RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 ZFYVE28Q9HCC9 887 aa6.26□□□□□ -1.41
XRN1-205ENST00000465507 NPHS2Q9NP85 383 aa6.26□□□□□ -1.41
XRN1-205ENST00000465507 SH2B1Q9NRF2 756 aaPredicted RBP6.26□□□□□ -1.41
XRN1-205ENST00000465507 PNMA6FA0A0J9YX94 578 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
XRN1-205ENST00000465507 LINC01387J3KSC0 135 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 GADD45BO75293 160 aaPredicted RBP6.25□□□□□ -1.41
XRN1-205ENST00000465507 NID1P14543 1247 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 TRIM28Q13263 835 aaKnown RBP6.25□□□□□ -1.41
XRN1-205ENST00000465507 GRIK4Q16099 956 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 PRRT3Q5FWE3 981 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 MSL1Q68DK7 614 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 XKR5Q6UX68 686 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 PMEPA1Q969W9 287 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 ZKSCAN3Q9BRR0 538 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 SALL4Q9UJQ4 1053 aa6.25□□□□□ -1.41
XRN1-205ENST00000465507 SPDYE3A6NKU9 549 aa6.24□□□□□ -1.41
XRN1-205ENST00000465507 METTL12A8MUP2 240 aa6.24□□□□□ -1.41
XRN1-205ENST00000465507 EIF1AYO14602 144 aaKnown RBP6.24□□□□□ -1.41
XRN1-205ENST00000465507 CPNE3O75131 537 aaKnown RBP6.24□□□□□ -1.41
XRN1-205ENST00000465507 PLCB3Q01970 1234 aa6.24□□□□□ -1.41
XRN1-205ENST00000465507 ADAMTSL4Q6UY14 1074 aa6.24□□□□□ -1.41
XRN1-205ENST00000465507 SND1Q7KZF4 910 aaKnown RBP eCLIP6.24□□□□□ -1.41
XRN1-205ENST00000465507 ZSCAN29Q8IWY8 852 aaPredicted RBP6.24□□□□□ -1.41
XRN1-205ENST00000465507 SLC7A3Q8WY07 619 aa6.24□□□□□ -1.41
XRN1-205ENST00000465507 FAM129BQ96TA1 746 aa6.24□□□□□ -1.41
XRN1-205ENST00000465507 CARD10Q9BWT7 1032 aa6.24□□□□□ -1.41
XRN1-205ENST00000465507 PBX4Q9BYU1 374 aa6.24□□□□□ -1.41
XRN1-205ENST00000465507 PRDM6Q9NQX0 595 aa6.24□□□□□ -1.41
XRN1-205ENST00000465507 A0A0A0MRY4 1105 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 KIF4AO95239 1232 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 APBA3O96018 575 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 NEFLP07196 543 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 EDN3P14138 238 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 PI16Q6UXB8 463 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 CEP120Q8N960 986 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 DMRTB1Q96MA1 342 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 SETDB2Q96T68 719 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 POP1Q99575 1024 aaKnown RBP6.23□□□□□ -1.41
XRN1-205ENST00000465507 RBCK1Q9BYM8 510 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 FRRS1LQ9P0K9 344 aa6.23□□□□□ -1.41
XRN1-205ENST00000465507 PDE2AO00408 941 aaPredicted RBP6.22□□□□□ -1.41
XRN1-205ENST00000465507 CDC27P30260 824 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 RAC1P63000 192 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 GRIK5Q16478 980 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 RSPO4Q2I0M5 234 aaPredicted RBP6.22□□□□□ -1.41
XRN1-205ENST00000465507 SHISA2Q6UWI4 295 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 EPS8L3Q8TE67 593 aaKnown RBP6.22□□□□□ -1.41
XRN1-205ENST00000465507 CSRNP1Q96S65 589 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 EHD4Q9H223 541 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 LIN7BQ9HAP6 207 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 TPSG1Q9NRR2 321 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 DZANK1Q9NVP4 752 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 USP21Q9UK80 565 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 WWC3Q9ULE0 1092 aa6.22□□□□□ -1.41
XRN1-205ENST00000465507 PTPRAP18433 802 aa6.21□□□□□ -1.42
XRN1-205ENST00000465507 CCDC74AQ96AQ1 378 aa6.21□□□□□ -1.42
XRN1-205ENST00000465507 CITED4Q96RK1 184 aa6.21□□□□□ -1.42
XRN1-205ENST00000465507 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
XRN1-205ENST00000465507 PPME1Q9Y570 386 aa6.21□□□□□ -1.42
XRN1-205ENST00000465507 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
XRN1-205ENST00000465507 A0A1W2PP55 124 aa6.2□□□□□ -1.42
XRN1-205ENST00000465507 ANKRD33BA6NCL7 494 aa6.2□□□□□ -1.42
XRN1-205ENST00000465507 EPHA1P21709 976 aa6.2□□□□□ -1.42
XRN1-205ENST00000465507 CABP4P57796 275 aa6.2□□□□□ -1.42
XRN1-205ENST00000465507 CCDC27Q2M243 656 aa6.2□□□□□ -1.42
XRN1-205ENST00000465507 NKAPLQ5M9Q1 402 aa6.2□□□□□ -1.42
XRN1-205ENST00000465507 PEAR1Q5VY43 1037 aaPredicted RBP6.2□□□□□ -1.42
XRN1-205ENST00000465507 HOXD8P13378 290 aaPredicted RBP6.19□□□□□ -1.42
XRN1-205ENST00000465507 ZNF157P51786 506 aaPredicted RBP6.19□□□□□ -1.42
XRN1-205ENST00000465507 TRIM26Q12899 539 aaPredicted RBP6.19□□□□□ -1.42
XRN1-205ENST00000465507 SPRED3Q2MJR0 410 aa6.19□□□□□ -1.42
XRN1-205ENST00000465507 ZMYM1Q5SVZ6 1142 aa6.19□□□□□ -1.42
XRN1-205ENST00000465507 FAM117BQ6P1L5 589 aa6.19□□□□□ -1.42
XRN1-205ENST00000465507 GALNT12Q8IXK2 581 aa6.19□□□□□ -1.42
XRN1-205ENST00000465507 ASB16Q96NS5 453 aa6.19□□□□□ -1.42
XRN1-205ENST00000465507 MUC3BQ9H195 1237 aa6.19□□□□□ -1.42
XRN1-205ENST00000465507 NLRP2Q9NX02 1062 aa6.19□□□□□ -1.42
XRN1-205ENST00000465507 NFKBIEO00221 500 aa6.18□□□□□ -1.42
XRN1-205ENST00000465507 DDX3YO15523 660 aaKnown RBP6.18□□□□□ -1.42
XRN1-205ENST00000465507 TREHO43280 583 aa6.18□□□□□ -1.42
XRN1-205ENST00000465507 P4HBP07237 508 aaKnown RBP6.18□□□□□ -1.42
XRN1-205ENST00000465507 NLRP12P59046 1061 aa6.18□□□□□ -1.42
XRN1-205ENST00000465507 ATP2B2Q01814 1243 aa6.18□□□□□ -1.42
XRN1-205ENST00000465507 FOXD4L6Q3SYB3 417 aaPredicted RBP6.18□□□□□ -1.42
XRN1-205ENST00000465507 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.18□□□□□ -1.42
XRN1-205ENST00000465507 HGSNATQ68CP4 663 aa6.18□□□□□ -1.42
XRN1-205ENST00000465507 FOXD4L3Q6VB84 417 aaPredicted RBP6.18□□□□□ -1.42
XRN1-205ENST00000465507 FMR1NBQ8N0W7 255 aaPredicted RBP6.18□□□□□ -1.42
XRN1-205ENST00000465507 NXPE3Q969Y0 559 aa6.18□□□□□ -1.42
XRN1-205ENST00000465507 NACC1Q96RE7 527 aa6.18□□□□□ -1.42
XRN1-205ENST00000465507 DYRK3O43781 588 aa6.17□□□□□ -1.42
XRN1-205ENST00000465507 IGHA2P01877 340 aa6.17□□□□□ -1.42
XRN1-205ENST00000465507 GRIA4P48058 902 aa6.17□□□□□ -1.42
XRN1-205ENST00000465507 FCGRTP55899 365 aa6.17□□□□□ -1.42
XRN1-205ENST00000465507 TMCO4Q5TGY1 634 aa6.17□□□□□ -1.42
XRN1-205ENST00000465507 TMEM102Q8N9M5 508 aaPredicted RBP6.17□□□□□ -1.42
XRN1-205ENST00000465507 TTC9Q92623 222 aa6.17□□□□□ -1.42
XRN1-205ENST00000465507 DEAF1O75398 565 aaPredicted RBP6.16□□□□□ -1.42
XRN1-205ENST00000465507 ALX3O95076 343 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms