RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 MYH16Q9H6N6 1097 aa29.11■■■□□ 2.25
USP42-205ENST00000465073 FKBP5Q13451 457 aaPredicted RBP29.1■■■□□ 2.25
USP42-205ENST00000465073 LEMD3Q9Y2U8 911 aa29.1■■■□□ 2.25
USP42-205ENST00000465073 FANCIQ9NVI1 1328 aa29.1■■■□□ 2.25
USP42-205ENST00000465073 WDR63Q8IWG1 891 aa29.1■■■□□ 2.25
USP42-205ENST00000465073 DNAAF4Q8WXU2 420 aa29.1■■■□□ 2.25
USP42-205ENST00000465073 PITPNM2Q9BZ72 1349 aa29.09■■■□□ 2.25
USP42-205ENST00000465073 LINS1Q8NG48 757 aa29.09■■■□□ 2.25
USP42-205ENST00000465073 COA1Q9GZY4 146 aa29.09■■■□□ 2.25
USP42-205ENST00000465073 MYH3P11055 1940 aa29.08■■■□□ 2.25
USP42-205ENST00000465073 ITGA6P23229 1130 aa29.08■■■□□ 2.25
USP42-205ENST00000465073 CASP7P55210 303 aa29.08■■■□□ 2.25
USP42-205ENST00000465073 ANKRD2Q9GZV1 360 aa29.08■■■□□ 2.25
USP42-205ENST00000465073 PSME4Q14997 1843 aa29.08■■■□□ 2.25
USP42-205ENST00000465073 VAMP4O75379 141 aa29.07■■■□□ 2.24
USP42-205ENST00000465073 CSF1RP07333 972 aa29.07■■■□□ 2.24
USP42-205ENST00000465073 KIF23Q02241 960 aaPredicted RBP29.07■■■□□ 2.24
USP42-205ENST00000465073 DACT2Q5SW24 774 aa29.07■■■□□ 2.24
USP42-205ENST00000465073 MPHOSPH8Q99549 860 aa29.07■■■□□ 2.24
USP42-205ENST00000465073 FKBP1BP68106 108 aa29.06■■■□□ 2.24
USP42-205ENST00000465073 STRIP1Q5VSL9 837 aa29.06■■■□□ 2.24
USP42-205ENST00000465073 OGFOD1Q8N543 542 aa29.06■■■□□ 2.24
USP42-205ENST00000465073 MYO3BQ8WXR4 1341 aa29.05■■■□□ 2.24
USP42-205ENST00000465073 ANP32CO43423 234 aa29.05■■■□□ 2.24
USP42-205ENST00000465073 FAM161AQ3B820 660 aa29.05■■■□□ 2.24
USP42-205ENST00000465073 SAGE1Q9NXZ1 904 aa29.05■■■□□ 2.24
USP42-205ENST00000465073 ZNF804BA4D1E1 1349 aa29.05■■■□□ 2.24
USP42-205ENST00000465073 CCDC85CA6NKD9 419 aa29.04■■■□□ 2.24
USP42-205ENST00000465073 SLC10A3P09131 477 aa29.04■■■□□ 2.24
USP42-205ENST00000465073 MMP14P50281 582 aa29.04■■■□□ 2.24
USP42-205ENST00000465073 TXNRD3Q86VQ6 643 aa29.04■■■□□ 2.24
USP42-205ENST00000465073 SALL2Q9Y467 1007 aaPredicted RBP29.04■■■□□ 2.24
USP42-205ENST00000465073 EXOSC9Q06265 439 aaKnown RBP29.03■■■□□ 2.24
USP42-205ENST00000465073 FBXW7Q969H0 707 aa29.03■■■□□ 2.24
USP42-205ENST00000465073 MXD3Q9BW11 206 aa29.03■■■□□ 2.24
USP42-205ENST00000465073 MCOLN1Q9GZU1 580 aa29.03■■■□□ 2.24
USP42-205ENST00000465073 NBPF9Q3BBW0 867 aa29.02■■■□□ 2.24
USP42-205ENST00000465073 TTLL5Q6EMB2 1281 aa29.01■■■□□ 2.23
USP42-205ENST00000465073 REM2Q8IYK8 340 aaPredicted RBP29.01■■■□□ 2.23
USP42-205ENST00000465073 SPEF2Q9C093 1822 aa29.01■■■□□ 2.23
USP42-205ENST00000465073 ANKRD18BA2A2Z9 1011 aa29■■■□□ 2.23
USP42-205ENST00000465073 ZEB1P37275 1124 aaPredicted RBP29■■■□□ 2.23
USP42-205ENST00000465073 KCNJ4P48050 445 aa29■■■□□ 2.23
USP42-205ENST00000465073 CASP8AP2Q9UKL3 1982 aa29■■■□□ 2.23
USP42-205ENST00000465073 CHRNDQ07001 517 aa28.99■■■□□ 2.23
USP42-205ENST00000465073 CSRNP1Q96S65 589 aa28.99■■■□□ 2.23
USP42-205ENST00000465073 RNF186Q9NXI6 227 aa28.99■■■□□ 2.23
USP42-205ENST00000465073 CACNA1FO60840 1977 aa28.99■■■□□ 2.23
USP42-205ENST00000465073 WNT10BO00744 389 aa28.98■■■□□ 2.23
USP42-205ENST00000465073 DGKZQ13574 1117 aa28.98■■■□□ 2.23
USP42-205ENST00000465073 TRPA1O75762 1119 aa28.97■■■□□ 2.23
USP42-205ENST00000465073 KLRK1P26718 216 aa28.97■■■□□ 2.23
USP42-205ENST00000465073 RASAL3Q86YV0 1011 aa28.97■■■□□ 2.23
USP42-205ENST00000465073 IFIT5Q13325 482 aaKnown RBP28.97■■■□□ 2.23
USP42-205ENST00000465073 BEND3Q5T5X7 828 aa28.97■■■□□ 2.23
USP42-205ENST00000465073 HDAC9Q9UKV0 1011 aa28.97■■■□□ 2.23
USP42-205ENST00000465073 SCAF8Q9UPN6 1271 aaKnown RBP28.97■■■□□ 2.23
USP42-205ENST00000465073 PAPPA2Q9BXP8 1791 aa28.96■■■□□ 2.23
USP42-205ENST00000465073 F6X3S4 739 aa28.96■■■□□ 2.23
USP42-205ENST00000465073 FOXO4P98177 505 aa28.96■■■□□ 2.23
USP42-205ENST00000465073 GTF2IP78347 998 aa28.95■■■□□ 2.22
USP42-205ENST00000465073 ZNF316A6NFI3 1004 aaPredicted RBP28.94■■■□□ 2.22
USP42-205ENST00000465073 RGS19P49795 217 aa28.94■■■□□ 2.22
USP42-205ENST00000465073 PRAMEF18Q5VWM3 479 aa28.94■■■□□ 2.22
USP42-205ENST00000465073 C15orf52Q6ZUT6 534 aaKnown RBP28.94■■■□□ 2.22
USP42-205ENST00000465073 CD209Q9NNX6 404 aa28.94■■■□□ 2.22
USP42-205ENST00000465073 UBE2Q2LH0YL09 131 aa28.93■■■□□ 2.22
USP42-205ENST00000465073 NF2P35240 595 aa28.93■■■□□ 2.22
USP42-205ENST00000465073 MOB2Q70IA6 237 aa28.93■■■□□ 2.22
USP42-205ENST00000465073 KIAA0825Q8IV33 1275 aa28.93■■■□□ 2.22
USP42-205ENST00000465073 SPINK5Q9NQ38 1064 aaPredicted RBP28.93■■■□□ 2.22
USP42-205ENST00000465073 SASH1O94885 1247 aa28.92■■■□□ 2.22
USP42-205ENST00000465073 CHMP3Q9Y3E7 222 aa28.92■■■□□ 2.22
USP42-205ENST00000465073 ZNF646O15015 1829 aaPredicted RBP28.91■■■□□ 2.22
USP42-205ENST00000465073 TTLL12Q14166 644 aaPredicted RBP28.91■■■□□ 2.22
USP42-205ENST00000465073 APOBEC3FQ8IUX4 373 aaKnown RBP28.91■■■□□ 2.22
USP42-205ENST00000465073 TAF5LO75529 589 aa28.91■■■□□ 2.22
USP42-205ENST00000465073 LMBR1LQ6UX01 489 aa28.91■■■□□ 2.22
USP42-205ENST00000465073 HELBQ8NG08 1087 aaPredicted RBP28.91■■■□□ 2.22
USP42-205ENST00000465073 ZBED3Q96IU2 234 aaPredicted RBP28.91■■■□□ 2.22
USP42-205ENST00000465073 IRS2Q9Y4H2 1338 aa28.9■■■□□ 2.22
USP42-205ENST00000465073 GRM8O00222 908 aa28.9■■■□□ 2.22
USP42-205ENST00000465073 SNAP23O00161 211 aa28.89■■■□□ 2.22
USP42-205ENST00000465073 MLLT1Q03111 559 aaPredicted RBP28.89■■■□□ 2.22
USP42-205ENST00000465073 CCDC57Q2TAC2 916 aa28.89■■■□□ 2.22
USP42-205ENST00000465073 ZNF804AQ7Z570 1209 aa28.88■■■□□ 2.21
USP42-205ENST00000465073 AKAP11Q9UKA4 1901 aa28.87■■■□□ 2.21
USP42-205ENST00000465073 ALDH1L1O75891 902 aa28.87■■■□□ 2.21
USP42-205ENST00000465073 EPHA10Q5JZY3 1008 aa28.87■■■□□ 2.21
USP42-205ENST00000465073 C9orf78Q9NZ63 289 aaPredicted RBP28.87■■■□□ 2.21
USP42-205ENST00000465073 IL1R1P14778 569 aa28.86■■■□□ 2.21
USP42-205ENST00000465073 DLGAP5Q15398 846 aa28.86■■■□□ 2.21
USP42-205ENST00000465073 TAF7LQ5H9L4 462 aa28.86■■■□□ 2.21
USP42-205ENST00000465073 LDHAL6AQ6ZMR3 332 aa28.86■■■□□ 2.21
USP42-205ENST00000465073 FAM9BQ8IZU0 186 aa28.86■■■□□ 2.21
USP42-205ENST00000465073 ARMC9Q7Z3E5 817 aa28.85■■■□□ 2.21
USP42-205ENST00000465073 CERS5Q8N5B7 392 aa28.85■■■□□ 2.21
USP42-205ENST00000465073 MTMR14Q8NCE2 650 aa28.85■■■□□ 2.21
USP42-205ENST00000465073 FKBP1AP62942 108 aaKnown RBP28.85■■■□□ 2.21
USP42-205ENST00000465073 ZNF594Q96JF6 807 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms