RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 MXD3Q9BW11 206 aa15.73■□□□□ 0.11
RPA3-206ENST00000463632 CHMP3Q9Y3E7 222 aa15.73■□□□□ 0.11
RPA3-206ENST00000463632 COL4A1P02462 1669 aa15.73■□□□□ 0.11
RPA3-206ENST00000463632 DDX60Q8IY21 1712 aaKnown RBP15.72■□□□□ 0.11
RPA3-206ENST00000463632 TRPA1O75762 1119 aa15.72■□□□□ 0.11
RPA3-206ENST00000463632 ITGA6P23229 1130 aa15.72■□□□□ 0.11
RPA3-206ENST00000463632 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
RPA3-206ENST00000463632 H7C1W4 665 aa15.71■□□□□ 0.11
RPA3-206ENST00000463632 GCKRQ14397 625 aa15.71■□□□□ 0.11
RPA3-206ENST00000463632 PRAMEF18Q5VWM3 479 aa15.71■□□□□ 0.11
RPA3-206ENST00000463632 DNAAF4Q8WXU2 420 aa15.71■□□□□ 0.11
RPA3-206ENST00000463632 ANKRD2Q9GZV1 360 aa15.71■□□□□ 0.11
RPA3-206ENST00000463632 COA1Q9GZY4 146 aa15.71■□□□□ 0.11
RPA3-206ENST00000463632 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.71■□□□□ 0.11
RPA3-206ENST00000463632 LEMD3Q9Y2U8 911 aa15.71■□□□□ 0.11
RPA3-206ENST00000463632 FAM155AB1AL88 458 aaPredicted RBP15.7■□□□□ 0.1
RPA3-206ENST00000463632 NF2P35240 595 aa15.7■□□□□ 0.1
RPA3-206ENST00000463632 HDAC9Q9UKV0 1011 aa15.7■□□□□ 0.1
RPA3-206ENST00000463632 LRRC37AA6NMS7 1700 aa15.7■□□□□ 0.1
RPA3-206ENST00000463632 MED23Q9ULK4 1368 aa15.7■□□□□ 0.1
RPA3-206ENST00000463632 ZNF804BA4D1E1 1349 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 IL16Q14005 1332 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 FANCIQ9NVI1 1328 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 ANKRD18BA2A2Z9 1011 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 UBE2Q2LH0YL09 131 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 SLC10A3P09131 477 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 GTF2IP78347 998 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 MLLT1Q03111 559 aaPredicted RBP15.69■□□□□ 0.1
RPA3-206ENST00000463632 NBPF9Q3BBW0 867 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 TAF7LQ5H9L4 462 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 TTLL5Q6EMB2 1281 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 MOB2Q70IA6 237 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 GMLQ99445 158 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 RNF186Q9NXI6 227 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 TRPM7Q96QT4 1865 aa15.69■□□□□ 0.1
RPA3-206ENST00000463632 SASH1O94885 1247 aa15.68■□□□□ 0.1
RPA3-206ENST00000463632 EXOSC9Q06265 439 aaKnown RBP15.68■□□□□ 0.1
RPA3-206ENST00000463632 PRKG1Q13976 671 aa15.68■□□□□ 0.1
RPA3-206ENST00000463632 DACT2Q5SW24 774 aa15.68■□□□□ 0.1
RPA3-206ENST00000463632 STRIP1Q5VSL9 837 aa15.68■□□□□ 0.1
RPA3-206ENST00000463632 TXNRD3Q86VQ6 643 aa15.68■□□□□ 0.1
RPA3-206ENST00000463632 KIAA0825Q8IV33 1275 aa15.68■□□□□ 0.1
RPA3-206ENST00000463632 LINS1Q8NG48 757 aa15.68■□□□□ 0.1
RPA3-206ENST00000463632 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
RPA3-206ENST00000463632 PLIN1O60240 522 aa15.67■□□□□ 0.1
RPA3-206ENST00000463632 KLRK1P26718 216 aa15.67■□□□□ 0.1
RPA3-206ENST00000463632 FKBP1BP68106 108 aa15.67■□□□□ 0.1
RPA3-206ENST00000463632 CHRNDQ07001 517 aa15.67■□□□□ 0.1
RPA3-206ENST00000463632 MKRN3Q13064 507 aaKnown RBP15.67■□□□□ 0.1
RPA3-206ENST00000463632 IFIT5Q13325 482 aaKnown RBP15.67■□□□□ 0.1
RPA3-206ENST00000463632 HELBQ8NG08 1087 aaPredicted RBP15.67■□□□□ 0.1
RPA3-206ENST00000463632 CSRNP1Q96S65 589 aa15.67■□□□□ 0.1
RPA3-206ENST00000463632 SAGE1Q9NXZ1 904 aa15.67■□□□□ 0.1
RPA3-206ENST00000463632 PITPNM2Q9BZ72 1349 aa15.67■□□□□ 0.1
RPA3-206ENST00000463632 F6X3S4 739 aa15.66■□□□□ 0.1
RPA3-206ENST00000463632 RASAL3Q86YV0 1011 aa15.66■□□□□ 0.1
RPA3-206ENST00000463632 PLA2G12BQ9BX93 195 aa15.66■□□□□ 0.1
RPA3-206ENST00000463632 THSD7BQ9C0I4 1608 aa15.65■□□□□ 0.1
RPA3-206ENST00000463632 WNT10BO00744 389 aa15.65■□□□□ 0.1
RPA3-206ENST00000463632 VAMP4O75379 141 aa15.65■□□□□ 0.1
RPA3-206ENST00000463632 TAF5LO75529 589 aa15.65■□□□□ 0.1
RPA3-206ENST00000463632 SLC4A10Q6U841 1118 aa15.65■□□□□ 0.1
RPA3-206ENST00000463632 WDR63Q8IWG1 891 aa15.65■□□□□ 0.1
RPA3-206ENST00000463632 FAM9BQ8IZU0 186 aa15.65■□□□□ 0.1
RPA3-206ENST00000463632 F8W031 263 aaPredicted RBP15.64■□□□□ 0.09
RPA3-206ENST00000463632 SNAP23O00161 211 aa15.64■□□□□ 0.09
RPA3-206ENST00000463632 CSF1RP07333 972 aa15.64■□□□□ 0.09
RPA3-206ENST00000463632 DLGAP5Q15398 846 aa15.64■□□□□ 0.09
RPA3-206ENST00000463632 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
RPA3-206ENST00000463632 ARMC9Q7Z3E5 817 aa15.64■□□□□ 0.09
RPA3-206ENST00000463632 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
RPA3-206ENST00000463632 CD209Q9NNX6 404 aa15.64■□□□□ 0.09
RPA3-206ENST00000463632 C9orf78Q9NZ63 289 aaPredicted RBP15.64■□□□□ 0.09
RPA3-206ENST00000463632 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.09
RPA3-206ENST00000463632 CASP7P55210 303 aa15.63■□□□□ 0.09
RPA3-206ENST00000463632 LMBR1LQ6UX01 489 aa15.63■□□□□ 0.09
RPA3-206ENST00000463632 ZNF804AQ7Z570 1209 aa15.63■□□□□ 0.09
RPA3-206ENST00000463632 APOBEC3FQ8IUX4 373 aaKnown RBP15.63■□□□□ 0.09
RPA3-206ENST00000463632 CNNM1Q9NRU3 951 aa15.63■□□□□ 0.09
RPA3-206ENST00000463632 JAG2Q9Y219 1238 aa15.63■□□□□ 0.09
RPA3-206ENST00000463632 ZNF609O15014 1411 aa15.62■□□□□ 0.09
RPA3-206ENST00000463632 TBC1D8O95759 1140 aa15.62■□□□□ 0.09
RPA3-206ENST00000463632 ZEB1P37275 1124 aaPredicted RBP15.62■□□□□ 0.09
RPA3-206ENST00000463632 LDHAL6AQ6ZMR3 332 aa15.62■□□□□ 0.09
RPA3-206ENST00000463632 ZNF316A6NFI3 1004 aaPredicted RBP15.61■□□□□ 0.09
RPA3-206ENST00000463632 MYO1BO43795 1136 aa15.61■□□□□ 0.09
RPA3-206ENST00000463632 MMP14P50281 582 aa15.61■□□□□ 0.09
RPA3-206ENST00000463632 BEND3Q5T5X7 828 aa15.61■□□□□ 0.09
RPA3-206ENST00000463632 CTU1Q7Z7A3 348 aaKnown RBP15.61■□□□□ 0.09
RPA3-206ENST00000463632 ZNF594Q96JF6 807 aaPredicted RBP15.61■□□□□ 0.09
RPA3-206ENST00000463632 ANGEL1Q9UNK9 670 aaKnown RBP15.61■□□□□ 0.09
RPA3-206ENST00000463632 CLRN2A0PK11 232 aa15.6■□□□□ 0.09
RPA3-206ENST00000463632 SOX10P56693 466 aa15.6■□□□□ 0.09
RPA3-206ENST00000463632 FOXO4P98177 505 aa15.6■□□□□ 0.09
RPA3-206ENST00000463632 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
RPA3-206ENST00000463632 VEZTQ9HBM0 779 aa15.6■□□□□ 0.09
RPA3-206ENST00000463632 SCN9AQ15858 1988 aa15.59■□□□□ 0.09
RPA3-206ENST00000463632 GRM8O00222 908 aa15.59■□□□□ 0.09
RPA3-206ENST00000463632 PTPN12Q05209 780 aaKnown RBP15.59■□□□□ 0.09
RPA3-206ENST00000463632 SREBF2Q12772 1141 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms