RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MAP2K2P36507 400 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 PPP4CP60510 307 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 KMT5BQ4FZB7 885 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 SH3D19Q5HYK7 790 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 MNS1Q8NEH6 495 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 KCTD12Q96CX2 325 aaKnown RBP4.31□□□□□ -1.72
COL8A1-205ENST00000463753 USP25Q9UHP3 1055 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 MRVI1Q9Y6F6 885 aa4.31□□□□□ -1.72
COL8A1-205ENST00000463753 POLD1P28340 1107 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 RBM5P52756 815 aaKnown RBP eCLIP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 FOXD4L5Q5VV16 416 aaPredicted RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 TTC19Q6DKK2 380 aaPredicted RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 NBPF11Q86T75 865 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 NFATC2IPQ8NCF5 419 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 FOXD4L4Q8WXT5 416 aaPredicted RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 FHDC1Q9C0D6 1143 aaPredicted RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 ZNF646O15015 1829 aaPredicted RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 NRXN2Q9P2S2 1712 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 CCDC189A1A4V9 331 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 H0YHG0 523 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 SPTLC1O15269 473 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 CTIFO43310 598 aaKnown RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 KIF1CO43896 1103 aaKnown RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 CFHP08603 1231 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 ATP2B1P20020 1258 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 SARNPP82979 210 aaKnown RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 SLC15A2Q16348 729 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 NBPF9Q3BBW0 867 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 LRSAM1Q6UWE0 723 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 ANKRD20A12PQ8NF67 263 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 SPIRE2Q8WWL2 714 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 C16orf45Q96MC5 204 aaPredicted RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 WBP1LQ9NX94 342 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 TERF2IPQ9NYB0 399 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 ATP1B4Q9UN42 357 aaPredicted RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 IBTKQ9P2D0 1353 aaPredicted RBP4.3□□□□□ -1.72
COL8A1-205ENST00000463753 C4AP0C0L4 1744 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 C4BP0C0L5 1744 aa4.3□□□□□ -1.72
COL8A1-205ENST00000463753 ATP6V1AP38606 617 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 FOXK2Q01167 660 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 BMS1Q14692 1282 aaKnown RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 GGT6Q6P531 493 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 SPC24Q8NBT2 197 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 CHAMP1Q96JM3 812 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 BCORQ6W2J9 1755 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 TTC36A6NLP5 189 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 ANKRD65E5RJM6 399 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 KIF3BO15066 747 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 REC8O95072 547 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 SCP2P22307 547 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 TTLL12Q14166 644 aaPredicted RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 ZSCAN26Q16670 478 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 TSGA10IPQ3SY00 556 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 TJAP1Q5JTD0 557 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 MORN1Q5T089 497 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 TEX35Q5T0J7 233 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 NBPF6Q5VWK0 638 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 NBPF5PQ86XG9 351 aaPredicted RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 NLRP7Q8WX94 980 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 AIDAQ96BJ3 306 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 BORCS6Q96GS4 357 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 NBPF4Q96M43 638 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 MED4Q9NPJ6 270 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 PYCARDQ9ULZ3 195 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 RRP15Q9Y3B9 282 aaKnown RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 LAMB4A4D0S4 1761 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 ROCK1Q13464 1354 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 PPP1R12AO14974 1030 aaPredicted RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 IPO8O15397 1037 aaKnown RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 HOXA2O43364 376 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 ADCY5O95622 1261 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 CALRP27797 417 aaKnown RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 DDIT3P35638 169 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 NBPF10Q6P3W6 841 aaKnown RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 SMC5Q8IY18 1101 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 TXLNBQ8N3L3 684 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 CCDC112Q8NEF3 446 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 ZNF397Q8NF99 534 aaPredicted RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 THAP11Q96EK4 314 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 TSPY26PQ9H489 355 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 RBM28Q9NW13 759 aaKnown RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 SAGE1Q9NXZ1 904 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
COL8A1-205ENST00000463753 TMEM63CQ9P1W3 806 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 COG6Q9Y2V7 657 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 KDM3BQ7LBC6 1761 aa4.29□□□□□ -1.72
COL8A1-205ENST00000463753 ABCC11Q96J66 1382 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 U2SURPO15042 1029 aaKnown RBP4.28□□□□□ -1.72
COL8A1-205ENST00000463753 CAND2O75155 1236 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 KDM4AO75164 1064 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 BCAR3O75815 825 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 GPT2Q8TD30 523 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 L3MBTL2Q969R5 705 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 BEGAINQ9BUH8 593 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 CWC22Q9HCG8 908 aaKnown RBP4.28□□□□□ -1.72
COL8A1-205ENST00000463753 SPTLC3Q9NUV7 552 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 PDZRN3Q9UPQ7 1066 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 NAIPQ13075 1403 aa4.28□□□□□ -1.72
COL8A1-205ENST00000463753 NEBLO76041 1014 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms