RNA–Protein interactions for RNA: ENST00000465900.5

SND1-204, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-204ENST00000465900 ERCC5P28715 1186 aaPredicted RBP7.5□□□□□ -1.21
SND1-204ENST00000465900 HOXC9P31274 260 aa7.5□□□□□ -1.21
SND1-204ENST00000465900 EAPPQ56P03 285 aaPredicted RBP7.5□□□□□ -1.21
SND1-204ENST00000465900 DDX12PQ92771 950 aa7.5□□□□□ -1.21
SND1-204ENST00000465900 L3MBTL3Q96JM7 780 aaPredicted RBP7.5□□□□□ -1.21
SND1-204ENST00000465900 ABT1Q9ULW3 272 aaKnown RBP7.5□□□□□ -1.21
SND1-204ENST00000465900 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.5□□□□□ -1.21
SND1-204ENST00000465900 RGPD2P0DJD1 1756 aa7.5□□□□□ -1.21
SND1-204ENST00000465900 ADAMTSL1Q8N6G6 1762 aa7.5□□□□□ -1.21
SND1-204ENST00000465900 MAP3K19Q56UN5 1328 aa7.5□□□□□ -1.21
SND1-204ENST00000465900 CD163L1Q9NR16 1453 aa7.49□□□□□ -1.21
SND1-204ENST00000465900 CCDC88AQ3V6T2 1871 aa7.49□□□□□ -1.21
SND1-204ENST00000465900 KTN1Q86UP2 1357 aaKnown RBP7.49□□□□□ -1.21
SND1-204ENST00000465900 LTN1O94822 1766 aa7.49□□□□□ -1.21
SND1-204ENST00000465900 PAX3P23760 479 aa7.49□□□□□ -1.21
SND1-204ENST00000465900 RHBDL3P58872 404 aa7.49□□□□□ -1.21
SND1-204ENST00000465900 DIXDC1Q155Q3 683 aa7.49□□□□□ -1.21
SND1-204ENST00000465900 DDX21Q9NR30 783 aaKnown RBP eCLIP7.49□□□□□ -1.21
SND1-204ENST00000465900 BMP2KQ9NSY1 1161 aaPredicted RBP7.49□□□□□ -1.21
SND1-204ENST00000465900 CARMIL3Q8ND23 1372 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 BRCA2P51587 3418 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 TRAF5O00463 557 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 RFC4P35249 363 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 SLC20A2Q08357 652 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 C4orf46Q504U0 113 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 RC3H1Q5TC82 1133 aaKnown RBP7.48□□□□□ -1.21
SND1-204ENST00000465900 TTLL6Q8N841 843 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 PHOX2BQ99453 314 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 SPOCK3Q9BQ16 436 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 TMEM121BQ9BXQ6 578 aaPredicted RBP7.48□□□□□ -1.21
SND1-204ENST00000465900 RBM28Q9NW13 759 aaKnown RBP7.48□□□□□ -1.21
SND1-204ENST00000465900 GEMIN8Q9NWZ8 242 aaKnown RBP7.48□□□□□ -1.21
SND1-204ENST00000465900 LIMD1Q9UGP4 676 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 SYNPO2Q9UMS6 1093 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 TRIM35Q9UPQ4 493 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 ZNF541Q9H0D2 1346 aa7.48□□□□□ -1.21
SND1-204ENST00000465900 TLDC2A0PJX2 215 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 C21orf2O43822 256 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 ZNF500O60304 480 aaPredicted RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 HSP90AA1P07900 732 aaKnown RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 HMGB2P26583 209 aaKnown RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 MAP2K2P36507 400 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 ZRSR2Q15696 482 aaKnown RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 PUS10Q3MIT2 529 aaKnown RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 CIAPIN1Q6FI81 312 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 PHLDB3Q6NSJ2 640 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 CHRDL2Q6WN34 429 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 GET4Q7L5D6 327 aaPredicted RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 PDCD7Q8N8D1 485 aaKnown RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 LSM14AQ8ND56 463 aaKnown RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 PMM1Q92871 262 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 GCC1Q96CN9 775 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 CUEDC1Q9NWM3 386 aaPredicted RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 ABCF2Q9UG63 623 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 SWAP70Q9UH65 585 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 NDUFB9Q9Y6M9 179 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 ITGB4P16144 1822 aa7.47□□□□□ -1.21
SND1-204ENST00000465900 USP42Q9H9J4 1324 aaKnown RBP7.47□□□□□ -1.21
SND1-204ENST00000465900 MYH14Q7Z406 1995 aaKnown RBP7.46□□□□□ -1.21
SND1-204ENST00000465900 EPHX2P34913 555 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 IGBP1P78318 339 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 TSNAXIP1Q2TAA8 658 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 HSP90AB2PQ58FF8 381 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 C2CD5Q86YS7 1000 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 ALG2Q9H553 416 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 BCL2L12Q9HB09 334 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 KLHL42Q9P2K6 505 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 MAFBQ9Y5Q3 323 aaPredicted RBP7.46□□□□□ -1.22
SND1-204ENST00000465900 TLL2Q9Y6L7 1015 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 ADAMTS7Q9UKP4 1686 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 CGNL1Q0VF96 1302 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 PCDH11XQ9BZA7 1347 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 PCDH11YQ9BZA8 1340 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 CNTNAP4Q9C0A0 1308 aa7.46□□□□□ -1.22
SND1-204ENST00000465900 RANBP2P49792 3224 aaKnown RBP7.45□□□□□ -1.22
SND1-204ENST00000465900 U2SURPO15042 1029 aaKnown RBP7.45□□□□□ -1.22
SND1-204ENST00000465900 AP1G2O75843 785 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 STK10O94804 968 aaKnown RBP7.45□□□□□ -1.22
SND1-204ENST00000465900 C7P10643 843 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 TATP17735 454 aaPredicted RBP7.45□□□□□ -1.22
SND1-204ENST00000465900 ECE1P42892 770 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 ELOAQ14241 798 aaKnown RBP7.45□□□□□ -1.22
SND1-204ENST00000465900 NFIXQ14938 502 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 UVSSAQ2YD98 709 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 UTP14CQ5TAP6 766 aaKnown RBP7.45□□□□□ -1.22
SND1-204ENST00000465900 ZNF710Q8N1W2 664 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 FAM43AQ8N2R8 423 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 LARGE2Q8N3Y3 721 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 GPATCH3Q96I76 525 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 TANGO6Q9C0B7 1094 aa7.45□□□□□ -1.22
SND1-204ENST00000465900 GNL3LQ9NVN8 582 aaKnown RBP7.45□□□□□ -1.22
SND1-204ENST00000465900 BIN2Q9UBW5 565 aaPredicted RBP7.45□□□□□ -1.22
SND1-204ENST00000465900 hCG_2014768A0A024R1R8 64 aa7.44□□□□□ -1.22
SND1-204ENST00000465900 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
SND1-204ENST00000465900 FAM200BP0CF97 657 aa7.44□□□□□ -1.22
SND1-204ENST00000465900 BDNFP23560 247 aa7.44□□□□□ -1.22
SND1-204ENST00000465900 PEX19P40855 299 aa7.44□□□□□ -1.22
SND1-204ENST00000465900 GYS2P54840 703 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms