RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 LRRFIP2Q9Y608 721 aaKnown RBP23.2■■□□□ 1.3
CDKN1A-206ENST00000462537 SHTN1A0MZ66 631 aa23.19■■□□□ 1.3
CDKN1A-206ENST00000462537 USP17L3A6NCW0 530 aa23.19■■□□□ 1.3
CDKN1A-206ENST00000462537 USP17L4A6NCW7 530 aa23.19■■□□□ 1.3
CDKN1A-206ENST00000462537 VIL1P09327 827 aaKnown RBP23.19■■□□□ 1.3
CDKN1A-206ENST00000462537 USP17L1Q7RTZ2 530 aa23.19■■□□□ 1.3
CDKN1A-206ENST00000462537 KLHDC4Q8TBB5 520 aa23.19■■□□□ 1.3
CDKN1A-206ENST00000462537 MROH5Q6ZUA9 1318 aa23.18■■□□□ 1.3
CDKN1A-206ENST00000462537 HTRA3P83110 453 aa23.18■■□□□ 1.3
CDKN1A-206ENST00000462537 RSBN1LQ6PCB5 846 aaPredicted RBP23.18■■□□□ 1.3
CDKN1A-206ENST00000462537 GNAI3P08754 354 aa23.17■■□□□ 1.3
CDKN1A-206ENST00000462537 LRRC24Q50LG9 513 aa23.17■■□□□ 1.3
CDKN1A-206ENST00000462537 CNTROBQ8N137 903 aa23.17■■□□□ 1.3
CDKN1A-206ENST00000462537 TRPM4Q8TD43 1214 aa23.17■■□□□ 1.3
CDKN1A-206ENST00000462537 METTL24Q5JXM2 366 aa23.16■■□□□ 1.3
CDKN1A-206ENST00000462537 FTSJ3Q8IY81 847 aaKnown RBP23.16■■□□□ 1.3
CDKN1A-206ENST00000462537 RIPOR2Q9Y4F9 1068 aa23.16■■□□□ 1.3
CDKN1A-206ENST00000462537 SAMD7Q7Z3H4 446 aa23.15■■□□□ 1.3
CDKN1A-206ENST00000462537 ZNF804AQ7Z570 1209 aa23.15■■□□□ 1.3
CDKN1A-206ENST00000462537 AGBL3Q8NEM8 1001 aa23.15■■□□□ 1.3
CDKN1A-206ENST00000462537 PASKQ96RG2 1323 aa23.14■■□□□ 1.3
CDKN1A-206ENST00000462537 ITGBL1O95965 494 aaPredicted RBP23.14■■□□□ 1.29
CDKN1A-206ENST00000462537 TBC1D10BQ4KMP7 808 aaPredicted RBP23.14■■□□□ 1.29
CDKN1A-206ENST00000462537 RBM26Q5T8P6 1007 aaKnown RBP23.14■■□□□ 1.29
CDKN1A-206ENST00000462537 C15orf52Q6ZUT6 534 aaKnown RBP23.14■■□□□ 1.29
CDKN1A-206ENST00000462537 TMEM57Q8N5G2 664 aa23.14■■□□□ 1.29
CDKN1A-206ENST00000462537 CD209Q9NNX6 404 aa23.14■■□□□ 1.29
CDKN1A-206ENST00000462537 IRS2Q9Y4H2 1338 aa23.13■■□□□ 1.29
CDKN1A-206ENST00000462537 ZNF646O15015 1829 aaPredicted RBP23.13■■□□□ 1.29
CDKN1A-206ENST00000462537 RFX5P48382 616 aaPredicted RBP23.13■■□□□ 1.29
CDKN1A-206ENST00000462537 HIRAP54198 1017 aaPredicted RBP23.13■■□□□ 1.29
CDKN1A-206ENST00000462537 UBE4AQ14139 1066 aa23.13■■□□□ 1.29
CDKN1A-206ENST00000462537 STRIP1Q5VSL9 837 aa23.13■■□□□ 1.29
CDKN1A-206ENST00000462537 ZNF609O15014 1411 aa23.12■■□□□ 1.29
CDKN1A-206ENST00000462537 PTPN12Q05209 780 aaKnown RBP23.12■■□□□ 1.29
CDKN1A-206ENST00000462537 TTLL5Q6EMB2 1281 aa23.12■■□□□ 1.29
CDKN1A-206ENST00000462537 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
CDKN1A-206ENST00000462537 MXD3Q9BW11 206 aa23.12■■□□□ 1.29
CDKN1A-206ENST00000462537 CEP350Q5VT06 3117 aa23.12■■□□□ 1.29
CDKN1A-206ENST00000462537 EYA2O00167 538 aa23.11■■□□□ 1.29
CDKN1A-206ENST00000462537 GTF2IP78347 998 aa23.11■■□□□ 1.29
CDKN1A-206ENST00000462537 KIF4BQ2VIQ3 1234 aa23.11■■□□□ 1.29
CDKN1A-206ENST00000462537 DACT2Q5SW24 774 aa23.11■■□□□ 1.29
CDKN1A-206ENST00000462537 SIL1Q9H173 461 aa23.11■■□□□ 1.29
CDKN1A-206ENST00000462537 MYO3BQ8WXR4 1341 aa23.1■■□□□ 1.29
CDKN1A-206ENST00000462537 EGFRP00533 1210 aa23.1■■□□□ 1.29
CDKN1A-206ENST00000462537 USP17L8P0C7I0 530 aa23.1■■□□□ 1.29
CDKN1A-206ENST00000462537 ZC3H15Q8WU90 426 aaKnown RBP23.1■■□□□ 1.29
CDKN1A-206ENST00000462537 GMLQ99445 158 aa23.1■■□□□ 1.29
CDKN1A-206ENST00000462537 PDE8BO95263 885 aa23.09■■□□□ 1.29
CDKN1A-206ENST00000462537 GNAI2P04899 355 aa23.09■■□□□ 1.29
CDKN1A-206ENST00000462537 GYG1P46976 350 aa23.09■■□□□ 1.29
CDKN1A-206ENST00000462537 ITPRIPQ8IWB1 547 aa23.09■■□□□ 1.29
CDKN1A-206ENST00000462537 CREBZFQ9NS37 354 aa23.09■■□□□ 1.29
CDKN1A-206ENST00000462537 IL1R1P14778 569 aa23.08■■□□□ 1.29
CDKN1A-206ENST00000462537 VPS37DQ86XT2 251 aa23.08■■□□□ 1.29
CDKN1A-206ENST00000462537 DNAJC5GQ8N7S2 189 aa23.08■■□□□ 1.29
CDKN1A-206ENST00000462537 VGLL2Q8N8G2 317 aa23.08■■□□□ 1.29
CDKN1A-206ENST00000462537 PGAP2Q9UHJ9 254 aa23.08■■□□□ 1.29
CDKN1A-206ENST00000462537 TMEM88BA6NKF7 163 aa23.07■■□□□ 1.28
CDKN1A-206ENST00000462537 TRAF5O00463 557 aa23.07■■□□□ 1.28
CDKN1A-206ENST00000462537 SRGAP3O43295 1099 aa23.07■■□□□ 1.28
CDKN1A-206ENST00000462537 HIBADHP31937 336 aaKnown RBP23.07■■□□□ 1.28
CDKN1A-206ENST00000462537 ZNF280AP59817 542 aaPredicted RBP23.07■■□□□ 1.28
CDKN1A-206ENST00000462537 OGFOD1Q8N543 542 aa23.07■■□□□ 1.28
CDKN1A-206ENST00000462537 GLIS2Q9BZE0 524 aaPredicted RBP23.07■■□□□ 1.28
CDKN1A-206ENST00000462537 MYOZ2Q9NPC6 264 aa23.07■■□□□ 1.28
CDKN1A-206ENST00000462537 PA2G4Q9UQ80 394 aaKnown RBP23.07■■□□□ 1.28
CDKN1A-206ENST00000462537 RLBP1P12271 317 aa23.06■■□□□ 1.28
CDKN1A-206ENST00000462537 FMR1Q06787 632 aaKnown RBP eCLIP23.06■■□□□ 1.28
CDKN1A-206ENST00000462537 PUM3Q15397 648 aaKnown RBP23.06■■□□□ 1.28
CDKN1A-206ENST00000462537 KLRG1Q96E93 195 aa23.06■■□□□ 1.28
CDKN1A-206ENST00000462537 FBXO3Q9UK99 471 aa23.06■■□□□ 1.28
CDKN1A-206ENST00000462537 JAG2Q9Y219 1238 aa23.06■■□□□ 1.28
CDKN1A-206ENST00000462537 TRPM7Q96QT4 1865 aa23.06■■□□□ 1.28
CDKN1A-206ENST00000462537 CIAO1O76071 339 aa23.05■■□□□ 1.28
CDKN1A-206ENST00000462537 CAVIN4Q5BKX8 364 aa23.05■■□□□ 1.28
CDKN1A-206ENST00000462537 ATG9AQ7Z3C6 839 aa23.05■■□□□ 1.28
CDKN1A-206ENST00000462537 KIAA0825Q8IV33 1275 aa23.05■■□□□ 1.28
CDKN1A-206ENST00000462537 DCPSQ96C86 337 aaKnown RBP23.05■■□□□ 1.28
CDKN1A-206ENST00000462537 FAM84BQ96KN1 310 aaPredicted RBP23.05■■□□□ 1.28
CDKN1A-206ENST00000462537 RCAN3Q9UKA8 241 aa23.05■■□□□ 1.28
CDKN1A-206ENST00000462537 IFIT1P09914 478 aaKnown RBP23.04■■□□□ 1.28
CDKN1A-206ENST00000462537 SCARF1Q14162 830 aa23.04■■□□□ 1.28
CDKN1A-206ENST00000462537 CDC37L1Q7L3B6 337 aa23.04■■□□□ 1.28
CDKN1A-206ENST00000462537 USP48Q86UV5 1035 aa23.04■■□□□ 1.28
CDKN1A-206ENST00000462537 COPRSQ9NQ92 184 aa23.04■■□□□ 1.28
CDKN1A-206ENST00000462537 CEP126Q9P2H0 1117 aa23.04■■□□□ 1.28
CDKN1A-206ENST00000462537 HDAC9Q9UKV0 1011 aa23.04■■□□□ 1.28
CDKN1A-206ENST00000462537 FRAT2O75474 233 aaPredicted RBP23.03■■□□□ 1.28
CDKN1A-206ENST00000462537 MS4A1P11836 297 aa23.03■■□□□ 1.28
CDKN1A-206ENST00000462537 SLC5A1P13866 664 aa23.03■■□□□ 1.28
CDKN1A-206ENST00000462537 IL15P40933 162 aaPredicted RBP23.03■■□□□ 1.28
CDKN1A-206ENST00000462537 MTX1Q13505 466 aa23.03■■□□□ 1.28
CDKN1A-206ENST00000462537 PANK1Q8TE04 598 aa23.03■■□□□ 1.28
CDKN1A-206ENST00000462537 GGA3Q9NZ52 723 aa23.03■■□□□ 1.28
CDKN1A-206ENST00000462537 SASH1O94885 1247 aa23.02■■□□□ 1.28
CDKN1A-206ENST00000462537 FGFR2P21802 821 aa23.02■■□□□ 1.28
CDKN1A-206ENST00000462537 KRT26Q7Z3Y9 468 aa23.02■■□□□ 1.28
CDKN1A-206ENST00000462537 TDRD7Q8NHU6 1098 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms