST00000467124 ABCB6Q9NP58 842 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 FRRS1LQ9P0K9 344 aa6.35□□□□□ -1.39
VPS13A-209ENST00000467124 LOC102724428A0A0B4J2F2 783 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 TMEM238LA0A1B0GVL6 79 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 GHRHP01286 108 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 GRIA4P48058 902 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 ZNF157P51786 506 aaPredicted RBP6.34□□□□□ -1.39
VPS13A-209ENST00000467124 SIK1P57059 783 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 ATP11AP98196 1134 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 GNL2Q13823 731 aaKnown RBP6.34□□□□□ -1.39
VPS13A-209ENST00000467124 CACTIN-AS1Q8N1I8 211 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 ASAP3Q8TDY4 903 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 MDFIQ99750 246 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 DZANK1Q9NVP4 752 aa6.34□□□□□ -1.39
VPS13A-209ENST00000467124 DNAJB12Q9NXW2 375 aaKnown RBP6.34□□□□□ -1.39
VPS13A-209ENST00000467124 C2CD2LO14523 706 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 CELA3AP09093 270 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 ATP2B1P20020 1258 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 GBP2P32456 591 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-209ENST00000467124 ADH7P40394 386 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 MAP3K10Q02779 954 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 SRSF11Q05519 484 aaKnown RBP6.33□□□□□ -1.4
VPS13A-209ENST00000467124 FAM160A1Q05DH4 1040 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 RPS26P11Q5JNZ5 115 aaPredicted RBP6.33□□□□□ -1.4
VPS13A-209ENST00000467124 ERMP1Q7Z2K6 904 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 PMFBP1Q8TBY8 1022 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 IRF7Q92985 503 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 NOC4LQ9BVI4 516 aaKnown RBP6.33□□□□□ -1.4
VPS13A-209ENST00000467124 PBX4Q9BYU1 374 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 LRRC4BQ9NT99 713 aa6.33□□□□□ -1.4
VPS13A-209ENST00000467124 ELOA3CA0A087WX78 387 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-209ENST00000467124 ELOA3DA6NLF2 546 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-209ENST00000467124 ZBTB42B2RXF5 422 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 TERTO14746 1132 aaKnown RBP6.32□□□□□ -1.4
VPS13A-209ENST00000467124 EIF4EBP3O60516 100 aaPredicted RBP6.32□□□□□ -1.4
VPS13A-209ENST00000467124 SMNDC1O75940 238 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS13A-209ENST00000467124 ITPKAP23677 461 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 ARID5AQ03989 594 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 NFX1Q12986 1120 aaKnown RBP6.32□□□□□ -1.4
VPS13A-209ENST00000467124 ELOA3BQ3SY89 546 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 KANK3Q6NY19 840 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 ELOA3Q8NG57 546 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 TTC9Q92623 222 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 RASSF4Q9H2L5 321 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 ADAMTS1Q9UHI8 967 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 SLC6A14Q9UN76 642 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 TLR6Q9Y2C9 796 aa6.32□□□□□ -1.4
VPS13A-209ENST00000467124 PDE2AO00408 941 aaPredicted RBP6.31□□□□□ -1.4
VPS13A-209ENST00000467124 RLBP1P12271 317 aa6.31□□□□□ -1.4
VPS13A-209ENST00000467124 EIF2AK2P19525 551 aaKnown RBP6.31□□□□□ -1.4
VPS13A-209ENST00000467124 PCBP4P57723 403 aaKnown RBP6.31□□□□□ -1.4
VPS13A-209ENST00000467124 RELL1Q8IUW5 271 aa6.31□□□□□ -1.4
VPS13A-209ENST00000467124 SLC43A3Q8NBI5 491 aa6.31□□□□□ -1.4
VPS13A-209ENST00000467124 SPON2Q9BUD6 331 aa6.31□□□□□ -1.4
VPS13A-209ENST00000467124 CEP44Q9C0F1 390 aa6.31□□□□□ -1.4
VPS13A-209ENST00000467124 IGF1RP08069 1367 aa6.31□□□□□ -1.4
VPS13A-209ENST00000467124 NFKBIEO00221 500 aa6.3□□□□□ -1.4
VPS13A-209ENST00000467124 CPB1P15086 417 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms