RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
XRN1-204ENST00000465074 TMEM88BA6NKF7 163 aa15.32■□□□□ 0.04
XRN1-204ENST00000465074 VIL1P09327 827 aaKnown RBP15.32■□□□□ 0.04
XRN1-204ENST00000465074 RPS12P25398 132 aaKnown RBP15.32■□□□□ 0.04
XRN1-204ENST00000465074 HIRAP54198 1017 aaPredicted RBP15.32■□□□□ 0.04
XRN1-204ENST00000465074 RSBN1LQ6PCB5 846 aaPredicted RBP15.32■□□□□ 0.04
XRN1-204ENST00000465074 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
XRN1-204ENST00000465074 PODNQ7Z5L7 613 aa15.32■□□□□ 0.04
XRN1-204ENST00000465074 DPF2Q92785 391 aa15.32■□□□□ 0.04
XRN1-204ENST00000465074 MXD3Q9BW11 206 aa15.32■□□□□ 0.04
XRN1-204ENST00000465074 CREBZFQ9NS37 354 aa15.32■□□□□ 0.04
XRN1-204ENST00000465074 PASKQ96RG2 1323 aa15.32■□□□□ 0.04
XRN1-204ENST00000465074 BCAR3O75815 825 aa15.31■□□□□ 0.04
XRN1-204ENST00000465074 GLIS2Q9BZE0 524 aaPredicted RBP15.31■□□□□ 0.04
XRN1-204ENST00000465074 PUS3Q9BZE2 481 aaKnown RBP15.31■□□□□ 0.04
XRN1-204ENST00000465074 ZNF408Q9H9D4 720 aa15.31■□□□□ 0.04
XRN1-204ENST00000465074 ABT1Q9ULW3 272 aaKnown RBP15.31■□□□□ 0.04
XRN1-204ENST00000465074 UTYO14607 1347 aa15.31■□□□□ 0.04
XRN1-204ENST00000465074 A0A1B0GUL6 1792 aa15.31■□□□□ 0.04
XRN1-204ENST00000465074 EGFRP00533 1210 aa15.3■□□□□ 0.04
XRN1-204ENST00000465074 UBTFL1P0CB47 393 aaPredicted RBP15.3■□□□□ 0.04
XRN1-204ENST00000465074 ANKRD44Q8N8A2 993 aa15.3■□□□□ 0.04
XRN1-204ENST00000465074 KLHDC4Q8TBB5 520 aa15.3■□□□□ 0.04
XRN1-204ENST00000465074 KIF16BQ96L93 1317 aa15.3■□□□□ 0.04
XRN1-204ENST00000465074 COA1Q9GZY4 146 aa15.3■□□□□ 0.04
XRN1-204ENST00000465074 PSME4Q14997 1843 aa15.29■□□□□ 0.04
XRN1-204ENST00000465074 GTF2IP78347 998 aa15.29■□□□□ 0.04
XRN1-204ENST00000465074 PAXIP1Q6ZW49 1069 aaPredicted RBP15.29■□□□□ 0.04
XRN1-204ENST00000465074 USP48Q86UV5 1035 aa15.29■□□□□ 0.04
XRN1-204ENST00000465074 CLUAP1Q96AJ1 413 aa15.29■□□□□ 0.04
XRN1-204ENST00000465074 POLR2AP24928 1970 aaKnown RBP15.29■□□□□ 0.04
XRN1-204ENST00000465074 IPO8O15397 1037 aaKnown RBP15.28■□□□□ 0.04
XRN1-204ENST00000465074 USP17L8P0C7I0 530 aa15.28■□□□□ 0.04
XRN1-204ENST00000465074 GRM1Q13255 1194 aa15.28■□□□□ 0.04
XRN1-204ENST00000465074 KIF4BQ2VIQ3 1234 aa15.28■□□□□ 0.04
XRN1-204ENST00000465074 LRRC24Q50LG9 513 aa15.28■□□□□ 0.04
XRN1-204ENST00000465074 TTLL5Q6EMB2 1281 aa15.28■□□□□ 0.04
XRN1-204ENST00000465074 ZNF804AQ7Z570 1209 aa15.28■□□□□ 0.04
XRN1-204ENST00000465074 AGBL3Q8NEM8 1001 aa15.28■□□□□ 0.04
XRN1-204ENST00000465074 DCPSQ96C86 337 aaKnown RBP15.28■□□□□ 0.04
XRN1-204ENST00000465074 JAG2Q9Y219 1238 aa15.28■□□□□ 0.04
XRN1-204ENST00000465074 TRPM7Q96QT4 1865 aa15.28■□□□□ 0.04
XRN1-204ENST00000465074 RABL6Q3YEC7 729 aaPredicted RBP15.27■□□□□ 0.04
XRN1-204ENST00000465074 METTL24Q5JXM2 366 aa15.27■□□□□ 0.04
XRN1-204ENST00000465074 DLK2Q6UY11 383 aa15.27■□□□□ 0.04
XRN1-204ENST00000465074 ZC3H15Q8WU90 426 aaKnown RBP15.27■□□□□ 0.04
XRN1-204ENST00000465074 CD209Q9NNX6 404 aa15.27■□□□□ 0.04
XRN1-204ENST00000465074 TNNQ9UQP3 1299 aa15.27■□□□□ 0.04
XRN1-204ENST00000465074 ASTN2O75129 1339 aaPredicted RBP15.26■□□□□ 0.03
XRN1-204ENST00000465074 CELF2O95319 508 aaKnown RBP15.26■□□□□ 0.03
XRN1-204ENST00000465074 BRPF1P55201 1214 aaPredicted RBP15.26■□□□□ 0.03
XRN1-204ENST00000465074 DACT2Q5SW24 774 aa15.26■□□□□ 0.03
XRN1-204ENST00000465074 STRIP1Q5VSL9 837 aa15.26■□□□□ 0.03
XRN1-204ENST00000465074 CDC37L1Q7L3B6 337 aa15.26■□□□□ 0.03
XRN1-204ENST00000465074 KRT26Q7Z3Y9 468 aa15.26■□□□□ 0.03
XRN1-204ENST00000465074 KIAA0825Q8IV33 1275 aa15.26■□□□□ 0.03
XRN1-204ENST00000465074 OGFOD1Q8N543 542 aa15.26■□□□□ 0.03
XRN1-204ENST00000465074 MYOZ2Q9NPC6 264 aa15.26■□□□□ 0.03
XRN1-204ENST00000465074 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
XRN1-204ENST00000465074 MROH5Q6ZUA9 1318 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 GYG1P46976 350 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 SCARF1Q14162 830 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 DEFB115Q30KQ5 88 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 CST9Q5W186 159 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 ARHGAP45Q92619 1136 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 GMLQ99445 158 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 MEIS3Q99687 375 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 SIL1Q9H173 461 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 GGA3Q9NZ52 723 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 PGAP2Q9UHJ9 254 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 RIPOR2Q9Y4F9 1068 aa15.25■□□□□ 0.03
XRN1-204ENST00000465074 ZBED9Q6R2W3 1325 aa15.24■□□□□ 0.03
XRN1-204ENST00000465074 ADM5C9JUS6 153 aa15.24■□□□□ 0.03
XRN1-204ENST00000465074 F8W031 263 aaPredicted RBP15.24■□□□□ 0.03
XRN1-204ENST00000465074 TRIM27P14373 513 aa15.24■□□□□ 0.03
XRN1-204ENST00000465074 VEGFBP49765 207 aa15.24■□□□□ 0.03
XRN1-204ENST00000465074 ZNF280AP59817 542 aaPredicted RBP15.24■□□□□ 0.03
XRN1-204ENST00000465074 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
XRN1-204ENST00000465074 VPS37DQ86XT2 251 aa15.24■□□□□ 0.03
XRN1-204ENST00000465074 SCAF8Q9UPN6 1271 aaKnown RBP15.24■□□□□ 0.03
XRN1-204ENST00000465074 HDAC5Q9UQL6 1122 aa15.24■□□□□ 0.03
XRN1-204ENST00000465074 CNTNAP1P78357 1384 aa15.24■□□□□ 0.03
XRN1-204ENST00000465074 MYO3BQ8WXR4 1341 aa15.23■□□□□ 0.03
XRN1-204ENST00000465074 FRAT2O75474 233 aaPredicted RBP15.23■□□□□ 0.03
XRN1-204ENST00000465074 HIBADHP31937 336 aaKnown RBP15.23■□□□□ 0.03
XRN1-204ENST00000465074 UBE4AQ14139 1066 aa15.23■□□□□ 0.03
XRN1-204ENST00000465074 ANGEL2Q5VTE6 544 aaKnown RBP15.23■□□□□ 0.03
XRN1-204ENST00000465074 ZKSCAN2Q63HK3 967 aa15.23■□□□□ 0.03
XRN1-204ENST00000465074 INTS3Q68E01 1043 aaKnown RBP15.23■□□□□ 0.03
XRN1-204ENST00000465074 SULF1Q8IWU6 871 aa15.23■□□□□ 0.03
XRN1-204ENST00000465074 JMYQ8N9B5 988 aa15.23■□□□□ 0.03
XRN1-204ENST00000465074 IQSEC3Q9UPP2 1182 aaPredicted RBP15.23■□□□□ 0.03
XRN1-204ENST00000465074 ZNF646O15015 1829 aaPredicted RBP15.22■□□□□ 0.03
XRN1-204ENST00000465074 SASH1O94885 1247 aa15.22■□□□□ 0.03
XRN1-204ENST00000465074 NBPF9Q3BBW0 867 aa15.22■□□□□ 0.03
XRN1-204ENST00000465074 C15orf52Q6ZUT6 534 aaKnown RBP15.22■□□□□ 0.03
XRN1-204ENST00000465074 HDAC9Q9UKV0 1011 aa15.22■□□□□ 0.03
XRN1-204ENST00000465074 IRS2Q9Y4H2 1338 aa15.21■□□□□ 0.03
XRN1-204ENST00000465074 EYA2O00167 538 aa15.21■□□□□ 0.03
XRN1-204ENST00000465074 PDE8BO95263 885 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms