RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 COL9A1P20849 921 aa10.1□□□□□ -0.79
UBE4B-205ENST00000465408 FOXO4P98177 505 aa10.1□□□□□ -0.79
UBE4B-205ENST00000465408 RABL6Q3YEC7 729 aaPredicted RBP10.1□□□□□ -0.79
UBE4B-205ENST00000465408 RC3H1Q5TC82 1133 aaKnown RBP10.1□□□□□ -0.79
UBE4B-205ENST00000465408 LMBR1LQ6UX01 489 aa10.1□□□□□ -0.79
UBE4B-205ENST00000465408 CCDC8Q9H0W5 538 aaPredicted RBP10.1□□□□□ -0.79
UBE4B-205ENST00000465408 TLR7Q9NYK1 1049 aaKnown RBP10.1□□□□□ -0.79
UBE4B-205ENST00000465408 CHMP3Q9Y3E7 222 aa10.1□□□□□ -0.79
UBE4B-205ENST00000465408 COL15A1P39059 1388 aa10.1□□□□□ -0.79
UBE4B-205ENST00000465408 CARMIL3Q8ND23 1372 aa10.1□□□□□ -0.79
UBE4B-205ENST00000465408 LAMA3Q16787 3333 aa10.1□□□□□ -0.79
UBE4B-205ENST00000465408 TTC41PQ6P2S7 1318 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 REC8O95072 547 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 CELF2O95319 508 aaKnown RBP10.09□□□□□ -0.79
UBE4B-205ENST00000465408 CD2BP2O95400 341 aaKnown RBP10.09□□□□□ -0.79
UBE4B-205ENST00000465408 CYP19A1P11511 503 aaPredicted RBP10.09□□□□□ -0.79
UBE4B-205ENST00000465408 PTPN12Q05209 780 aaKnown RBP10.09□□□□□ -0.79
UBE4B-205ENST00000465408 PKN2Q16513 984 aaKnown RBP10.09□□□□□ -0.79
UBE4B-205ENST00000465408 CHRDL2Q6WN34 429 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 SYNE4Q8N205 404 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 SNX21Q969T3 373 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 EAF2Q96CJ1 260 aaPredicted RBP10.09□□□□□ -0.79
UBE4B-205ENST00000465408 GPATCH3Q96I76 525 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 ISCA1Q9BUE6 129 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 COPRSQ9NQ92 184 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 ECHDC1Q9NTX5 307 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 RAPGEFL1Q9UHV5 662 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 ZBTB1Q9Y2K1 713 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 COL5A3P25940 1745 aaPredicted RBP10.09□□□□□ -0.79
UBE4B-205ENST00000465408 TJP1Q07157 1748 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 NRXN2Q9P2S2 1712 aa10.09□□□□□ -0.79
UBE4B-205ENST00000465408 CNTNAP4Q9C0A0 1308 aa10.08□□□□□ -0.8
UBE4B-205ENST00000465408 MYH14Q7Z406 1995 aaKnown RBP10.08□□□□□ -0.8
UBE4B-205ENST00000465408 CENPFP49454 3210 aa10.08□□□□□ -0.8
UBE4B-205ENST00000465408 H0YIN7 160 aa10.08□□□□□ -0.8
UBE4B-205ENST00000465408 GLRX3O76003 335 aaKnown RBP10.08□□□□□ -0.8
UBE4B-205ENST00000465408 TFCP2Q12800 502 aa10.08□□□□□ -0.8
UBE4B-205ENST00000465408 TCIRG1Q13488 830 aa10.08□□□□□ -0.8
UBE4B-205ENST00000465408 BICDL1Q6ZP65 573 aa10.08□□□□□ -0.8
UBE4B-205ENST00000465408 CCDC191Q8NCU4 936 aa10.08□□□□□ -0.8
UBE4B-205ENST00000465408 RBM27Q9P2N5 1060 aaKnown RBP10.08□□□□□ -0.8
UBE4B-205ENST00000465408 MAP3K15Q6ZN16 1313 aa10.07□□□□□ -0.8
UBE4B-205ENST00000465408 H0YGN5 161 aa10.07□□□□□ -0.8
UBE4B-205ENST00000465408 GPTP24298 496 aa10.07□□□□□ -0.8
UBE4B-205ENST00000465408 RABEP1Q15276 862 aa10.07□□□□□ -0.8
UBE4B-205ENST00000465408 NFKBIBQ15653 356 aa10.07□□□□□ -0.8
UBE4B-205ENST00000465408 HLFQ16534 295 aa10.07□□□□□ -0.8
UBE4B-205ENST00000465408 IL25Q9H293 177 aa10.07□□□□□ -0.8
UBE4B-205ENST00000465408 ANTXR1Q9H6X2 564 aa10.07□□□□□ -0.8
UBE4B-205ENST00000465408 ANO2Q9NQ90 1003 aa10.07□□□□□ -0.8
UBE4B-205ENST00000465408 CACNA1AO00555 2505 aa10.06□□□□□ -0.8
UBE4B-205ENST00000465408 FAM155AB1AL88 458 aaPredicted RBP10.06□□□□□ -0.8
UBE4B-205ENST00000465408 PLA2G5P39877 138 aa10.06□□□□□ -0.8
UBE4B-205ENST00000465408 ZNF622Q969S3 477 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBE4B-205ENST00000465408 ZNF594Q96JF6 807 aaPredicted RBP10.06□□□□□ -0.8
UBE4B-205ENST00000465408 FOXD4L1Q9NU39 408 aa10.06□□□□□ -0.8
UBE4B-205ENST00000465408 PAPPA2Q9BXP8 1791 aa10.06□□□□□ -0.8
UBE4B-205ENST00000465408 K7ELQ4 463 aaPredicted RBP10.05□□□□□ -0.8
UBE4B-205ENST00000465408 KIF23Q02241 960 aaPredicted RBP10.05□□□□□ -0.8
UBE4B-205ENST00000465408 TNNI3KQ59H18 835 aa10.05□□□□□ -0.8
UBE4B-205ENST00000465408 FBXO46Q6PJ61 603 aaPredicted RBP10.05□□□□□ -0.8
UBE4B-205ENST00000465408 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
UBE4B-205ENST00000465408 FAM89AQ96GI7 184 aa10.05□□□□□ -0.8
UBE4B-205ENST00000465408 CCDC85AQ96PX6 553 aaPredicted RBP10.05□□□□□ -0.8
UBE4B-205ENST00000465408 BOLA2Q9H3K6 86 aa10.05□□□□□ -0.8
UBE4B-205ENST00000465408 PALD1Q9ULE6 856 aa10.05□□□□□ -0.8
UBE4B-205ENST00000465408 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
UBE4B-205ENST00000465408 FPGT-TNNI3KV9GXZ4 949 aa10.05□□□□□ -0.8
UBE4B-205ENST00000465408 COL11A2P13942 1736 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-205ENST00000465408 ZNF831Q5JPB2 1677 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 SGSM2O43147 1006 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 FRAT2O75474 233 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-205ENST00000465408 PCCAP05165 728 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-205ENST00000465408 MCCP23508 829 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
UBE4B-205ENST00000465408 EPS15P42566 896 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 TRIM28Q13263 835 aaKnown RBP10.04□□□□□ -0.8
UBE4B-205ENST00000465408 NFIXQ14938 502 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 LRRC24Q50LG9 513 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 INTS5Q6P9B9 1019 aaKnown RBP10.04□□□□□ -0.8
UBE4B-205ENST00000465408 ATG9AQ7Z3C6 839 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 NLRP10Q86W26 655 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
UBE4B-205ENST00000465408 DBNDD2Q9BQY9 259 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 ZNF408Q9H9D4 720 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 DIAPH3Q9NSV4 1193 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 DBNLQ9UJU6 430 aaKnown RBP10.04□□□□□ -0.8
UBE4B-205ENST00000465408 HDAC9Q9UKV0 1011 aa10.04□□□□□ -0.8
UBE4B-205ENST00000465408 SOX1O00570 391 aaPredicted RBP10.03□□□□□ -0.8
UBE4B-205ENST00000465408 SERPINB2P05120 415 aa10.03□□□□□ -0.8
UBE4B-205ENST00000465408 EN2P19622 333 aaPredicted RBP10.03□□□□□ -0.8
UBE4B-205ENST00000465408 CRKLP46109 303 aaKnown RBP10.03□□□□□ -0.8
UBE4B-205ENST00000465408 HSP90AB3PQ58FF7 597 aa10.03□□□□□ -0.8
UBE4B-205ENST00000465408 USPL1Q5W0Q7 1092 aa10.03□□□□□ -0.8
UBE4B-205ENST00000465408 CWC27Q6UX04 472 aaKnown RBP10.03□□□□□ -0.8
UBE4B-205ENST00000465408 GPC2Q8N158 579 aa10.03□□□□□ -0.8
UBE4B-205ENST00000465408 EVI5LQ96CN4 794 aa10.03□□□□□ -0.8
UBE4B-205ENST00000465408 EDC3Q96F86 508 aaKnown RBP10.03□□□□□ -0.8
UBE4B-205ENST00000465408 PUS3Q9BZE2 481 aaKnown RBP10.03□□□□□ -0.8
UBE4B-205ENST00000465408 CHMP5Q9NZZ3 219 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms