RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 JCADQ9P266 1359 aa14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 ATP5JP18859 108 aa14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 NAA16Q6N069 864 aaPredicted RBP14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 FHOD1Q9Y613 1164 aa14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 DIP2BQ9P265 1576 aa14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 ATP1A3P13637 1013 aa14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 LMOD1P29536 600 aaPredicted RBP14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 ARHGAP29Q52LW3 1261 aa14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 DHX32Q7L7V1 743 aaKnown RBP14.68□□□□□ -0.06
CLCNKA-204ENST00000464764 NEURL1BA8MQ27 555 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 FDPSP14324 419 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 TTLL5Q6EMB2 1281 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 HOMER1Q86YM7 354 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 OSBPL5Q9H0X9 879 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 FANCGO15287 622 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 H2AFXP16104 143 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 PTPN12Q05209 780 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 GCKRQ14397 625 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 PLEKHO1Q53GL0 409 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 C1orf141Q5JVX7 400 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 COPS6Q7L5N1 327 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 XAGE3Q8WTP9 111 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 MRPS27Q92552 414 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 DNAI1Q9UI46 699 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 PLEKHG1Q9ULL1 1385 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 UTYO14607 1347 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 FAM177A1Q8N128 213 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 ZNF396Q96N95 335 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 TMX1Q9H3N1 280 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 L2HGDHQ9H9P8 463 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 KIAA1468Q9P260 1216 aa14.67□□□□□ -0.06
CLCNKA-204ENST00000464764 ATP5J2-PTCD1G3V325 749 aa14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 GOLIM4O00461 696 aa14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 PTCD1O75127 700 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 KCNA6P17658 529 aa14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 SFPQP23246 707 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 PDIA3P30101 505 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 IRX5P78411 483 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 SF3A1Q15459 793 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 CCDC93Q567U6 631 aa14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 NOL10Q9BSC4 688 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 EID1Q9Y6B2 187 aa14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 CHD2O14647 1828 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 POLR3GO15318 223 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 SEC31AO94979 1220 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 PLA2G4AP47712 749 aa14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 GSDMDP57764 484 aa14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 NAT10Q9H0A0 1025 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 HDAC5Q9UQL6 1122 aa14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLCNKA-204ENST00000464764 DDX58O95786 925 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-204ENST00000464764 TAF3Q5VWG9 929 aa14.65□□□□□ -0.06
CLCNKA-204ENST00000464764 UBE3BQ7Z3V4 1068 aa14.65□□□□□ -0.06
CLCNKA-204ENST00000464764 NEUROD6Q96NK8 337 aa14.65□□□□□ -0.06
CLCNKA-204ENST00000464764 LLPHQ9BRT6 129 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-204ENST00000464764 PXDNQ92626 1479 aa14.65□□□□□ -0.06
CLCNKA-204ENST00000464764 NEDD4P46934 1319 aa14.65□□□□□ -0.06
CLCNKA-204ENST00000464764 EXOSC10Q01780 885 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-204ENST00000464764 DPF2Q92785 391 aa14.65□□□□□ -0.06
CLCNKA-204ENST00000464764 E7EWF7 191 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 PNMA6AP0CW24 399 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 RFX5P48382 616 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 TIMM10P62072 90 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 NCAPHQ15003 741 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 STK38Q15208 465 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 ZRSR1Q15695 479 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 CHMP4AQ9BY43 222 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 ZCCHC17Q9NP64 241 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 BMS1Q14692 1282 aaKnown RBP14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 HSP90AA4PQ58FG1 418 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 ADALQ6DHV7 355 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 LINC00301Q8NCQ3 95 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 HAND2P61296 217 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 HAUS7Q99871 368 aa14.64□□□□□ -0.07
CLCNKA-204ENST00000464764 MARCKSP29966 332 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-204ENST00000464764 NEXNQ0ZGT2 675 aa14.63□□□□□ -0.07
CLCNKA-204ENST00000464764 DIP2AQ14689 1571 aa14.63□□□□□ -0.07
CLCNKA-204ENST00000464764 SALL1Q9NSC2 1324 aa14.63□□□□□ -0.07
CLCNKA-204ENST00000464764 CARMIL3Q8ND23 1372 aa14.63□□□□□ -0.07
CLCNKA-204ENST00000464764 ZNF202O95125 648 aa14.63□□□□□ -0.07
CLCNKA-204ENST00000464764 SLC3A2P08195 630 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-204ENST00000464764 COPRSQ9NQ92 184 aa14.63□□□□□ -0.07
CLCNKA-204ENST00000464764 KCND1Q9NSA2 647 aa14.63□□□□□ -0.07
CLCNKA-204ENST00000464764 CCDC66A2RUB6 948 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 URI1O94763 535 aaPredicted RBP14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 LMOD2Q6P5Q4 547 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 TIGD1Q96MW7 591 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 UTP14AQ9BVJ6 771 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 RTEL1Q9NZ71 1219 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 IMPACTQ9P2X3 320 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 HSPD1P10809 573 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 CDK11BP21127 795 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 HNRNPH2P55795 449 aaKnown RBP14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 FANCCQ00597 558 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 KBTBD3Q8NAB2 608 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 CARD6Q9BX69 1037 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 HSD3B7Q9H2F3 369 aa14.62□□□□□ -0.07
CLCNKA-204ENST00000464764 KIF28PB7ZC32 967 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms