RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 MYO3BQ8WXR4 1341 aa18.71■□□□□ 0.59
SMC1A-204ENST00000463684 WNT10BO00744 389 aa18.7■□□□□ 0.58
SMC1A-204ENST00000463684 DDX58O95786 925 aaKnown RBP18.7■□□□□ 0.58
SMC1A-204ENST00000463684 MMP14P50281 582 aa18.7■□□□□ 0.58
SMC1A-204ENST00000463684 PTPN12Q05209 780 aaKnown RBP18.69■□□□□ 0.58
SMC1A-204ENST00000463684 DACT2Q5SW24 774 aa18.69■□□□□ 0.58
SMC1A-204ENST00000463684 STRIP1Q5VSL9 837 aa18.69■□□□□ 0.58
SMC1A-204ENST00000463684 METTL22Q9BUU2 404 aaPredicted RBP18.69■□□□□ 0.58
SMC1A-204ENST00000463684 MXD3Q9BW11 206 aa18.69■□□□□ 0.58
SMC1A-204ENST00000463684 CFHR5Q9BXR6 569 aa18.69■□□□□ 0.58
SMC1A-204ENST00000463684 BSDC1Q9NW68 430 aaPredicted RBP18.69■□□□□ 0.58
SMC1A-204ENST00000463684 MED23Q9ULK4 1368 aa18.68■□□□□ 0.58
SMC1A-204ENST00000463684 ELL2O00472 640 aaPredicted RBP18.68■□□□□ 0.58
SMC1A-204ENST00000463684 ALDH1A1P00352 501 aa18.68■□□□□ 0.58
SMC1A-204ENST00000463684 PRKG1Q13976 671 aa18.68■□□□□ 0.58
SMC1A-204ENST00000463684 CHMP4AQ9BY43 222 aa18.68■□□□□ 0.58
SMC1A-204ENST00000463684 COA1Q9GZY4 146 aa18.68■□□□□ 0.58
SMC1A-204ENST00000463684 MINPP1Q9UNW1 487 aa18.68■□□□□ 0.58
SMC1A-204ENST00000463684 WTIPA6NIX2 430 aaPredicted RBP18.67■□□□□ 0.58
SMC1A-204ENST00000463684 CCT4P50991 539 aaKnown RBP18.67■□□□□ 0.58
SMC1A-204ENST00000463684 CTSWP56202 376 aa18.67■□□□□ 0.58
SMC1A-204ENST00000463684 APOBEC3FQ8IUX4 373 aaKnown RBP18.67■□□□□ 0.58
SMC1A-204ENST00000463684 SASH1O94885 1247 aa18.66■□□□□ 0.58
SMC1A-204ENST00000463684 INHBEP58166 350 aa18.66■□□□□ 0.58
SMC1A-204ENST00000463684 ADAMTS8Q9UP79 889 aa18.66■□□□□ 0.58
SMC1A-204ENST00000463684 MYBBP1AQ9BQG0 1328 aaKnown RBP18.66■□□□□ 0.58
SMC1A-204ENST00000463684 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
SMC1A-204ENST00000463684 GNAI1P63096 354 aa18.65■□□□□ 0.58
SMC1A-204ENST00000463684 CALD1Q05682 793 aaKnown RBP18.65■□□□□ 0.58
SMC1A-204ENST00000463684 LDLRAD1Q5T700 205 aa18.65■□□□□ 0.58
SMC1A-204ENST00000463684 SPRYD7Q5W111 196 aa18.65■□□□□ 0.58
SMC1A-204ENST00000463684 TTLL5Q6EMB2 1281 aa18.65■□□□□ 0.58
SMC1A-204ENST00000463684 TTLL11Q8NHH1 800 aa18.65■□□□□ 0.58
SMC1A-204ENST00000463684 SLC10A4Q96EP9 437 aa18.65■□□□□ 0.58
SMC1A-204ENST00000463684 R3HDMLQ9H3Y0 253 aa18.65■□□□□ 0.58
SMC1A-204ENST00000463684 ANGEL1Q9UNK9 670 aaKnown RBP18.65■□□□□ 0.58
SMC1A-204ENST00000463684 LEMD3Q9Y2U8 911 aa18.65■□□□□ 0.58
SMC1A-204ENST00000463684 MANSC4A6NHS7 340 aaPredicted RBP18.64■□□□□ 0.57
SMC1A-204ENST00000463684 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.57
SMC1A-204ENST00000463684 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
SMC1A-204ENST00000463684 GREM2Q9H772 168 aa18.64■□□□□ 0.57
SMC1A-204ENST00000463684 IFT57Q9NWB7 429 aa18.64■□□□□ 0.57
SMC1A-204ENST00000463684 MAP3K2Q9Y2U5 619 aa18.64■□□□□ 0.57
SMC1A-204ENST00000463684 IGHMBP2P38935 993 aaKnown RBP18.63■□□□□ 0.57
SMC1A-204ENST00000463684 KIAA0825Q8IV33 1275 aa18.63■□□□□ 0.57
SMC1A-204ENST00000463684 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.63■□□□□ 0.57
SMC1A-204ENST00000463684 TRIM17Q9Y577 477 aa18.63■□□□□ 0.57
SMC1A-204ENST00000463684 NEXNQ0ZGT2 675 aa18.62■□□□□ 0.57
SMC1A-204ENST00000463684 IFNL1Q8IU54 200 aa18.62■□□□□ 0.57
SMC1A-204ENST00000463684 PSME4Q14997 1843 aa18.62■□□□□ 0.57
SMC1A-204ENST00000463684 GTF2IP78347 998 aa18.61■□□□□ 0.57
SMC1A-204ENST00000463684 KSR2Q6VAB6 950 aa18.61■□□□□ 0.57
SMC1A-204ENST00000463684 TXNRD3Q86VQ6 643 aa18.61■□□□□ 0.57
SMC1A-204ENST00000463684 ANKRD2Q9GZV1 360 aa18.61■□□□□ 0.57
SMC1A-204ENST00000463684 DEFB129Q9H1M3 183 aa18.61■□□□□ 0.57
SMC1A-204ENST00000463684 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
SMC1A-204ENST00000463684 PI4KAP2A4QPH2 592 aa18.6■□□□□ 0.57
SMC1A-204ENST00000463684 PPP1R12BO60237 982 aaPredicted RBP18.6■□□□□ 0.57
SMC1A-204ENST00000463684 ZBTB48P10074 688 aaPredicted RBP18.6■□□□□ 0.57
SMC1A-204ENST00000463684 DLGAP5Q15398 846 aa18.6■□□□□ 0.57
SMC1A-204ENST00000463684 HABP4Q5JVS0 413 aaKnown RBP18.6■□□□□ 0.57
SMC1A-204ENST00000463684 OTOP1Q7RTM1 612 aa18.6■□□□□ 0.57
SMC1A-204ENST00000463684 PI4KAP1Q8N8J0 262 aa18.6■□□□□ 0.57
SMC1A-204ENST00000463684 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
SMC1A-204ENST00000463684 IGKV5-2P06315 115 aa18.59■□□□□ 0.57
SMC1A-204ENST00000463684 KCNJ4P48050 445 aa18.59■□□□□ 0.57
SMC1A-204ENST00000463684 OTUD7BQ6GQQ9 843 aa18.59■□□□□ 0.57
SMC1A-204ENST00000463684 ZBED3Q96IU2 234 aaPredicted RBP18.59■□□□□ 0.57
SMC1A-204ENST00000463684 MPHOSPH8Q99549 860 aa18.59■□□□□ 0.57
SMC1A-204ENST00000463684 FZD1Q9UP38 647 aa18.59■□□□□ 0.57
SMC1A-204ENST00000463684 MAP3K11Q16584 847 aa18.58■□□□□ 0.56
SMC1A-204ENST00000463684 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.56
SMC1A-204ENST00000463684 ERO1AQ96HE7 468 aa18.58■□□□□ 0.56
SMC1A-204ENST00000463684 PPP2R3BQ9Y5P8 575 aa18.58■□□□□ 0.56
SMC1A-204ENST00000463684 POTEFA5A3E0 1075 aa18.57■□□□□ 0.56
SMC1A-204ENST00000463684 UNCXA6NJT0 531 aa18.57■□□□□ 0.56
SMC1A-204ENST00000463684 APAF1O14727 1248 aa18.57■□□□□ 0.56
SMC1A-204ENST00000463684 MYO1BO43795 1136 aa18.57■□□□□ 0.56
SMC1A-204ENST00000463684 CWF19L2Q2TBE0 894 aaKnown RBP18.57■□□□□ 0.56
SMC1A-204ENST00000463684 WNK4Q96J92 1243 aa18.57■□□□□ 0.56
SMC1A-204ENST00000463684 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
SMC1A-204ENST00000463684 COL1A1P02452 1464 aaPredicted RBP18.57■□□□□ 0.56
SMC1A-204ENST00000463684 H7C1W4 665 aa18.56■□□□□ 0.56
SMC1A-204ENST00000463684 ITGA6P23229 1130 aa18.56■□□□□ 0.56
SMC1A-204ENST00000463684 UBE3BQ7Z3V4 1068 aa18.56■□□□□ 0.56
SMC1A-204ENST00000463684 CLMNQ96JQ2 1002 aa18.56■□□□□ 0.56
SMC1A-204ENST00000463684 CD209Q9NNX6 404 aa18.56■□□□□ 0.56
SMC1A-204ENST00000463684 PTPN22Q9Y2R2 807 aa18.56■□□□□ 0.56
SMC1A-204ENST00000463684 NEURL1BA8MQ27 555 aa18.55■□□□□ 0.56
SMC1A-204ENST00000463684 IGF2BP3O00425 579 aaKnown RBP eCLIP18.55■□□□□ 0.56
SMC1A-204ENST00000463684 KLRK1P26718 216 aa18.55■□□□□ 0.56
SMC1A-204ENST00000463684 DDX10Q13206 875 aaKnown RBP18.55■□□□□ 0.56
SMC1A-204ENST00000463684 MTMR14Q8NCE2 650 aa18.55■□□□□ 0.56
SMC1A-204ENST00000463684 IREB2P48200 963 aaKnown RBP18.54■□□□□ 0.56
SMC1A-204ENST00000463684 CD99L2Q8TCZ2 262 aa18.54■□□□□ 0.56
SMC1A-204ENST00000463684 EFCC1Q9HA90 598 aa18.54■□□□□ 0.56
SMC1A-204ENST00000463684 CHRNDQ07001 517 aa18.53■□□□□ 0.56
SMC1A-204ENST00000463684 TSPYL6Q8N831 410 aa18.53■□□□□ 0.56
SMC1A-204ENST00000463684 PLA2G12BQ9BX93 195 aa18.53■□□□□ 0.56
SMC1A-204ENST00000463684 CLRN2A0PK11 232 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms