RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
RTFDC1-205ENST00000466260 LDHAL6AQ6ZMR3 332 aa12.22□□□□□ -0.45
RTFDC1-205ENST00000466260 ANKRD44Q8N8A2 993 aa12.22□□□□□ -0.45
RTFDC1-205ENST00000466260 SMC1BQ8NDV3 1235 aa12.22□□□□□ -0.45
RTFDC1-205ENST00000466260 KLHDC4Q8TBB5 520 aa12.22□□□□□ -0.45
RTFDC1-205ENST00000466260 L3MBTL3Q96JM7 780 aaPredicted RBP12.22□□□□□ -0.45
RTFDC1-205ENST00000466260 MEIS3Q99687 375 aa12.22□□□□□ -0.45
RTFDC1-205ENST00000466260 ADAMTSL1Q8N6G6 1762 aa12.22□□□□□ -0.45
RTFDC1-205ENST00000466260 MED23Q9ULK4 1368 aa12.21□□□□□ -0.45
RTFDC1-205ENST00000466260 ZNF804BA4D1E1 1349 aa12.21□□□□□ -0.45
RTFDC1-205ENST00000466260 SHTN1A0MZ66 631 aa12.21□□□□□ -0.45
RTFDC1-205ENST00000466260 EPS15P42566 896 aa12.21□□□□□ -0.45
RTFDC1-205ENST00000466260 ZKSCAN2Q63HK3 967 aa12.21□□□□□ -0.45
RTFDC1-205ENST00000466260 PUS3Q9BZE2 481 aaKnown RBP12.21□□□□□ -0.45
RTFDC1-205ENST00000466260 ANKRD2Q9GZV1 360 aa12.21□□□□□ -0.45
RTFDC1-205ENST00000466260 LRRFIP2Q9Y608 721 aaKnown RBP12.21□□□□□ -0.45
RTFDC1-205ENST00000466260 POLR2AP24928 1970 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-205ENST00000466260 HSPA6P17066 643 aa12.2□□□□□ -0.46
RTFDC1-205ENST00000466260 HTRA3P83110 453 aa12.2□□□□□ -0.46
RTFDC1-205ENST00000466260 TNIP1Q15025 636 aa12.2□□□□□ -0.46
RTFDC1-205ENST00000466260 TXNRD3Q86VQ6 643 aa12.2□□□□□ -0.46
RTFDC1-205ENST00000466260 FTSJ3Q8IY81 847 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-205ENST00000466260 TMEM57Q8N5G2 664 aa12.2□□□□□ -0.46
RTFDC1-205ENST00000466260 LEMD3Q9Y2U8 911 aa12.2□□□□□ -0.46
RTFDC1-205ENST00000466260 FSTL1Q12841 308 aa12.19□□□□□ -0.46
RTFDC1-205ENST00000466260 RABL6Q3YEC7 729 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-205ENST00000466260 LRRC24Q50LG9 513 aa12.19□□□□□ -0.46
RTFDC1-205ENST00000466260 ARHGAP45Q92619 1136 aa12.19□□□□□ -0.46
RTFDC1-205ENST00000466260 GPRC5DQ9NZD1 345 aa12.19□□□□□ -0.46
RTFDC1-205ENST00000466260 TRPM7Q96QT4 1865 aa12.19□□□□□ -0.46
RTFDC1-205ENST00000466260 METTL24Q5JXM2 366 aa12.18□□□□□ -0.46
RTFDC1-205ENST00000466260 RBM26Q5T8P6 1007 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-205ENST00000466260 MAP1SQ66K74 1059 aaPredicted RBP12.18□□□□□ -0.46
RTFDC1-205ENST00000466260 INTS3Q68E01 1043 aaKnown RBP12.18□□□□□ -0.46
RTFDC1-205ENST00000466260 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
RTFDC1-205ENST00000466260 LDHDQ86WU2 507 aa12.18□□□□□ -0.46
RTFDC1-205ENST00000466260 ITPRIPQ8IWB1 547 aa12.18□□□□□ -0.46
RTFDC1-205ENST00000466260 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
RTFDC1-205ENST00000466260 SIL1Q9H173 461 aa12.18□□□□□ -0.46
RTFDC1-205ENST00000466260 TBC1D10BQ4KMP7 808 aaPredicted RBP12.17□□□□□ -0.46
RTFDC1-205ENST00000466260 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
RTFDC1-205ENST00000466260 TRPM4Q8TD43 1214 aa12.17□□□□□ -0.46
RTFDC1-205ENST00000466260 MXD3Q9BW11 206 aa12.17□□□□□ -0.46
RTFDC1-205ENST00000466260 ADARB2Q9NS39 739 aaKnown RBP12.17□□□□□ -0.46
RTFDC1-205ENST00000466260 CNOT7Q9UIV1 285 aaKnown RBP12.17□□□□□ -0.46
RTFDC1-205ENST00000466260 JAG2Q9Y219 1238 aa12.17□□□□□ -0.46
RTFDC1-205ENST00000466260 ARAP2Q8WZ64 1704 aa12.17□□□□□ -0.46
RTFDC1-205ENST00000466260 H7C1D1 291 aa12.16□□□□□ -0.46
RTFDC1-205ENST00000466260 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
RTFDC1-205ENST00000466260 DZIP1LQ8IYY4 767 aaKnown RBP12.16□□□□□ -0.46
RTFDC1-205ENST00000466260 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
RTFDC1-205ENST00000466260 C1orf115Q9H7X2 142 aa12.16□□□□□ -0.46
RTFDC1-205ENST00000466260 PA2G4Q9UQ80 394 aaKnown RBP12.16□□□□□ -0.46
RTFDC1-205ENST00000466260 USP17L3A6NCW0 530 aa12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 USP17L4A6NCW7 530 aa12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 GNAI3P08754 354 aa12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 RLBP1P12271 317 aa12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 RFX5P48382 616 aaPredicted RBP12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 RSBN1LQ6PCB5 846 aaPredicted RBP12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 USP50Q70EL3 339 aaPredicted RBP12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 USP17L1Q7RTZ2 530 aa12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 PANK1Q8TE04 598 aa12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 COA1Q9GZY4 146 aa12.15□□□□□ -0.46
RTFDC1-205ENST00000466260 MROH5Q6ZUA9 1318 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 ECM29Q5VYK3 1845 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 EGFRP00533 1210 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 VIL1P09327 827 aaKnown RBP12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 GYG1P46976 350 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 APLP1P51693 650 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 GTF2IP78347 998 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 PTPN12Q05209 780 aaKnown RBP12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 FMR1Q06787 632 aaKnown RBP eCLIP12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 CNTROBQ8N137 903 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 CD209Q9NNX6 404 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 RCAN3Q9UKA8 241 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 IQSEC3Q9UPP2 1182 aaPredicted RBP12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 HDAC5Q9UQL6 1122 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 RIPOR2Q9Y4F9 1068 aa12.14□□□□□ -0.47
RTFDC1-205ENST00000466260 EYA2O00167 538 aa12.13□□□□□ -0.47
RTFDC1-205ENST00000466260 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
RTFDC1-205ENST00000466260 GNAI2P04899 355 aa12.13□□□□□ -0.47
RTFDC1-205ENST00000466260 RPS12P25398 132 aaKnown RBP12.13□□□□□ -0.47
RTFDC1-205ENST00000466260 HIRAP54198 1017 aaPredicted RBP12.13□□□□□ -0.47
RTFDC1-205ENST00000466260 KIF4BQ2VIQ3 1234 aa12.13□□□□□ -0.47
RTFDC1-205ENST00000466260 TTLL5Q6EMB2 1281 aa12.13□□□□□ -0.47
RTFDC1-205ENST00000466260 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
RTFDC1-205ENST00000466260 IRS2Q9Y4H2 1338 aa12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 F8W031 263 aaPredicted RBP12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 TRAF5O00463 557 aa12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 PDE8BO95263 885 aa12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 UBE4AQ14139 1066 aa12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 KIAA0825Q8IV33 1275 aa12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 DPF2Q92785 391 aa12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 GLIS2Q9BZE0 524 aaPredicted RBP12.12□□□□□ -0.47
RTFDC1-205ENST00000466260 ZNF408Q9H9D4 720 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms