RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 WFDC8Q8IUA0 241 aa10.58□□□□□ -0.72
PTCD3-205ENST00000464541 ZKSCAN3Q9BRR0 538 aa10.58□□□□□ -0.72
PTCD3-205ENST00000464541 PNMA6FA0A0J9YX94 578 aa10.57□□□□□ -0.72
PTCD3-205ENST00000464541 PDE2AO00408 941 aaPredicted RBP10.57□□□□□ -0.72
PTCD3-205ENST00000464541 POLR3DP05423 398 aaPredicted RBP10.57□□□□□ -0.72
PTCD3-205ENST00000464541 PTPRAP18433 802 aa10.57□□□□□ -0.72
PTCD3-205ENST00000464541 ATP2B2Q01814 1243 aa10.57□□□□□ -0.72
PTCD3-205ENST00000464541 DTWD1Q8N5C7 304 aa10.57□□□□□ -0.72
PTCD3-205ENST00000464541 PLVAPQ9BX97 442 aa10.57□□□□□ -0.72
PTCD3-205ENST00000464541 BHLHE41Q9C0J9 482 aaPredicted RBP10.57□□□□□ -0.72
PTCD3-205ENST00000464541 FAM177BA6PVY3 158 aa10.56□□□□□ -0.72
PTCD3-205ENST00000464541 MAPK8P45983 427 aa10.56□□□□□ -0.72
PTCD3-205ENST00000464541 KCNMA1Q12791 1236 aa10.56□□□□□ -0.72
PTCD3-205ENST00000464541 ALG1LQ6GMV1 187 aa10.56□□□□□ -0.72
PTCD3-205ENST00000464541 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
PTCD3-205ENST00000464541 ADAM19Q9H013 955 aa10.56□□□□□ -0.72
PTCD3-205ENST00000464541 SRA1Q9HD15 236 aaKnown RBP10.56□□□□□ -0.72
PTCD3-205ENST00000464541 TRIM33Q9UPN9 1127 aa10.56□□□□□ -0.72
PTCD3-205ENST00000464541 A0A1W2PP55 124 aa10.55□□□□□ -0.72
PTCD3-205ENST00000464541 GDF6Q6KF10 455 aaPredicted RBP10.55□□□□□ -0.72
PTCD3-205ENST00000464541 NPAS4Q8IUM7 802 aa10.55□□□□□ -0.72
PTCD3-205ENST00000464541 NXPE3Q969Y0 559 aa10.55□□□□□ -0.72
PTCD3-205ENST00000464541 NPHS2Q9NP85 383 aa10.55□□□□□ -0.72
PTCD3-205ENST00000464541 LATS2Q9NRM7 1088 aa10.55□□□□□ -0.72
PTCD3-205ENST00000464541 P4HBP07237 508 aaKnown RBP10.54□□□□□ -0.72
PTCD3-205ENST00000464541 ACPPP15309 386 aa10.54□□□□□ -0.72
PTCD3-205ENST00000464541 CDC27P30260 824 aa10.54□□□□□ -0.72
PTCD3-205ENST00000464541 PRRT3Q5FWE3 981 aa10.54□□□□□ -0.72
PTCD3-205ENST00000464541 TRAPPC3LQ5T215 181 aa10.54□□□□□ -0.72
PTCD3-205ENST00000464541 MAP4K3Q8IVH8 894 aa10.54□□□□□ -0.72
PTCD3-205ENST00000464541 IL22RA1Q8N6P7 574 aa10.54□□□□□ -0.72
PTCD3-205ENST00000464541 DCAF11Q8TEB1 546 aa10.54□□□□□ -0.72
PTCD3-205ENST00000464541 NLRP2Q9NX02 1062 aa10.54□□□□□ -0.72
PTCD3-205ENST00000464541 IRS1P35568 1242 aa10.53□□□□□ -0.72
PTCD3-205ENST00000464541 BAG6P46379 1132 aa10.53□□□□□ -0.72
PTCD3-205ENST00000464541 RAC1P63000 192 aa10.53□□□□□ -0.72
PTCD3-205ENST00000464541 EAPPQ56P03 285 aaPredicted RBP10.53□□□□□ -0.72
PTCD3-205ENST00000464541 CCNJLQ8IV13 435 aa10.53□□□□□ -0.72
PTCD3-205ENST00000464541 SUV39H2Q9H5I1 410 aa10.53□□□□□ -0.72
PTCD3-205ENST00000464541 TRAK1Q9UPV9 953 aa10.53□□□□□ -0.72
PTCD3-205ENST00000464541 BSNDQ8WZ55 320 aa10.52□□□□□ -0.73
PTCD3-205ENST00000464541 EHD4Q9H223 541 aa10.52□□□□□ -0.73
PTCD3-205ENST00000464541 LIN7BQ9HAP6 207 aa10.52□□□□□ -0.73
PTCD3-205ENST00000464541 PPME1Q9Y570 386 aa10.52□□□□□ -0.73
PTCD3-205ENST00000464541 LDHBP07195 334 aaKnown RBP10.51□□□□□ -0.73
PTCD3-205ENST00000464541 SPATA31C1P0DKV0 1188 aa10.51□□□□□ -0.73
PTCD3-205ENST00000464541 TRIM28Q13263 835 aaKnown RBP10.51□□□□□ -0.73
PTCD3-205ENST00000464541 PRPF40BQ6NWY9 871 aaKnown RBP10.51□□□□□ -0.73
PTCD3-205ENST00000464541 DMRTC2Q8IXT2 367 aaPredicted RBP10.51□□□□□ -0.73
PTCD3-205ENST00000464541 FRMD6Q96NE9 622 aa10.51□□□□□ -0.73
PTCD3-205ENST00000464541 HHIPQ96QV1 700 aa10.51□□□□□ -0.73
PTCD3-205ENST00000464541 TCF12Q99081 682 aa10.51□□□□□ -0.73
PTCD3-205ENST00000464541 LACRTQ9GZZ8 138 aa10.51□□□□□ -0.73
PTCD3-205ENST00000464541 A0A0A0MRY4 1105 aa10.5□□□□□ -0.73
PTCD3-205ENST00000464541 GIPC1O14908 333 aa10.5□□□□□ -0.73
PTCD3-205ENST00000464541 GADD45BO75293 160 aaPredicted RBP10.5□□□□□ -0.73
PTCD3-205ENST00000464541 PRPF40AO75400 957 aaKnown RBP10.5□□□□□ -0.73
PTCD3-205ENST00000464541 MFAP1P55081 439 aaKnown RBP10.5□□□□□ -0.73
PTCD3-205ENST00000464541 CABP4P57796 275 aa10.5□□□□□ -0.73
PTCD3-205ENST00000464541 EPS8L3Q8TE67 593 aaKnown RBP10.5□□□□□ -0.73
PTCD3-205ENST00000464541 WNT8BQ93098 351 aa10.5□□□□□ -0.73
PTCD3-205ENST00000464541 SOX13Q9UN79 622 aa10.5□□□□□ -0.73
PTCD3-205ENST00000464541 TRPA1O75762 1119 aa10.49□□□□□ -0.73
PTCD3-205ENST00000464541 COL8A1P27658 744 aa10.49□□□□□ -0.73
PTCD3-205ENST00000464541 PTPN12Q05209 780 aaKnown RBP10.49□□□□□ -0.73
PTCD3-205ENST00000464541 FAM117BQ6P1L5 589 aa10.49□□□□□ -0.73
PTCD3-205ENST00000464541 FMR1NBQ8N0W7 255 aaPredicted RBP10.49□□□□□ -0.73
PTCD3-205ENST00000464541 SRCIN1Q9C0H9 1055 aa10.49□□□□□ -0.73
PTCD3-205ENST00000464541 PPP4R2Q9NY27 417 aa10.49□□□□□ -0.73
PTCD3-205ENST00000464541 H3BRJ5 948 aa10.48□□□□□ -0.73
PTCD3-205ENST00000464541 ELNP15502 786 aa10.48□□□□□ -0.73
PTCD3-205ENST00000464541 RASSF7Q02833 373 aa10.48□□□□□ -0.73
PTCD3-205ENST00000464541 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.48□□□□□ -0.73
PTCD3-205ENST00000464541 FBXO11Q86XK2 927 aa10.48□□□□□ -0.73
PTCD3-205ENST00000464541 ZFYVE1Q9HBF4 777 aa10.48□□□□□ -0.73
PTCD3-205ENST00000464541 EIF4EBP3O60516 100 aaPredicted RBP10.47□□□□□ -0.73
PTCD3-205ENST00000464541 GRM2Q14416 872 aa10.47□□□□□ -0.73
PTCD3-205ENST00000464541 FBXO33Q7Z6M2 555 aa10.47□□□□□ -0.73
PTCD3-205ENST00000464541 SPG7Q9UQ90 795 aa10.47□□□□□ -0.73
PTCD3-205ENST00000464541 A0A096LPE4 126 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 A0A1W2PPZ6 126 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 XRCC5P13010 732 aaKnown RBP10.46□□□□□ -0.73
PTCD3-205ENST00000464541 EPHA1P21709 976 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 ITPKAP23677 461 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 GSK3AP49840 483 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 PIP4K2BP78356 416 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 ADAMTSL4Q6UY14 1074 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 ASAP3Q8TDY4 903 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 NACC1Q96RE7 527 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 WWC3Q9ULE0 1092 aa10.46□□□□□ -0.73
PTCD3-205ENST00000464541 VN1R5Q7Z5H4 357 aa10.45□□□□□ -0.74
PTCD3-205ENST00000464541 DCAF5Q96JK2 942 aa10.45□□□□□ -0.74
PTCD3-205ENST00000464541 BCO2Q9BYV7 579 aa10.45□□□□□ -0.74
PTCD3-205ENST00000464541 ABCB6Q9NP58 842 aa10.45□□□□□ -0.74
PTCD3-205ENST00000464541 OSGEPQ9NPF4 335 aa10.45□□□□□ -0.74
PTCD3-205ENST00000464541 SH2B1Q9NRF2 756 aaPredicted RBP10.45□□□□□ -0.74
PTCD3-205ENST00000464541 TMEM238LA0A1B0GVL6 79 aa10.44□□□□□ -0.74
PTCD3-205ENST00000464541 GRIA4P48058 902 aa10.44□□□□□ -0.74
PTCD3-205ENST00000464541 SETDB1Q15047 1291 aa10.44□□□□□ -0.74
PTCD3-205ENST00000464541 RPS26P11Q5JNZ5 115 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms