RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 NBPF11Q86T75 865 aa19.36■□□□□ 0.69
HMGXB4-206ENST00000466438 XAGE3Q8WTP9 111 aa19.36■□□□□ 0.69
HMGXB4-206ENST00000466438 ANKIB1Q9P2G1 1089 aa19.36■□□□□ 0.69
HMGXB4-206ENST00000466438 ANGEL1Q9UNK9 670 aaKnown RBP19.36■□□□□ 0.69
HMGXB4-206ENST00000466438 MNX1P50219 401 aaPredicted RBP19.35■□□□□ 0.69
HMGXB4-206ENST00000466438 SP3Q02447 781 aa19.35■□□□□ 0.69
HMGXB4-206ENST00000466438 CRHR2Q13324 411 aa19.35■□□□□ 0.69
HMGXB4-206ENST00000466438 SLC9C1Q4G0N8 1177 aa19.35■□□□□ 0.69
HMGXB4-206ENST00000466438 SLC10A4Q96EP9 437 aa19.35■□□□□ 0.69
HMGXB4-206ENST00000466438 FAM89AQ96GI7 184 aa19.35■□□□□ 0.69
HMGXB4-206ENST00000466438 OTUD7BQ6GQQ9 843 aa19.34■□□□□ 0.69
HMGXB4-206ENST00000466438 PODNQ7Z5L7 613 aa19.34■□□□□ 0.69
HMGXB4-206ENST00000466438 OGFOD1Q8N543 542 aa19.34■□□□□ 0.69
HMGXB4-206ENST00000466438 ZNF428Q96B54 188 aa19.34■□□□□ 0.69
HMGXB4-206ENST00000466438 CAP1Q01518 475 aa19.33■□□□□ 0.68
HMGXB4-206ENST00000466438 APOBEC3FQ8IUX4 373 aaKnown RBP19.33■□□□□ 0.68
HMGXB4-206ENST00000466438 WNK4Q96J92 1243 aa19.33■□□□□ 0.68
HMGXB4-206ENST00000466438 NEFMP07197 916 aa19.32■□□□□ 0.68
HMGXB4-206ENST00000466438 COL1A1P02452 1464 aaPredicted RBP19.31■□□□□ 0.68
HMGXB4-206ENST00000466438 MAP3K11Q16584 847 aa19.31■□□□□ 0.68
HMGXB4-206ENST00000466438 PRO3102Q9H379 93 aa19.31■□□□□ 0.68
HMGXB4-206ENST00000466438 TSPYL4Q9UJ04 414 aa19.31■□□□□ 0.68
HMGXB4-206ENST00000466438 PTCH2Q9Y6C5 1203 aa19.31■□□□□ 0.68
HMGXB4-206ENST00000466438 MYO3BQ8WXR4 1341 aa19.3■□□□□ 0.68
HMGXB4-206ENST00000466438 SASH1O94885 1247 aa19.3■□□□□ 0.68
HMGXB4-206ENST00000466438 ARHGEF6Q15052 776 aa19.3■□□□□ 0.68
HMGXB4-206ENST00000466438 ISCA1Q9BUE6 129 aa19.3■□□□□ 0.68
HMGXB4-206ENST00000466438 FZD1Q9UP38 647 aa19.3■□□□□ 0.68
HMGXB4-206ENST00000466438 UNCXA6NJT0 531 aa19.29■□□□□ 0.68
HMGXB4-206ENST00000466438 IRS4O14654 1257 aaPredicted RBP19.29■□□□□ 0.68
HMGXB4-206ENST00000466438 MMP14P50281 582 aa19.29■□□□□ 0.68
HMGXB4-206ENST00000466438 DACT2Q5SW24 774 aa19.29■□□□□ 0.68
HMGXB4-206ENST00000466438 CLMNQ96JQ2 1002 aa19.29■□□□□ 0.68
HMGXB4-206ENST00000466438 XDHP47989 1333 aa19.28■□□□□ 0.68
HMGXB4-206ENST00000466438 ZNF646O15015 1829 aaPredicted RBP19.28■□□□□ 0.68
HMGXB4-206ENST00000466438 DPF3Q92784 378 aa19.28■□□□□ 0.68
HMGXB4-206ENST00000466438 SEC31BQ9NQW1 1179 aa19.28■□□□□ 0.68
HMGXB4-206ENST00000466438 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.28■□□□□ 0.68
HMGXB4-206ENST00000466438 NFE2L2Q16236 605 aa19.27■□□□□ 0.68
HMGXB4-206ENST00000466438 RTL5Q5HYW3 569 aaPredicted RBP19.27■□□□□ 0.68
HMGXB4-206ENST00000466438 PLBD2Q8NHP8 589 aa19.27■□□□□ 0.68
HMGXB4-206ENST00000466438 MXD3Q9BW11 206 aa19.27■□□□□ 0.68
HMGXB4-206ENST00000466438 TESPA1A2RU30 521 aaPredicted RBP19.26■□□□□ 0.67
HMGXB4-206ENST00000466438 PPP1R12BO60237 982 aaPredicted RBP19.26■□□□□ 0.67
HMGXB4-206ENST00000466438 MYCP01106 439 aaPredicted RBP19.26■□□□□ 0.67
HMGXB4-206ENST00000466438 ATP2B4P23634 1241 aa19.26■□□□□ 0.67
HMGXB4-206ENST00000466438 PTPN18Q99952 460 aa19.26■□□□□ 0.67
HMGXB4-206ENST00000466438 SSC5DA1L4H1 1573 aa19.26■□□□□ 0.67
HMGXB4-206ENST00000466438 A0A1W2PPC1 479 aa19.25■□□□□ 0.67
HMGXB4-206ENST00000466438 ATP5J2-PTCD1G3V325 749 aa19.25■□□□□ 0.67
HMGXB4-206ENST00000466438 STRIP1Q5VSL9 837 aa19.25■□□□□ 0.67
HMGXB4-206ENST00000466438 DEFB129Q9H1M3 183 aa19.25■□□□□ 0.67
HMGXB4-206ENST00000466438 MED23Q9ULK4 1368 aa19.24■□□□□ 0.67
HMGXB4-206ENST00000466438 WTIPA6NIX2 430 aaPredicted RBP19.24■□□□□ 0.67
HMGXB4-206ENST00000466438 PPP2R1AP30153 589 aa19.24■□□□□ 0.67
HMGXB4-206ENST00000466438 GJA5P36382 358 aa19.24■□□□□ 0.67
HMGXB4-206ENST00000466438 ZBED3Q96IU2 234 aaPredicted RBP19.24■□□□□ 0.67
HMGXB4-206ENST00000466438 HSP90B1P14625 803 aaKnown RBP19.23■□□□□ 0.67
HMGXB4-206ENST00000466438 ANKRD13DQ6ZTN6 518 aa19.23■□□□□ 0.67
HMGXB4-206ENST00000466438 SH3TC2Q8TF17 1288 aa19.23■□□□□ 0.67
HMGXB4-206ENST00000466438 FBXW7Q969H0 707 aa19.23■□□□□ 0.67
HMGXB4-206ENST00000466438 SHISA4Q96DD7 197 aa19.23■□□□□ 0.67
HMGXB4-206ENST00000466438 PLEKHF1Q96S99 279 aa19.23■□□□□ 0.67
HMGXB4-206ENST00000466438 BABAM1Q9NWV8 329 aa19.23■□□□□ 0.67
HMGXB4-206ENST00000466438 PPP2R3BQ9Y5P8 575 aa19.23■□□□□ 0.67
HMGXB4-206ENST00000466438 LAMA3Q16787 3333 aa19.23■□□□□ 0.67
HMGXB4-206ENST00000466438 TRIM28Q13263 835 aaKnown RBP19.22■□□□□ 0.67
HMGXB4-206ENST00000466438 CCDC152Q4G0S7 254 aa19.22■□□□□ 0.67
HMGXB4-206ENST00000466438 HTATIP2Q9BUP3 242 aa19.22■□□□□ 0.67
HMGXB4-206ENST00000466438 SOX1O00570 391 aaPredicted RBP19.21■□□□□ 0.67
HMGXB4-206ENST00000466438 NR2E3Q9Y5X4 410 aa19.21■□□□□ 0.67
HMGXB4-206ENST00000466438 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
HMGXB4-206ENST00000466438 IREB2P48200 963 aaKnown RBP19.2■□□□□ 0.66
HMGXB4-206ENST00000466438 ANKRD18AQ8IVF6 992 aa19.2■□□□□ 0.66
HMGXB4-206ENST00000466438 ZBTB38Q8NAP3 1195 aaPredicted RBP19.2■□□□□ 0.66
HMGXB4-206ENST00000466438 ZFYVE28Q9HCC9 887 aa19.2■□□□□ 0.66
HMGXB4-206ENST00000466438 CHPF2Q9P2E5 772 aa19.2■□□□□ 0.66
HMGXB4-206ENST00000466438 TAF1CQ15572 869 aaPredicted RBP19.19■□□□□ 0.66
HMGXB4-206ENST00000466438 SUPT20HL1Q3ZLR7 823 aa19.19■□□□□ 0.66
HMGXB4-206ENST00000466438 KIAA0825Q8IV33 1275 aa19.19■□□□□ 0.66
HMGXB4-206ENST00000466438 ANKRD13AQ8IZ07 590 aa19.19■□□□□ 0.66
HMGXB4-206ENST00000466438 NKX2-3Q8TAU0 364 aa19.19■□□□□ 0.66
HMGXB4-206ENST00000466438 LRCH3Q96II8 777 aa19.19■□□□□ 0.66
HMGXB4-206ENST00000466438 COA1Q9GZY4 146 aa19.19■□□□□ 0.66
HMGXB4-206ENST00000466438 UBE2Q1Q7Z7E8 422 aa19.18■□□□□ 0.66
HMGXB4-206ENST00000466438 MS4A4AQ96JQ5 239 aa19.18■□□□□ 0.66
HMGXB4-206ENST00000466438 ZBTB7BO15156 539 aaPredicted RBP19.17■□□□□ 0.66
HMGXB4-206ENST00000466438 ZNF804BA4D1E1 1349 aa19.17■□□□□ 0.66
HMGXB4-206ENST00000466438 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
HMGXB4-206ENST00000466438 PDE8AO60658 829 aa19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 USP2O75604 605 aaPredicted RBP19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 GNRH1P01148 92 aa19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 PRMT2P55345 433 aa19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 DLGAP5Q15398 846 aa19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 TTLL5Q6EMB2 1281 aa19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 BRI3BPQ8WY22 251 aa19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 OPTNQ96CV9 577 aa19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 ECM29Q5VYK3 1845 aa19.16■□□□□ 0.66
HMGXB4-206ENST00000466438 UNC80Q8N2C7 3258 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms