RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 ADAM33Q9BZ11 813 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 SCUBE2Q9NQ36 999 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 MIS18AQ9NYP9 233 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 TSKSQ9UJT2 592 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 ERBB4Q15303 1308 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 ANKRD36CQ5JPF3 1778 aa10.5□□□□□ -0.73
GARNL3-212ENST00000463005 KDM3BQ7LBC6 1761 aa10.5□□□□□ -0.73
GARNL3-212ENST00000463005 TCERG1O14776 1098 aaKnown RBP10.5□□□□□ -0.73
GARNL3-212ENST00000463005 NTSR2O95665 410 aa10.5□□□□□ -0.73
GARNL3-212ENST00000463005 EIF4A1P60842 406 aaKnown RBP10.5□□□□□ -0.73
GARNL3-212ENST00000463005 MPNDQ8N594 471 aa10.5□□□□□ -0.73
GARNL3-212ENST00000463005 GLIS2Q9BZE0 524 aaPredicted RBP10.5□□□□□ -0.73
GARNL3-212ENST00000463005 UBN2Q6ZU65 1347 aa10.5□□□□□ -0.73
GARNL3-212ENST00000463005 H7C1D1 291 aa10.49□□□□□ -0.73
GARNL3-212ENST00000463005 MYL6BP14649 208 aa10.49□□□□□ -0.73
GARNL3-212ENST00000463005 GMPSP49915 693 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-212ENST00000463005 KIAA2012Q0VF49 1180 aa10.49□□□□□ -0.73
GARNL3-212ENST00000463005 TTLL12Q14166 644 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-212ENST00000463005 AMHR2Q16671 573 aa10.49□□□□□ -0.73
GARNL3-212ENST00000463005 DPP8Q6V1X1 898 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-212ENST00000463005 UTP14AQ9BVJ6 771 aaKnown RBP10.49□□□□□ -0.73
GARNL3-212ENST00000463005 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
GARNL3-212ENST00000463005 CNOT7Q9UIV1 285 aaKnown RBP10.49□□□□□ -0.73
GARNL3-212ENST00000463005 LHX6Q9UPM6 363 aa10.49□□□□□ -0.73
GARNL3-212ENST00000463005 PPP2R1AP30153 589 aa10.48□□□□□ -0.73
GARNL3-212ENST00000463005 HIRAP54198 1017 aaPredicted RBP10.48□□□□□ -0.73
GARNL3-212ENST00000463005 C6orf132Q5T0Z8 1188 aa10.48□□□□□ -0.73
GARNL3-212ENST00000463005 PADI6Q6TGC4 694 aa10.48□□□□□ -0.73
GARNL3-212ENST00000463005 TMC4Q7Z404 712 aa10.48□□□□□ -0.73
GARNL3-212ENST00000463005 DPF2Q92785 391 aa10.48□□□□□ -0.73
GARNL3-212ENST00000463005 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
GARNL3-212ENST00000463005 ZNF408Q9H9D4 720 aa10.48□□□□□ -0.73
GARNL3-212ENST00000463005 PDE4DIPQ5VU43 2346 aa10.48□□□□□ -0.73
GARNL3-212ENST00000463005 HUNKP57058 714 aa10.47□□□□□ -0.73
GARNL3-212ENST00000463005 HSP90AB3PQ58FF7 597 aa10.47□□□□□ -0.73
GARNL3-212ENST00000463005 ZNF710Q8N1W2 664 aa10.47□□□□□ -0.73
GARNL3-212ENST00000463005 PNNQ9H307 717 aaKnown RBP10.47□□□□□ -0.73
GARNL3-212ENST00000463005 SAGE1Q9NXZ1 904 aa10.47□□□□□ -0.73
GARNL3-212ENST00000463005 ABCC4O15439 1325 aa10.47□□□□□ -0.73
GARNL3-212ENST00000463005 LAMB2P55268 1798 aa10.47□□□□□ -0.73
GARNL3-212ENST00000463005 RAD17O75943 681 aa10.46□□□□□ -0.73
GARNL3-212ENST00000463005 RGMBQ6NW40 437 aa10.46□□□□□ -0.73
GARNL3-212ENST00000463005 DDX46Q7L014 1031 aaKnown RBP10.46□□□□□ -0.73
GARNL3-212ENST00000463005 USP48Q86UV5 1035 aa10.46□□□□□ -0.73
GARNL3-212ENST00000463005 C2orf69Q8N8R5 385 aa10.46□□□□□ -0.73
GARNL3-212ENST00000463005 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
GARNL3-212ENST00000463005 MS4A1P11836 297 aa10.45□□□□□ -0.74
GARNL3-212ENST00000463005 GRAPQ13588 217 aa10.45□□□□□ -0.74
GARNL3-212ENST00000463005 GRAPLQ8TC17 118 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-212ENST00000463005 TRPM4Q8TD43 1214 aa10.45□□□□□ -0.74
GARNL3-212ENST00000463005 GBA2Q9HCG7 927 aaPredicted RBP10.45□□□□□ -0.74
GARNL3-212ENST00000463005 TAF1P21675 1872 aa10.44□□□□□ -0.74
GARNL3-212ENST00000463005 FAM155AB1AL88 458 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-212ENST00000463005 RPS12P25398 132 aaKnown RBP10.44□□□□□ -0.74
GARNL3-212ENST00000463005 MDM2Q00987 491 aaPredicted RBP10.44□□□□□ -0.74
GARNL3-212ENST00000463005 LRP10Q7Z4F1 713 aa10.44□□□□□ -0.74
GARNL3-212ENST00000463005 SLC51AQ86UW1 340 aa10.44□□□□□ -0.74
GARNL3-212ENST00000463005 DCPSQ96C86 337 aaKnown RBP10.44□□□□□ -0.74
GARNL3-212ENST00000463005 ZIC5Q96T25 663 aa10.44□□□□□ -0.74
GARNL3-212ENST00000463005 BABAM1Q9NWV8 329 aa10.44□□□□□ -0.74
GARNL3-212ENST00000463005 SH3TC1Q8TE82 1336 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 YDJCA8MPS7 323 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 RIMBP2O15034 1052 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 COL9A1P20849 921 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 KIF23Q02241 960 aaPredicted RBP10.43□□□□□ -0.74
GARNL3-212ENST00000463005 TCIRG1Q13488 830 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 NFE2L2Q16236 605 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 WASHC4Q2M389 1173 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 KRT26Q7Z3Y9 468 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 NLRP10Q86W26 655 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 PLEKHF1Q96S99 279 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 RNF186Q9NXI6 227 aa10.43□□□□□ -0.74
GARNL3-212ENST00000463005 TRPA1O75762 1119 aa10.42□□□□□ -0.74
GARNL3-212ENST00000463005 HCLS1P14317 486 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-212ENST00000463005 EIF2S2P20042 333 aaKnown RBP10.42□□□□□ -0.74
GARNL3-212ENST00000463005 ZNF157P51786 506 aaPredicted RBP10.42□□□□□ -0.74
GARNL3-212ENST00000463005 DDX10Q13206 875 aaKnown RBP10.42□□□□□ -0.74
GARNL3-212ENST00000463005 COPS6Q7L5N1 327 aa10.42□□□□□ -0.74
GARNL3-212ENST00000463005 SAMD7Q7Z3H4 446 aa10.42□□□□□ -0.74
GARNL3-212ENST00000463005 EYA3Q99504 573 aa10.42□□□□□ -0.74
GARNL3-212ENST00000463005 THUMPD2Q9BTF0 503 aaKnown RBP10.42□□□□□ -0.74
GARNL3-212ENST00000463005 TRMT112Q9UI30 125 aaKnown RBP10.42□□□□□ -0.74
GARNL3-212ENST00000463005 PSMD14O00487 310 aa10.41□□□□□ -0.74
GARNL3-212ENST00000463005 PKN2Q16513 984 aaKnown RBP10.41□□□□□ -0.74
GARNL3-212ENST00000463005 MAMSTRQ6ZN01 415 aa10.41□□□□□ -0.74
GARNL3-212ENST00000463005 CTU1Q7Z7A3 348 aaKnown RBP10.41□□□□□ -0.74
GARNL3-212ENST00000463005 OTUD5Q96G74 571 aa10.41□□□□□ -0.74
GARNL3-212ENST00000463005 CSRNP1Q96S65 589 aa10.41□□□□□ -0.74
GARNL3-212ENST00000463005 FAM198AQ9UFP1 575 aa10.41□□□□□ -0.74
GARNL3-212ENST00000463005 TSPYL4Q9UJ04 414 aa10.41□□□□□ -0.74
GARNL3-212ENST00000463005 NSFL1CQ9UNZ2 370 aaKnown RBP10.41□□□□□ -0.74
GARNL3-212ENST00000463005 LRRC37AA6NMS7 1700 aa10.41□□□□□ -0.74
GARNL3-212ENST00000463005 DDX60Q8IY21 1712 aaKnown RBP10.41□□□□□ -0.74
GARNL3-212ENST00000463005 MAPK8IP3Q9UPT6 1336 aa10.4□□□□□ -0.74
GARNL3-212ENST00000463005 SHTN1A0MZ66 631 aa10.4□□□□□ -0.74
GARNL3-212ENST00000463005 SLC10A3P09131 477 aa10.4□□□□□ -0.74
GARNL3-212ENST00000463005 SF3B3Q15393 1217 aaKnown RBP10.4□□□□□ -0.74
GARNL3-212ENST00000463005 TBC1D10BQ4KMP7 808 aaPredicted RBP10.4□□□□□ -0.74
GARNL3-212ENST00000463005 PRPF38BQ5VTL8 546 aaKnown RBP10.4□□□□□ -0.74
GARNL3-212ENST00000463005 SULF1Q8IWU6 871 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms