RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
APP-213ENST00000464867 KIAA0100Q14667 2235 aaKnown RBP12.67□□□□□ -0.38
APP-213ENST00000464867 MKI67P46013 3256 aaKnown RBP12.66□□□□□ -0.38
APP-213ENST00000464867 ADM5C9JUS6 153 aa12.66□□□□□ -0.38
APP-213ENST00000464867 FKTNO75072 461 aa12.66□□□□□ -0.38
APP-213ENST00000464867 DPP8Q6V1X1 898 aaPredicted RBP12.66□□□□□ -0.38
APP-213ENST00000464867 SAMD7Q7Z3H4 446 aa12.66□□□□□ -0.38
APP-213ENST00000464867 RASAL3Q86YV0 1011 aa12.66□□□□□ -0.38
APP-213ENST00000464867 DPF2Q92785 391 aa12.66□□□□□ -0.38
APP-213ENST00000464867 RABGEF1Q9UJ41 708 aa12.66□□□□□ -0.38
APP-213ENST00000464867 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
APP-213ENST00000464867 USP16Q9Y5T5 823 aa12.66□□□□□ -0.38
APP-213ENST00000464867 A0A0C4DFX4 3053 aa12.65□□□□□ -0.38
APP-213ENST00000464867 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
APP-213ENST00000464867 GNAT3A8MTJ3 354 aa12.65□□□□□ -0.38
APP-213ENST00000464867 TSR1Q2NL82 804 aaKnown RBP12.65□□□□□ -0.38
APP-213ENST00000464867 TBC1D10BQ4KMP7 808 aaPredicted RBP12.65□□□□□ -0.38
APP-213ENST00000464867 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
APP-213ENST00000464867 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
APP-213ENST00000464867 PRAMEF22A3QJZ6 481 aa12.64□□□□□ -0.39
APP-213ENST00000464867 PTPN5P54829 565 aa12.64□□□□□ -0.39
APP-213ENST00000464867 FKBP1BP68106 108 aa12.64□□□□□ -0.39
APP-213ENST00000464867 KIAA2012Q0VF49 1180 aa12.64□□□□□ -0.39
APP-213ENST00000464867 THSD4Q6ZMP0 1018 aa12.64□□□□□ -0.39
APP-213ENST00000464867 MPNDQ8N594 471 aa12.64□□□□□ -0.39
APP-213ENST00000464867 RTFDC1Q9BY42 306 aaPredicted RBP12.64□□□□□ -0.39
APP-213ENST00000464867 PLA2G2EQ9NZK7 142 aa12.64□□□□□ -0.39
APP-213ENST00000464867 SZT2Q5T011 3432 aa12.64□□□□□ -0.39
APP-213ENST00000464867 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
APP-213ENST00000464867 SNRPA1P09661 255 aaKnown RBP12.63□□□□□ -0.39
APP-213ENST00000464867 HLFQ16534 295 aa12.63□□□□□ -0.39
APP-213ENST00000464867 WNT2BQ93097 391 aa12.63□□□□□ -0.39
APP-213ENST00000464867 NLRP3Q96P20 1036 aa12.63□□□□□ -0.39
APP-213ENST00000464867 ABCC12Q96J65 1359 aa12.63□□□□□ -0.39
APP-213ENST00000464867 RBBP6Q7Z6E9 1792 aaKnown RBP12.63□□□□□ -0.39
APP-213ENST00000464867 PAPPA2Q9BXP8 1791 aa12.63□□□□□ -0.39
APP-213ENST00000464867 RIC1Q4ADV7 1423 aa12.62□□□□□ -0.39
APP-213ENST00000464867 SIPA1L3O60292 1781 aaPredicted RBP12.62□□□□□ -0.39
APP-213ENST00000464867 SREBF2Q12772 1141 aa12.62□□□□□ -0.39
APP-213ENST00000464867 IL17REQ8NFR9 667 aa12.62□□□□□ -0.39
APP-213ENST00000464867 GAS2L2Q8NHY3 880 aa12.62□□□□□ -0.39
APP-213ENST00000464867 CDCA5Q96FF9 252 aa12.62□□□□□ -0.39
APP-213ENST00000464867 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
APP-213ENST00000464867 TRIM17Q9Y577 477 aa12.62□□□□□ -0.39
APP-213ENST00000464867 GOLGA8CPA6NN73 597 aa12.61□□□□□ -0.39
APP-213ENST00000464867 MAP3K7O43318 606 aa12.61□□□□□ -0.39
APP-213ENST00000464867 BBOX1O75936 387 aa12.61□□□□□ -0.39
APP-213ENST00000464867 RPS12P25398 132 aaKnown RBP12.61□□□□□ -0.39
APP-213ENST00000464867 TM4SF4P48230 202 aa12.61□□□□□ -0.39
APP-213ENST00000464867 EN2P19622 333 aaPredicted RBP12.6□□□□□ -0.39
APP-213ENST00000464867 SP8Q8IXZ3 490 aa12.6□□□□□ -0.39
APP-213ENST00000464867 GGA3Q9NZ52 723 aa12.6□□□□□ -0.39
APP-213ENST00000464867 NUP98P52948 1817 aa12.6□□□□□ -0.39
APP-213ENST00000464867 GRXCR2A6NFK2 248 aa12.59□□□□□ -0.39
APP-213ENST00000464867 ERVV-1B6SEH8 477 aa12.59□□□□□ -0.39
APP-213ENST00000464867 PSMD14O00487 310 aa12.59□□□□□ -0.39
APP-213ENST00000464867 KCNQ3O43525 872 aa12.59□□□□□ -0.39
APP-213ENST00000464867 ALDH1A1P00352 501 aa12.59□□□□□ -0.39
APP-213ENST00000464867 KIF4BQ2VIQ3 1234 aa12.59□□□□□ -0.39
APP-213ENST00000464867 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
APP-213ENST00000464867 PPP1R42Q7Z4L9 355 aa12.59□□□□□ -0.39
APP-213ENST00000464867 SLC51AQ86UW1 340 aa12.59□□□□□ -0.39
APP-213ENST00000464867 PANK3Q9H999 370 aa12.59□□□□□ -0.39
APP-213ENST00000464867 IBTKQ9P2D0 1353 aaPredicted RBP12.58□□□□□ -0.4
APP-213ENST00000464867 YDJCA8MPS7 323 aa12.58□□□□□ -0.4
APP-213ENST00000464867 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
APP-213ENST00000464867 NBPF26B4DH59 902 aa12.58□□□□□ -0.4
APP-213ENST00000464867 H0YGN5 161 aa12.58□□□□□ -0.4
APP-213ENST00000464867 EGFRP00533 1210 aa12.58□□□□□ -0.4
APP-213ENST00000464867 GPTP24298 496 aa12.58□□□□□ -0.4
APP-213ENST00000464867 TTLL12Q14166 644 aaPredicted RBP12.58□□□□□ -0.4
APP-213ENST00000464867 NBPF10Q6P3W6 841 aaKnown RBP12.58□□□□□ -0.4
APP-213ENST00000464867 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
APP-213ENST00000464867 CFHR5Q9BXR6 569 aa12.58□□□□□ -0.4
APP-213ENST00000464867 DIAPH1O60610 1272 aaKnown RBP12.57□□□□□ -0.4
APP-213ENST00000464867 TCIRG1Q13488 830 aa12.57□□□□□ -0.4
APP-213ENST00000464867 WASHC4Q2M389 1173 aa12.57□□□□□ -0.4
APP-213ENST00000464867 SUSD4Q5VX71 490 aa12.57□□□□□ -0.4
APP-213ENST00000464867 ABCC4O15439 1325 aa12.57□□□□□ -0.4
APP-213ENST00000464867 CENPFP49454 3210 aa12.56□□□□□ -0.4
APP-213ENST00000464867 UBE2Q2LH0YL09 131 aa12.56□□□□□ -0.4
APP-213ENST00000464867 OTOP1Q7RTM1 612 aa12.56□□□□□ -0.4
APP-213ENST00000464867 ERO1AQ96HE7 468 aa12.56□□□□□ -0.4
APP-213ENST00000464867 SEPT9Q9UHD8 586 aaPredicted RBP12.56□□□□□ -0.4
APP-213ENST00000464867 MAP3K15Q6ZN16 1313 aa12.56□□□□□ -0.4
APP-213ENST00000464867 OSBPP22059 807 aa12.55□□□□□ -0.4
APP-213ENST00000464867 NF2P35240 595 aa12.55□□□□□ -0.4
APP-213ENST00000464867 ANGEL2Q5VTE6 544 aaKnown RBP12.55□□□□□ -0.4
APP-213ENST00000464867 DDX46Q7L014 1031 aaKnown RBP12.55□□□□□ -0.4
APP-213ENST00000464867 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
APP-213ENST00000464867 ARMC5Q96C12 935 aa12.55□□□□□ -0.4
APP-213ENST00000464867 DBNDD1Q9H9R9 158 aa12.55□□□□□ -0.4
APP-213ENST00000464867 PTPN22Q9Y2R2 807 aa12.55□□□□□ -0.4
APP-213ENST00000464867 KNSTRNQ9Y448 316 aa12.55□□□□□ -0.4
APP-213ENST00000464867 SCARF1Q14162 830 aa12.54□□□□□ -0.4
APP-213ENST00000464867 SLC4A8Q2Y0W8 1093 aa12.54□□□□□ -0.4
APP-213ENST00000464867 PARP10Q53GL7 1025 aa12.54□□□□□ -0.4
APP-213ENST00000464867 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
APP-213ENST00000464867 LAPTM4BQ86VI4 370 aa12.54□□□□□ -0.4
APP-213ENST00000464867 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms