RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TRPA1O75762 1119 aa25.37■■□□□ 1.65
VARS-221ENST00000463184 CCT4P50991 539 aaKnown RBP25.37■■□□□ 1.65
VARS-221ENST00000463184 CCDC27Q2M243 656 aa25.37■■□□□ 1.65
VARS-221ENST00000463184 WTIPA6NIX2 430 aaPredicted RBP25.36■■□□□ 1.65
VARS-221ENST00000463184 H7C1W4 665 aa25.36■■□□□ 1.65
VARS-221ENST00000463184 CWF19L2Q2TBE0 894 aaKnown RBP25.36■■□□□ 1.65
VARS-221ENST00000463184 TWISTNBQ3B726 338 aaPredicted RBP25.35■■□□□ 1.65
VARS-221ENST00000463184 OGFOD1Q8N543 542 aa25.35■■□□□ 1.65
VARS-221ENST00000463184 COA1Q9GZY4 146 aa25.35■■□□□ 1.65
VARS-221ENST00000463184 LEMD3Q9Y2U8 911 aa25.35■■□□□ 1.65
VARS-221ENST00000463184 MYO3BQ8WXR4 1341 aa25.35■■□□□ 1.65
VARS-221ENST00000463184 SLC4A2P04920 1241 aa25.34■■□□□ 1.65
VARS-221ENST00000463184 IGHMBP2P38935 993 aaKnown RBP25.34■■□□□ 1.65
VARS-221ENST00000463184 MMP14P50281 582 aa25.34■■□□□ 1.65
VARS-221ENST00000463184 DACT2Q5SW24 774 aa25.34■■□□□ 1.65
VARS-221ENST00000463184 STRIP1Q5VSL9 837 aa25.34■■□□□ 1.65
VARS-221ENST00000463184 RASAL3Q86YV0 1011 aa25.34■■□□□ 1.65
VARS-221ENST00000463184 WWC1Q8IX03 1113 aa25.34■■□□□ 1.65
VARS-221ENST00000463184 MYH3P11055 1940 aa25.33■■□□□ 1.65
VARS-221ENST00000463184 G2E3Q7L622 706 aa25.33■■□□□ 1.65
VARS-221ENST00000463184 UBE3BQ7Z3V4 1068 aa25.33■■□□□ 1.65
VARS-221ENST00000463184 PLA2G12BQ9BX93 195 aa25.33■■□□□ 1.65
VARS-221ENST00000463184 AKAP11Q9UKA4 1901 aa25.33■■□□□ 1.65
VARS-221ENST00000463184 PAPPA2Q9BXP8 1791 aa25.32■■□□□ 1.64
VARS-221ENST00000463184 NBPF9Q3BBW0 867 aa25.32■■□□□ 1.64
VARS-221ENST00000463184 GCKRQ14397 625 aa25.31■■□□□ 1.64
VARS-221ENST00000463184 FBXW7Q969H0 707 aa25.31■■□□□ 1.64
VARS-221ENST00000463184 ANKRD2Q9GZV1 360 aa25.31■■□□□ 1.64
VARS-221ENST00000463184 WNT10BO00744 389 aa25.3■■□□□ 1.64
VARS-221ENST00000463184 NCBP3Q53F19 620 aaKnown RBP25.3■■□□□ 1.64
VARS-221ENST00000463184 MPHOSPH8Q99549 860 aa25.3■■□□□ 1.64
VARS-221ENST00000463184 MXD3Q9BW11 206 aa25.3■■□□□ 1.64
VARS-221ENST00000463184 SCAF8Q9UPN6 1271 aaKnown RBP25.3■■□□□ 1.64
VARS-221ENST00000463184 IL16Q14005 1332 aa25.3■■□□□ 1.64
VARS-221ENST00000463184 ITGA6P23229 1130 aa25.29■■□□□ 1.64
VARS-221ENST00000463184 TTLL5Q6EMB2 1281 aa25.29■■□□□ 1.64
VARS-221ENST00000463184 TXNRD3Q86VQ6 643 aa25.29■■□□□ 1.64
VARS-221ENST00000463184 MYH16Q9H6N6 1097 aa25.29■■□□□ 1.64
VARS-221ENST00000463184 ZNF804BA4D1E1 1349 aa25.29■■□□□ 1.64
VARS-221ENST00000463184 CSF1RP07333 972 aa25.28■■□□□ 1.64
VARS-221ENST00000463184 FLIIQ13045 1269 aa25.28■■□□□ 1.64
VARS-221ENST00000463184 CCDC184Q52MB2 194 aa25.28■■□□□ 1.64
VARS-221ENST00000463184 MOB2Q70IA6 237 aa25.28■■□□□ 1.64
VARS-221ENST00000463184 UBE2Q2LH0YL09 131 aa25.27■■□□□ 1.64
VARS-221ENST00000463184 NF2P35240 595 aa25.27■■□□□ 1.64
VARS-221ENST00000463184 CASP7P55210 303 aa25.27■■□□□ 1.64
VARS-221ENST00000463184 PRAMEF18Q5VWM3 479 aa25.27■■□□□ 1.64
VARS-221ENST00000463184 DNAAF4Q8WXU2 420 aa25.27■■□□□ 1.64
VARS-221ENST00000463184 SPEF2Q9C093 1822 aa25.27■■□□□ 1.64
VARS-221ENST00000463184 FKBP5Q13451 457 aaPredicted RBP25.26■■□□□ 1.63
VARS-221ENST00000463184 TTLL12Q14166 644 aaPredicted RBP25.26■■□□□ 1.63
VARS-221ENST00000463184 CTU1Q7Z7A3 348 aaKnown RBP25.26■■□□□ 1.63
VARS-221ENST00000463184 LINS1Q8NG48 757 aa25.26■■□□□ 1.63
VARS-221ENST00000463184 HDAC9Q9UKV0 1011 aa25.26■■□□□ 1.63
VARS-221ENST00000463184 KCNJ4P48050 445 aa25.24■■□□□ 1.63
VARS-221ENST00000463184 KLRK1P26718 216 aa25.23■■□□□ 1.63
VARS-221ENST00000463184 CHRNDQ07001 517 aa25.23■■□□□ 1.63
VARS-221ENST00000463184 APOBEC3FQ8IUX4 373 aaKnown RBP25.23■■□□□ 1.63
VARS-221ENST00000463184 KIAA0825Q8IV33 1275 aa25.23■■□□□ 1.63
VARS-221ENST00000463184 ZNF646O15015 1829 aaPredicted RBP25.22■■□□□ 1.63
VARS-221ENST00000463184 ANKRD18BA2A2Z9 1011 aa25.22■■□□□ 1.63
VARS-221ENST00000463184 SASH1O94885 1247 aa25.22■■□□□ 1.63
VARS-221ENST00000463184 TM4SF4P48230 202 aa25.22■■□□□ 1.63
VARS-221ENST00000463184 GTF2IP78347 998 aa25.22■■□□□ 1.63
VARS-221ENST00000463184 CD209Q9NNX6 404 aa25.22■■□□□ 1.63
VARS-221ENST00000463184 SLC34A2O95436 690 aa25.21■■□□□ 1.63
VARS-221ENST00000463184 ARMC9Q7Z3E5 817 aa25.21■■□□□ 1.63
VARS-221ENST00000463184 ZBED3Q96IU2 234 aaPredicted RBP25.21■■□□□ 1.63
VARS-221ENST00000463184 FANCIQ9NVI1 1328 aa25.2■■□□□ 1.62
VARS-221ENST00000463184 VAMP4O75379 141 aa25.2■■□□□ 1.62
VARS-221ENST00000463184 CACNA1FO60840 1977 aa25.19■■□□□ 1.62
VARS-221ENST00000463184 PKN2Q16513 984 aaKnown RBP25.19■■□□□ 1.62
VARS-221ENST00000463184 C15orf52Q6ZUT6 534 aaKnown RBP25.19■■□□□ 1.62
VARS-221ENST00000463184 WDR63Q8IWG1 891 aa25.19■■□□□ 1.62
VARS-221ENST00000463184 TBC1D8O95759 1140 aa25.18■■□□□ 1.62
VARS-221ENST00000463184 PTPN12Q05209 780 aaKnown RBP25.18■■□□□ 1.62
VARS-221ENST00000463184 SREBF2Q12772 1141 aa25.18■■□□□ 1.62
VARS-221ENST00000463184 IFIT5Q13325 482 aaKnown RBP25.18■■□□□ 1.62
VARS-221ENST00000463184 SOX10P56693 466 aa25.17■■□□□ 1.62
VARS-221ENST00000463184 NOM1Q5C9Z4 860 aaKnown RBP25.17■■□□□ 1.62
VARS-221ENST00000463184 ZNF296Q8WUU4 475 aaPredicted RBP25.17■■□□□ 1.62
VARS-221ENST00000463184 IRS2Q9Y4H2 1338 aa25.16■■□□□ 1.62
VARS-221ENST00000463184 TAF5LO75529 589 aa25.16■■□□□ 1.62
VARS-221ENST00000463184 FOXO4P98177 505 aa25.16■■□□□ 1.62
VARS-221ENST00000463184 DLGAP5Q15398 846 aa25.16■■□□□ 1.62
VARS-221ENST00000463184 MTMR14Q8NCE2 650 aa25.16■■□□□ 1.62
VARS-221ENST00000463184 MKRN3Q13064 507 aaKnown RBP25.15■■□□□ 1.62
VARS-221ENST00000463184 PRKG1Q13976 671 aa25.15■■□□□ 1.62
VARS-221ENST00000463184 LDLRAD1Q5T700 205 aa25.15■■□□□ 1.62
VARS-221ENST00000463184 COL1A1P02452 1464 aaPredicted RBP25.15■■□□□ 1.62
VARS-221ENST00000463184 GPR25O00155 361 aa25.14■■□□□ 1.62
VARS-221ENST00000463184 SNAP23O00161 211 aa25.14■■□□□ 1.62
VARS-221ENST00000463184 IL1R1P14778 569 aa25.14■■□□□ 1.62
VARS-221ENST00000463184 EXOSC9Q06265 439 aaKnown RBP25.14■■□□□ 1.62
VARS-221ENST00000463184 BEND3Q5T5X7 828 aa25.14■■□□□ 1.62
VARS-221ENST00000463184 ZNF804AQ7Z570 1209 aa25.14■■□□□ 1.62
VARS-221ENST00000463184 HELBQ8NG08 1087 aaPredicted RBP25.14■■□□□ 1.62
VARS-221ENST00000463184 CFHR5Q9BXR6 569 aa25.14■■□□□ 1.62
VARS-221ENST00000463184 DEFB129Q9H1M3 183 aa25.14■■□□□ 1.62
VARS-221ENST00000463184 MRS2Q9HD23 443 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms