RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
SNED1-208ENST00000466618 SEC31BQ9NQW1 1179 aa18.42■□□□□ 0.54
SNED1-208ENST00000466618 ANKRD31Q8N7Z5 1873 aa18.42■□□□□ 0.54
SNED1-208ENST00000466618 HMMRO75330 724 aa18.42■□□□□ 0.54
SNED1-208ENST00000466618 LETM1O95202 739 aaPredicted RBP18.42■□□□□ 0.54
SNED1-208ENST00000466618 SRGNP10124 158 aa18.42■□□□□ 0.54
SNED1-208ENST00000466618 HOXA10P31260 410 aaPredicted RBP18.42■□□□□ 0.54
SNED1-208ENST00000466618 DNTTIP2Q5QJE6 756 aaKnown RBP18.42■□□□□ 0.54
SNED1-208ENST00000466618 USP26Q9BXU7 913 aa18.42■□□□□ 0.54
SNED1-208ENST00000466618 IFIT5Q13325 482 aaKnown RBP18.41■□□□□ 0.54
SNED1-208ENST00000466618 CCDC57Q2TAC2 916 aa18.41■□□□□ 0.54
SNED1-208ENST00000466618 COPRSQ9NQ92 184 aa18.41■□□□□ 0.54
SNED1-208ENST00000466618 CHMP3Q9Y3E7 222 aa18.41■□□□□ 0.54
SNED1-208ENST00000466618 SRCAPQ6ZRS2 3230 aa18.4■□□□□ 0.54
SNED1-208ENST00000466618 ANKRD18BA2A2Z9 1011 aa18.4■□□□□ 0.54
SNED1-208ENST00000466618 KLHDC4Q8TBB5 520 aa18.4■□□□□ 0.54
SNED1-208ENST00000466618 MBD3O95983 291 aa18.4■□□□□ 0.54
SNED1-208ENST00000466618 NOLC1Q14978 699 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNED1-208ENST00000466618 TSPY26PQ9H489 355 aa18.4■□□□□ 0.54
SNED1-208ENST00000466618 DCTPP1Q9H773 170 aa18.4■□□□□ 0.54
SNED1-208ENST00000466618 PA2G4Q9UQ80 394 aaKnown RBP18.4■□□□□ 0.54
SNED1-208ENST00000466618 ZNF594Q96JF6 807 aaPredicted RBP18.39■□□□□ 0.53
SNED1-208ENST00000466618 COL4A1P02462 1669 aa18.39■□□□□ 0.53
SNED1-208ENST00000466618 MYH3P11055 1940 aa18.38■□□□□ 0.53
SNED1-208ENST00000466618 NPR1P16066 1061 aa18.38■□□□□ 0.53
SNED1-208ENST00000466618 DDX46Q7L014 1031 aaKnown RBP18.38■□□□□ 0.53
SNED1-208ENST00000466618 CELF1Q92879 486 aaKnown RBP18.38■□□□□ 0.53
SNED1-208ENST00000466618 CRAMP1Q96RY5 1269 aa18.38■□□□□ 0.53
SNED1-208ENST00000466618 CD2APQ9Y5K6 639 aa18.38■□□□□ 0.53
SNED1-208ENST00000466618 KIF13BQ9NQT8 1826 aa18.38■□□□□ 0.53
SNED1-208ENST00000466618 C2CD5Q86YS7 1000 aa18.38■□□□□ 0.53
SNED1-208ENST00000466618 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
SNED1-208ENST00000466618 ZNF830Q96NB3 372 aaPredicted RBP18.38■□□□□ 0.53
SNED1-208ENST00000466618 H0YIN7 160 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 KCNA3P22001 575 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 CHRNA5P30532 468 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 TGFB2P61812 414 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 PLEKHM2Q8IWE5 1019 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 MASTLQ96GX5 879 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 RBM17Q96I25 401 aaKnown RBP18.37■□□□□ 0.53
SNED1-208ENST00000466618 CDC5LQ99459 802 aaKnown RBP18.37■□□□□ 0.53
SNED1-208ENST00000466618 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 KIF3AQ9Y496 699 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 GRAPQ13588 217 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 STYK1Q6J9G0 422 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 GRAPLQ8TC17 118 aaPredicted RBP18.37■□□□□ 0.53
SNED1-208ENST00000466618 BBXQ8WY36 941 aaPredicted RBP18.37■□□□□ 0.53
SNED1-208ENST00000466618 LRP5O75197 1615 aa18.37■□□□□ 0.53
SNED1-208ENST00000466618 SURF6O75683 361 aaKnown RBP18.36■□□□□ 0.53
SNED1-208ENST00000466618 RPS8P62241 208 aaKnown RBP18.36■□□□□ 0.53
SNED1-208ENST00000466618 ATG9AQ7Z3C6 839 aa18.36■□□□□ 0.53
SNED1-208ENST00000466618 C17orf53Q8N3J3 647 aaPredicted RBP18.36■□□□□ 0.53
SNED1-208ENST00000466618 SPTLC3Q9NUV7 552 aa18.36■□□□□ 0.53
SNED1-208ENST00000466618 CIAO1O76071 339 aa18.35■□□□□ 0.53
SNED1-208ENST00000466618 MPNDQ8N594 471 aa18.35■□□□□ 0.53
SNED1-208ENST00000466618 PUS3Q9BZE2 481 aaKnown RBP18.35■□□□□ 0.53
SNED1-208ENST00000466618 EXOC6BQ9Y2D4 811 aa18.35■□□□□ 0.53
SNED1-208ENST00000466618 COL11A2P13942 1736 aaPredicted RBP18.35■□□□□ 0.53
SNED1-208ENST00000466618 EYA2O00167 538 aa18.35■□□□□ 0.53
SNED1-208ENST00000466618 ST18O60284 1047 aa18.35■□□□□ 0.53
SNED1-208ENST00000466618 LRRC24Q50LG9 513 aa18.35■□□□□ 0.53
SNED1-208ENST00000466618 TTC22Q5TAA0 569 aa18.35■□□□□ 0.53
SNED1-208ENST00000466618 ANKRD18AQ8IVF6 992 aa18.35■□□□□ 0.53
SNED1-208ENST00000466618 BSDC1Q9NW68 430 aaPredicted RBP18.35■□□□□ 0.53
SNED1-208ENST00000466618 RIPOR2Q9Y4F9 1068 aa18.35■□□□□ 0.53
SNED1-208ENST00000466618 DPEP1P16444 411 aa18.34■□□□□ 0.53
SNED1-208ENST00000466618 LDHAL6AQ6ZMR3 332 aa18.34■□□□□ 0.53
SNED1-208ENST00000466618 SIL1Q9H173 461 aa18.34■□□□□ 0.53
SNED1-208ENST00000466618 A0A0G2JLW4 131 aa18.34■□□□□ 0.53
SNED1-208ENST00000466618 ALDH1B1P30837 517 aa18.34■□□□□ 0.53
SNED1-208ENST00000466618 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
SNED1-208ENST00000466618 TAF7LQ5H9L4 462 aa18.34■□□□□ 0.53
SNED1-208ENST00000466618 FOXD4L5Q5VV16 416 aaPredicted RBP18.34■□□□□ 0.53
SNED1-208ENST00000466618 FOXD4L4Q8WXT5 416 aaPredicted RBP18.34■□□□□ 0.53
SNED1-208ENST00000466618 KIAA1551Q9HCM1 1747 aa18.34■□□□□ 0.53
SNED1-208ENST00000466618 SPDYE4A6NLX3 237 aa18.33■□□□□ 0.52
SNED1-208ENST00000466618 BBOX1O75936 387 aa18.33■□□□□ 0.52
SNED1-208ENST00000466618 TTC12Q9H892 705 aaPredicted RBP18.33■□□□□ 0.52
SNED1-208ENST00000466618 SASH1O94885 1247 aa18.32■□□□□ 0.52
SNED1-208ENST00000466618 HSP90AB4PQ58FF6 505 aa18.32■□□□□ 0.52
SNED1-208ENST00000466618 MPHOSPH8Q99549 860 aa18.32■□□□□ 0.52
SNED1-208ENST00000466618 RAB11FIP3O75154 756 aa18.32■□□□□ 0.52
SNED1-208ENST00000466618 BRD1O95696 1058 aa18.32■□□□□ 0.52
SNED1-208ENST00000466618 IL15P40933 162 aaPredicted RBP18.32■□□□□ 0.52
SNED1-208ENST00000466618 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNED1-208ENST00000466618 PDCL2Q8N4E4 241 aa18.32■□□□□ 0.52
SNED1-208ENST00000466618 ZNF622Q969S3 477 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNED1-208ENST00000466618 CNKSR1Q969H4 720 aa18.31■□□□□ 0.52
SNED1-208ENST00000466618 PPP1R1BQ9UD71 204 aaPredicted RBP18.31■□□□□ 0.52
SNED1-208ENST00000466618 UVSSAQ2YD98 709 aa18.31■□□□□ 0.52
SNED1-208ENST00000466618 ANKRD7Q92527 254 aa18.31■□□□□ 0.52
SNED1-208ENST00000466618 FHDC1Q9C0D6 1143 aaPredicted RBP18.31■□□□□ 0.52
SNED1-208ENST00000466618 CNNM1Q9NRU3 951 aa18.31■□□□□ 0.52
SNED1-208ENST00000466618 USP25Q9UHP3 1055 aa18.31■□□□□ 0.52
SNED1-208ENST00000466618 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.31■□□□□ 0.52
SNED1-208ENST00000466618 TMC4Q7Z404 712 aa18.3■□□□□ 0.52
SNED1-208ENST00000466618 SLC51AQ86UW1 340 aa18.3■□□□□ 0.52
SNED1-208ENST00000466618 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
SNED1-208ENST00000466618 U2AF2P26368 475 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNED1-208ENST00000466618 PDE4CQ08493 712 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms