RNA–Protein interactions for RNA: ENST00000462410.5

TRAF5-204, Transcript of TNF receptor associated factor 5, human

TSL 2

Gene TRAF5, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAF5-204	ENST00000462410	KDR	P35968	1356 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	CAMSAP1	Q5T5Y3	1602 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	PRKCSH	P14314	528 aa	Predicted RBP	11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	GNA11	P29992	359 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	LZTS2	Q9BRK4	669 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	ACBD3	Q9H3P7	528 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	SMARCA5	O60264	1052 aa	Predicted RBP	11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	PDE1A	P54750	535 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	TNMD	Q9H2S6	317 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	STX8	Q9UNK0	236 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	USP16	Q9Y5T5	823 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	ALK	Q9UM73	1620 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	CROCC2	H7BZ55	1655 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	IGSF3	O75054	1194 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	NCBP1	Q09161	790 aa	Known RBP	11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	OTUD7B	Q6GQQ9	843 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	PPFIBP1	Q86W92	1011 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	TICAM2	Q86XR7	235 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	FIBP	O43427	364 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	GIGYF1	O75420	1035 aa	Predicted RBP	11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	NAP1L1	P55209	391 aa	Known RBP	11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	DLGAP5	Q15398	846 aa		11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	RRP36	Q96EU6	259 aa	Known RBP	11.45	□□□□□ -0.58
TRAF5-204	ENST00000462410	RTN1	Q16799	776 aa		11.44	□□□□□ -0.58
TRAF5-204	ENST00000462410	PPIP5K2	O43314	1243 aa		11.44	□□□□□ -0.58
TRAF5-204	ENST00000462410	TSPY26P	Q9H489	355 aa		11.44	□□□□□ -0.58
TRAF5-204	ENST00000462410	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
TRAF5-204	ENST00000462410	GJA3	Q9Y6H8	435 aa		11.44	□□□□□ -0.58
TRAF5-204	ENST00000462410	HOMER1	Q86YM7	354 aa		11.44	□□□□□ -0.58
TRAF5-204	ENST00000462410	MCM9	Q9NXL9	1143 aa		11.44	□□□□□ -0.58
TRAF5-204	ENST00000462410	CAVIN2	O95810	425 aa		11.44	□□□□□ -0.58
TRAF5-204	ENST00000462410	CEP85	Q6P2H3	762 aa		11.44	□□□□□ -0.58
TRAF5-204	ENST00000462410	SSFA2	P28290	1259 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	RBM25	P49756	843 aa	Known RBP	11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	PLEKHG2	Q9H7P9	1386 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	ZFYVE27	Q5T4F4	411 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	VPS36	Q86VN1	386 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	SMARCC2	Q8TAQ2	1214 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	ATP10D	Q9P241	1426 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	CTSW	P56202	376 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	RTKN2	Q8IZC4	609 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	PAF1	Q8N7H5	531 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	BICC1	Q9H694	974 aa	Known RBP	11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	KCNG1	Q9UIX4	513 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	PC	P11498	1178 aa	Known RBP	11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	FAM114A1	Q8IWE2	563 aa		11.43	□□□□□ -0.58
TRAF5-204	ENST00000462410	UBE4A	Q14139	1066 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	RBM26	Q5T8P6	1007 aa	Known RBP	11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	ZNF397	Q8NF99	534 aa	Predicted RBP	11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	TMEM87B	Q96K49	555 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	IVNS1ABP	Q9Y6Y0	642 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	SPDYE3	A6NKU9	549 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	RIMBP2	O15034	1052 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	A1BG	P04217	495 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	VPS72	Q15906	364 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	APPBP2	Q92624	585 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	DDX17	Q92841	729 aa	Known RBP	11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	TEKT1	Q969V4	418 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	FAM89A	Q96GI7	184 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	NUP62CL	Q9H1M0	184 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	LGR6	Q9HBX8	967 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	RMND1	Q9NWS8	449 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	ORC3	Q9UBD5	711 aa	Predicted RBP	11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	TRPM1	Q7Z4N2	1603 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	CWF19L2	Q2TBE0	894 aa	Known RBP	11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	CCDC93	Q567U6	631 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	FERMT2	Q96AC1	680 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	CSAD	Q9Y600	493 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	CCDC171	Q6TFL3	1326 aa		11.42	□□□□□ -0.58
TRAF5-204	ENST00000462410	KIF22	Q14807	665 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	FKBP15	Q5T1M5	1219 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	TANGO6	Q9C0B7	1094 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	ATG3	Q9NT62	314 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	CDC42BPB	Q9Y5S2	1711 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	XDH	P47989	1333 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	CRB1	P82279	1406 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	MRE11	P49959	708 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	PICALM	Q13492	652 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	GPR108	Q9NPR9	543 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410		F8W031	263 aa	Predicted RBP	11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	UBA7	P41226	1012 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	CRKL	P46109	303 aa	Known RBP	11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	KAT6B	Q8WYB5	2073 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	TFCP2	Q12800	502 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	TNNI3K	Q59H18	835 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	MAGEB6	Q8N7X4	407 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	FPGT-TNNI3K	V9GXZ4	949 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	MED14	O60244	1454 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	C1orf167	Q5SNV9	1468 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	CLTCL1	P53675	1640 aa		11.41	□□□□□ -0.58
TRAF5-204	ENST00000462410	RPS6KA4	O75676	772 aa		11.4	□□□□□ -0.58
TRAF5-204	ENST00000462410	BCS1L	Q9Y276	419 aa		11.4	□□□□□ -0.58
TRAF5-204	ENST00000462410	CLTC	Q00610	1675 aa	Known RBP	11.4	□□□□□ -0.58
TRAF5-204	ENST00000462410		A0A1B0GUL7	405 aa		11.4	□□□□□ -0.58
TRAF5-204	ENST00000462410	TBCA	O75347	108 aa	Known RBP	11.4	□□□□□ -0.58
TRAF5-204	ENST00000462410	SERPINC1	P01008	464 aa		11.4	□□□□□ -0.58
TRAF5-204	ENST00000462410	NPR1	P16066	1061 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms