RNA–Protein interactions for RNA: ENST00000467078.5

APBB3-206, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 1,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-206ENST00000467078 SCARF1Q14162 830 aa19.08■□□□□ 0.65
APBB3-206ENST00000467078 ZMYM1Q5SVZ6 1142 aa19.08■□□□□ 0.65
APBB3-206ENST00000467078 LPIN2Q92539 896 aa19.08■□□□□ 0.65
APBB3-206ENST00000467078 TTC14Q96N46 770 aa19.08■□□□□ 0.65
APBB3-206ENST00000467078 SETDB2Q96T68 719 aa19.08■□□□□ 0.65
APBB3-206ENST00000467078 SEC62Q99442 399 aaKnown RBP19.08■□□□□ 0.65
APBB3-206ENST00000467078 NYXQ9GZU5 481 aa19.08■□□□□ 0.65
APBB3-206ENST00000467078 LRRC4BQ9NT99 713 aa19.08■□□□□ 0.65
APBB3-206ENST00000467078 COL4A1P02462 1669 aa19.08■□□□□ 0.64
APBB3-206ENST00000467078 ZKSCAN1P17029 563 aaPredicted RBP19.08■□□□□ 0.64
APBB3-206ENST00000467078 FKBP4Q02790 459 aaKnown RBP eCLIP19.08■□□□□ 0.64
APBB3-206ENST00000467078 HELBQ8NG08 1087 aaPredicted RBP19.08■□□□□ 0.64
APBB3-206ENST00000467078 LMBRD1Q9NUN5 540 aa19.08■□□□□ 0.64
APBB3-206ENST00000467078 SLC27A2O14975 620 aa19.07■□□□□ 0.64
APBB3-206ENST00000467078 RNF113AO15541 343 aaKnown RBP19.07■□□□□ 0.64
APBB3-206ENST00000467078 CUL4AQ13619 759 aa19.07■□□□□ 0.64
APBB3-206ENST00000467078 PPP1R9BQ96SB3 815 aa19.07■□□□□ 0.64
APBB3-206ENST00000467078 ZAP70P43403 619 aa19.06■□□□□ 0.64
APBB3-206ENST00000467078 LRRFIP1Q32MZ4 808 aaKnown RBP19.06■□□□□ 0.64
APBB3-206ENST00000467078 RNF20Q5VTR2 975 aa19.06■□□□□ 0.64
APBB3-206ENST00000467078 MCTP1Q6DN14 999 aa19.06■□□□□ 0.64
APBB3-206ENST00000467078 CCDC129Q6ZRS4 1044 aa19.06■□□□□ 0.64
APBB3-206ENST00000467078 C3orf67Q6ZVT6 689 aa19.06■□□□□ 0.64
APBB3-206ENST00000467078 CDC5LQ99459 802 aaKnown RBP19.06■□□□□ 0.64
APBB3-206ENST00000467078 MCAMP43121 646 aa19.06■□□□□ 0.64
APBB3-206ENST00000467078 ADCK5Q3MIX3 580 aa19.06■□□□□ 0.64
APBB3-206ENST00000467078 TRAPPC3LQ5T215 181 aa19.06■□□□□ 0.64
APBB3-206ENST00000467078 TRIM44Q96DX7 344 aaPredicted RBP19.06■□□□□ 0.64
APBB3-206ENST00000467078 ZSWIM6Q9HCJ5 1215 aa19.06■□□□□ 0.64
APBB3-206ENST00000467078 SLC5A1P13866 664 aa19.05■□□□□ 0.64
APBB3-206ENST00000467078 CASTP20810 708 aaKnown RBP19.05■□□□□ 0.64
APBB3-206ENST00000467078 GTF2E1P29083 439 aaPredicted RBP19.05■□□□□ 0.64
APBB3-206ENST00000467078 ARID4AP29374 1257 aaPredicted RBP19.05■□□□□ 0.64
APBB3-206ENST00000467078 RFC4P35249 363 aa19.05■□□□□ 0.64
APBB3-206ENST00000467078 NASPP49321 788 aaPredicted RBP19.05■□□□□ 0.64
APBB3-206ENST00000467078 TSGA10IPQ3SY00 556 aa19.05■□□□□ 0.64
APBB3-206ENST00000467078 ZGPATQ8N5A5 531 aaKnown RBP19.05■□□□□ 0.64
APBB3-206ENST00000467078 JAKMIP1Q96N16 626 aaKnown RBP19.05■□□□□ 0.64
APBB3-206ENST00000467078 HMG20BQ9P0W2 317 aa19.05■□□□□ 0.64
APBB3-206ENST00000467078 ZFYP08048 801 aaPredicted RBP19.04■□□□□ 0.64
APBB3-206ENST00000467078 UQCRFS1P1P0C7P4 283 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 PKP1Q13835 747 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 SLFNL1Q499Z3 407 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 SLC27A3Q5K4L6 730 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 CCDC102BQ68D86 513 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
APBB3-206ENST00000467078 RPAP1Q9BWH6 1393 aaPredicted RBP19.04■□□□□ 0.64
APBB3-206ENST00000467078 ADRA2BP18089 450 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 PHKA1P46020 1223 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 PI16Q6UXB8 463 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 NBPF5PQ86XG9 351 aaPredicted RBP19.04■□□□□ 0.64
APBB3-206ENST00000467078 ZDHHC9Q9Y397 364 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 CYP46A1Q9Y6A2 500 aa19.04■□□□□ 0.64
APBB3-206ENST00000467078 DOCK2Q92608 1830 aa19.03■□□□□ 0.64
APBB3-206ENST00000467078 TRIM37O94972 964 aa19.03■□□□□ 0.64
APBB3-206ENST00000467078 RBM6P78332 1123 aaKnown RBP19.03■□□□□ 0.64
APBB3-206ENST00000467078 ZNF772Q68DY9 489 aaPredicted RBP19.03■□□□□ 0.64
APBB3-206ENST00000467078 TPTE2Q6XPS3 522 aa19.03■□□□□ 0.64
APBB3-206ENST00000467078 INTS4Q96HW7 963 aaKnown RBP19.03■□□□□ 0.64
APBB3-206ENST00000467078 LAMA4Q16363 1823 aa19.03■□□□□ 0.64
APBB3-206ENST00000467078 MAST3O60307 1309 aa19.02■□□□□ 0.64
APBB3-206ENST00000467078 PHF14O94880 888 aa19.02■□□□□ 0.64
APBB3-206ENST00000467078 PSMA5P28066 241 aa19.02■□□□□ 0.64
APBB3-206ENST00000467078 AK2P54819 239 aa19.02■□□□□ 0.64
APBB3-206ENST00000467078 CHRNDQ07001 517 aa19.02■□□□□ 0.64
APBB3-206ENST00000467078 VPS53Q5VIR6 699 aa19.02■□□□□ 0.64
APBB3-206ENST00000467078 NOL8Q76FK4 1167 aaKnown RBP19.02■□□□□ 0.64
APBB3-206ENST00000467078 RUFY3Q7L099 469 aa19.02■□□□□ 0.64
APBB3-206ENST00000467078 ANKRD18AQ8IVF6 992 aa19.02■□□□□ 0.64
APBB3-206ENST00000467078 EP400Q96L91 3159 aa19.02■□□□□ 0.64
APBB3-206ENST00000467078 CPA1P15085 419 aa19.02■□□□□ 0.63
APBB3-206ENST00000467078 ZSCAN23Q3MJ62 389 aa19.02■□□□□ 0.63
APBB3-206ENST00000467078 DSCC1Q9BVC3 393 aa19.02■□□□□ 0.63
APBB3-206ENST00000467078 SNAP23O00161 211 aa19.01■□□□□ 0.63
APBB3-206ENST00000467078 TTF1Q15361 905 aaPredicted RBP19.01■□□□□ 0.63
APBB3-206ENST00000467078 OSBP2Q969R2 916 aa19.01■□□□□ 0.63
APBB3-206ENST00000467078 NLRP3Q96P20 1036 aa19.01■□□□□ 0.63
APBB3-206ENST00000467078 PDRG1Q9NUG6 133 aa19.01■□□□□ 0.63
APBB3-206ENST00000467078 BSDC1Q9NW68 430 aaPredicted RBP19.01■□□□□ 0.63
APBB3-206ENST00000467078 LIMCH1Q9UPQ0 1083 aa19■□□□□ 0.63
APBB3-206ENST00000467078 TAF6LQ9Y6J9 622 aa19■□□□□ 0.63
APBB3-206ENST00000467078 M0R2C6 588 aa19■□□□□ 0.63
APBB3-206ENST00000467078 KRT32Q14532 448 aa19■□□□□ 0.63
APBB3-206ENST00000467078 CAVIN1Q6NZI2 390 aaKnown RBP19■□□□□ 0.63
APBB3-206ENST00000467078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.99■□□□□ 0.63
APBB3-206ENST00000467078 APPBP2Q92624 585 aa18.99■□□□□ 0.63
APBB3-206ENST00000467078 ANP32BQ92688 251 aaKnown RBP18.99■□□□□ 0.63
APBB3-206ENST00000467078 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.99■□□□□ 0.636e-7■■■□□ 19.1
APBB3-206ENST00000467078 TNRC6CQ9HCJ0 1690 aaKnown RBP18.99■□□□□ 0.63
APBB3-206ENST00000467078 CARMIL3Q8ND23 1372 aa18.98■□□□□ 0.63
APBB3-206ENST00000467078 HSPD1P10809 573 aaKnown RBP18.98■□□□□ 0.63
APBB3-206ENST00000467078 NFIXQ14938 502 aa18.98■□□□□ 0.63
APBB3-206ENST00000467078 ZSCAN25Q6NSZ9 544 aa18.98■□□□□ 0.63
APBB3-206ENST00000467078 ALDH8A1Q9H2A2 487 aaPredicted RBP18.98■□□□□ 0.63
APBB3-206ENST00000467078 PIH1D3Q9NQM4 214 aaKnown RBP18.98■□□□□ 0.63
APBB3-206ENST00000467078 CYP21A2P08686 494 aa18.98■□□□□ 0.63
APBB3-206ENST00000467078 WASHC4Q2M389 1173 aa18.98■□□□□ 0.63
APBB3-206ENST00000467078 BLOC1S2Q6QNY1 142 aa18.98■□□□□ 0.63
APBB3-206ENST00000467078 CELF1Q92879 486 aaKnown RBP18.98■□□□□ 0.63
APBB3-206ENST00000467078 BRD1O95696 1058 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms