RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 TLDC1Q6P9B6 456 aa10.93□□□□□ -0.66
CDHR3-203ENST00000466045 PARD3BQ8TEW8 1205 aa10.93□□□□□ -0.66
CDHR3-203ENST00000466045 HNRNPLLQ8WVV9 542 aaKnown RBP10.93□□□□□ -0.66
CDHR3-203ENST00000466045 RBM33Q96EV2 1170 aaKnown RBP10.93□□□□□ -0.66
CDHR3-203ENST00000466045 LMCD1Q9NZU5 365 aa10.93□□□□□ -0.66
CDHR3-203ENST00000466045 VPS18Q9P253 973 aa10.93□□□□□ -0.66
CDHR3-203ENST00000466045 CPS1P31327 1500 aa10.93□□□□□ -0.66
CDHR3-203ENST00000466045 KIF20BQ96Q89 1820 aa10.93□□□□□ -0.66
CDHR3-203ENST00000466045 PTPRUQ92729 1446 aa10.93□□□□□ -0.66
CDHR3-203ENST00000466045 ANKRD65E5RJM6 399 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 PES1O00541 588 aaKnown RBP10.92□□□□□ -0.66
CDHR3-203ENST00000466045 ZSCAN9O15535 394 aaPredicted RBP10.92□□□□□ -0.66
CDHR3-203ENST00000466045 LIG3P49916 1009 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 SNW1Q13573 536 aaKnown RBP10.92□□□□□ -0.66
CDHR3-203ENST00000466045 CCDC144BQ3MJ40 725 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 SARM1Q6SZW1 724 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 KIAA1328Q86T90 577 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 CCDC144CPQ8IYA2 1237 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 MAGEC3Q8TD91 643 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 LZTS2Q9BRK4 669 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 BATF3Q9NR55 127 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 DDX19BQ9UMR2 479 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 COL3A1P02461 1466 aaPredicted RBP10.92□□□□□ -0.66
CDHR3-203ENST00000466045 WDR33Q9C0J8 1336 aaKnown RBP10.92□□□□□ -0.66
CDHR3-203ENST00000466045 DLC1Q96QB1 1528 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 RTN3O95197 1032 aaPredicted RBP10.92□□□□□ -0.66
CDHR3-203ENST00000466045 DRC7Q8IY82 874 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 CD163L1Q9NR16 1453 aa10.92□□□□□ -0.66
CDHR3-203ENST00000466045 FSBPO95073 299 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 FNTAP49354 379 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 RASA3Q14644 834 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 BRD3Q15059 726 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 FILIP1LQ4L180 1135 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 HHATQ5VTY9 493 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 DZIP1LQ8IYY4 767 aaKnown RBP10.91□□□□□ -0.66
CDHR3-203ENST00000466045 C3orf20Q8ND61 904 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 FAM71BQ8TC56 605 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 MRFAP1L1Q96HT8 127 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 ACBD3Q9H3P7 528 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 KIF9Q9HAQ2 790 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 GOPCQ9HD26 462 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 SUN2Q9UH99 717 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 DNAI1Q9UI46 699 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDHR3-203ENST00000466045 RTL1A6NKG5 1358 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 TMEM94Q12767 1356 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 EPB41L2O43491 1005 aaKnown RBP10.91□□□□□ -0.66
CDHR3-203ENST00000466045 MCM6Q14566 821 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 ZKSCAN2Q63HK3 967 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 GIMAP6Q6P9H5 292 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 SAAL1Q96ER3 474 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 TRIM5Q9C035 493 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 RRP7AQ9Y3A4 280 aaKnown RBP10.91□□□□□ -0.66
CDHR3-203ENST00000466045 MSH6P52701 1360 aa10.91□□□□□ -0.66
CDHR3-203ENST00000466045 SETD1AO15047 1707 aaKnown RBP10.9□□□□□ -0.66
CDHR3-203ENST00000466045 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
CDHR3-203ENST00000466045 LONRF2Q1L5Z9 754 aa10.9□□□□□ -0.66
CDHR3-203ENST00000466045 LRRFIP1Q32MZ4 808 aaKnown RBP10.9□□□□□ -0.66
CDHR3-203ENST00000466045 DZIP3Q86Y13 1208 aaKnown RBP10.9□□□□□ -0.66
CDHR3-203ENST00000466045 OR8K1Q8NGG5 319 aa10.9□□□□□ -0.66
CDHR3-203ENST00000466045 FAM169AQ9Y6X4 670 aa10.9□□□□□ -0.66
CDHR3-203ENST00000466045 LRRC7Q96NW7 1537 aa10.9□□□□□ -0.66
CDHR3-203ENST00000466045 GOLGA6CA6NDK9 693 aa10.9□□□□□ -0.66
CDHR3-203ENST00000466045 GOLGA6BA6NDN3 693 aa10.9□□□□□ -0.66
CDHR3-203ENST00000466045 GOLGA6DP0CG33 693 aa10.9□□□□□ -0.66
CDHR3-203ENST00000466045 U2AF1L5P0DN76 240 aaPredicted RBP10.9□□□□□ -0.66
CDHR3-203ENST00000466045 CLNS1AP54105 237 aaKnown RBP10.9□□□□□ -0.66
CDHR3-203ENST00000466045 U2AF1Q01081 240 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDHR3-203ENST00000466045 RSRC2Q7L4I2 434 aaKnown RBP10.9□□□□□ -0.66
CDHR3-203ENST00000466045 FAM163AQ96GL9 167 aaPredicted RBP10.9□□□□□ -0.66
CDHR3-203ENST00000466045 GOLGA6AQ9NYA3 693 aa10.9□□□□□ -0.66
CDHR3-203ENST00000466045 SAFB2Q14151 953 aaKnown RBP eCLIP10.89□□□□□ -0.67
CDHR3-203ENST00000466045 SPATA21Q7Z572 469 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 CNNM3Q8NE01 707 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 RABGGTAQ92696 567 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 PRAM1Q96QH2 718 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 LNPKQ9C0E8 428 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 ATP6V0A4Q9HBG4 840 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 SHOX2O60902 331 aaPredicted RBP10.89□□□□□ -0.67
CDHR3-203ENST00000466045 CAVIN2O95810 425 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 INPP5BP32019 993 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 MAP3K9P80192 1104 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 CEP112Q8N8E3 955 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 ACRBPQ8NEB7 543 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 NWD1Q149M9 1564 aa10.89□□□□□ -0.67
CDHR3-203ENST00000466045 STRCP1A6NGW2 1772 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 ROBO2Q9HCK4 1378 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 FYB1O15117 783 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 PYGLP06737 847 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 USP5P45974 858 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 EVCP57679 992 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 NBPF15Q8N660 670 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 TBC1D5Q92609 795 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 EZH1Q92800 747 aaPredicted RBP10.88□□□□□ -0.67
CDHR3-203ENST00000466045 PLEKHF1Q96S99 279 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 RMI1Q9H9A7 625 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 GDPD2Q9HCC8 539 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 MYO6Q9UM54 1294 aa10.88□□□□□ -0.67
CDHR3-203ENST00000466045 CHD2O14647 1828 aaKnown RBP10.88□□□□□ -0.67
CDHR3-203ENST00000466045 MINK1Q8N4C8 1332 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms