RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 JARID2Q92833 1246 aaPredicted RBP17.29■□□□□ 0.36
CHD3-207ENST00000466233 MYOZ2Q9NPC6 264 aa17.29■□□□□ 0.36
CHD3-207ENST00000466233 GGA3Q9NZ52 723 aa17.29■□□□□ 0.36
CHD3-207ENST00000466233 CACNA1FO60840 1977 aa17.28■□□□□ 0.36
CHD3-207ENST00000466233 SCN9AQ15858 1988 aa17.28■□□□□ 0.36
CHD3-207ENST00000466233 FAM155AB1AL88 458 aaPredicted RBP17.28■□□□□ 0.36
CHD3-207ENST00000466233 GRM1Q13255 1194 aa17.28■□□□□ 0.36
CHD3-207ENST00000466233 FKBP5Q13451 457 aaPredicted RBP17.28■□□□□ 0.36
CHD3-207ENST00000466233 SCARF1Q14162 830 aa17.28■□□□□ 0.36
CHD3-207ENST00000466233 RBM26Q5T8P6 1007 aaKnown RBP17.28■□□□□ 0.36
CHD3-207ENST00000466233 OGFOD1Q8N543 542 aa17.28■□□□□ 0.36
CHD3-207ENST00000466233 ABHD8Q96I13 439 aa17.28■□□□□ 0.36
CHD3-207ENST00000466233 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
CHD3-207ENST00000466233 PSME4Q14997 1843 aa17.28■□□□□ 0.36
CHD3-207ENST00000466233 ITGA6P23229 1130 aa17.27■□□□□ 0.36
CHD3-207ENST00000466233 DACT2Q5SW24 774 aa17.27■□□□□ 0.36
CHD3-207ENST00000466233 C15orf52Q6ZUT6 534 aaKnown RBP17.27■□□□□ 0.36
CHD3-207ENST00000466233 MPHOSPH8Q99549 860 aa17.27■□□□□ 0.36
CHD3-207ENST00000466233 ADM5C9JUS6 153 aa17.26■□□□□ 0.35
CHD3-207ENST00000466233 MYH3P11055 1940 aa17.25■□□□□ 0.35
CHD3-207ENST00000466233 ZNF804BA4D1E1 1349 aa17.25■□□□□ 0.35
CHD3-207ENST00000466233 SLC10A3P09131 477 aa17.25■□□□□ 0.35
CHD3-207ENST00000466233 ANGEL2Q5VTE6 544 aaKnown RBP17.25■□□□□ 0.35
CHD3-207ENST00000466233 CDCA5Q96FF9 252 aa17.25■□□□□ 0.35
CHD3-207ENST00000466233 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
CHD3-207ENST00000466233 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
CHD3-207ENST00000466233 ZNF157P51786 506 aaPredicted RBP17.24■□□□□ 0.35
CHD3-207ENST00000466233 RGS19P49795 217 aa17.23■□□□□ 0.35
CHD3-207ENST00000466233 BEND3Q5T5X7 828 aa17.23■□□□□ 0.35
CHD3-207ENST00000466233 FKBP1AP62942 108 aaKnown RBP17.22■□□□□ 0.35
CHD3-207ENST00000466233 EXOSC9Q06265 439 aaKnown RBP17.22■□□□□ 0.35
CHD3-207ENST00000466233 IFIT5Q13325 482 aaKnown RBP17.22■□□□□ 0.35
CHD3-207ENST00000466233 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
CHD3-207ENST00000466233 TTLL5Q6EMB2 1281 aa17.22■□□□□ 0.35
CHD3-207ENST00000466233 HDAC9Q9UKV0 1011 aa17.22■□□□□ 0.35
CHD3-207ENST00000466233 WNT10BO00744 389 aa17.21■□□□□ 0.35
CHD3-207ENST00000466233 ALDH1L1O75891 902 aa17.21■□□□□ 0.35
CHD3-207ENST00000466233 KIF23Q02241 960 aaPredicted RBP17.21■□□□□ 0.35
CHD3-207ENST00000466233 CHRNDQ07001 517 aa17.21■□□□□ 0.35
CHD3-207ENST00000466233 DLK2Q6UY11 383 aa17.21■□□□□ 0.35
CHD3-207ENST00000466233 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
CHD3-207ENST00000466233 WTIPA6NIX2 430 aaPredicted RBP17.2■□□□□ 0.34
CHD3-207ENST00000466233 NF2P35240 595 aa17.2■□□□□ 0.34
CHD3-207ENST00000466233 FOXO4P98177 505 aa17.2■□□□□ 0.34
CHD3-207ENST00000466233 TXNRD3Q86VQ6 643 aa17.2■□□□□ 0.34
CHD3-207ENST00000466233 MTMR14Q8NCE2 650 aa17.2■□□□□ 0.34
CHD3-207ENST00000466233 ZBED3Q96IU2 234 aaPredicted RBP17.2■□□□□ 0.34
CHD3-207ENST00000466233 ZIC5Q96T25 663 aa17.2■□□□□ 0.34
CHD3-207ENST00000466233 PAPPA2Q9BXP8 1791 aa17.2■□□□□ 0.34
CHD3-207ENST00000466233 ASTN2O75129 1339 aaPredicted RBP17.2■□□□□ 0.34
CHD3-207ENST00000466233 IRS2Q9Y4H2 1338 aa17.2■□□□□ 0.34
CHD3-207ENST00000466233 UNCXA6NJT0 531 aa17.19■□□□□ 0.34
CHD3-207ENST00000466233 KCNJ4P48050 445 aa17.19■□□□□ 0.34
CHD3-207ENST00000466233 APOBEC3FQ8IUX4 373 aaKnown RBP17.19■□□□□ 0.34
CHD3-207ENST00000466233 CSRNP1Q96S65 589 aa17.19■□□□□ 0.34
CHD3-207ENST00000466233 CD209Q9NNX6 404 aa17.19■□□□□ 0.34
CHD3-207ENST00000466233 COL1A1P02452 1464 aaPredicted RBP17.18■□□□□ 0.34
CHD3-207ENST00000466233 GRM8O00222 908 aa17.18■□□□□ 0.34
CHD3-207ENST00000466233 IL1R1P14778 569 aa17.18■□□□□ 0.34
CHD3-207ENST00000466233 NBPF9Q3BBW0 867 aa17.18■□□□□ 0.34
CHD3-207ENST00000466233 NOM1Q5C9Z4 860 aaKnown RBP17.18■□□□□ 0.34
CHD3-207ENST00000466233 RASAL3Q86YV0 1011 aa17.18■□□□□ 0.34
CHD3-207ENST00000466233 RNF186Q9NXI6 227 aa17.18■□□□□ 0.34
CHD3-207ENST00000466233 TSKSQ9UJT2 592 aa17.18■□□□□ 0.34
CHD3-207ENST00000466233 CCDC57Q2TAC2 916 aa17.17■□□□□ 0.34
CHD3-207ENST00000466233 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
CHD3-207ENST00000466233 MCOLN1Q9GZU1 580 aa17.17■□□□□ 0.34
CHD3-207ENST00000466233 PPP2R3BQ9Y5P8 575 aa17.17■□□□□ 0.34
CHD3-207ENST00000466233 GTF2IP78347 998 aa17.16■□□□□ 0.34
CHD3-207ENST00000466233 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
CHD3-207ENST00000466233 ZNF521Q96K83 1311 aa17.16■□□□□ 0.34
CHD3-207ENST00000466233 F6X3S4 739 aa17.15■□□□□ 0.34
CHD3-207ENST00000466233 TM4SF4P48230 202 aa17.15■□□□□ 0.34
CHD3-207ENST00000466233 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
CHD3-207ENST00000466233 SRCIN1Q9C0H9 1055 aa17.15■□□□□ 0.34
CHD3-207ENST00000466233 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
CHD3-207ENST00000466233 UTYO14607 1347 aa17.15■□□□□ 0.34
CHD3-207ENST00000466233 ZNF646O15015 1829 aaPredicted RBP17.14■□□□□ 0.34
CHD3-207ENST00000466233 TRPA1O75762 1119 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 SASH1O94885 1247 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 KLRK1P26718 216 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 DGKZQ13574 1117 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 UBE4AQ14139 1066 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 LDHAL6AQ6ZMR3 332 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 ARMC9Q7Z3E5 817 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 KIAA0825Q8IV33 1275 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 MXD3Q9BW11 206 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 CFHR5Q9BXR6 569 aa17.14■□□□□ 0.33
CHD3-207ENST00000466233 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
CHD3-207ENST00000466233 PKN2Q16513 984 aaKnown RBP17.13■□□□□ 0.33
CHD3-207ENST00000466233 MAP3K11Q16584 847 aa17.13■□□□□ 0.33
CHD3-207ENST00000466233 LDLRAD1Q5T700 205 aa17.13■□□□□ 0.33
CHD3-207ENST00000466233 FBXW7Q969H0 707 aa17.13■□□□□ 0.33
CHD3-207ENST00000466233 CCDC85CA6NKD9 419 aa17.12■□□□□ 0.33
CHD3-207ENST00000466233 MYO1BO43795 1136 aa17.12■□□□□ 0.33
CHD3-207ENST00000466233 INHBEP58166 350 aa17.12■□□□□ 0.33
CHD3-207ENST00000466233 MLLT1Q03111 559 aaPredicted RBP17.12■□□□□ 0.33
CHD3-207ENST00000466233 TAF7LQ5H9L4 462 aa17.12■□□□□ 0.33
CHD3-207ENST00000466233 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
CHD3-207ENST00000466233 FAM205AQ6ZU69 1335 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms