RNA–Protein interactions for RNA: ENST00000462356.5

LRRC47-202, Transcript of leucine rich repeat containing 47, humanhuman

TSL 2

Gene LRRC47, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-202ENST00000462356 MICALL2Q8IY33 904 aa16.69■□□□□ 0.26
LRRC47-202ENST00000462356 FTSJ3Q8IY81 847 aaKnown RBP16.69■□□□□ 0.26
LRRC47-202ENST00000462356 DZIP1LQ8IYY4 767 aaKnown RBP16.69■□□□□ 0.26
LRRC47-202ENST00000462356 SIL1Q9H173 461 aa16.69■□□□□ 0.26
LRRC47-202ENST00000462356 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
LRRC47-202ENST00000462356 GNAI3P08754 354 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 VIL1P09327 827 aaKnown RBP16.68■□□□□ 0.26
LRRC47-202ENST00000462356 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
LRRC47-202ENST00000462356 METTL24Q5JXM2 366 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 SAMD7Q7Z3H4 446 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 PODNQ7Z5L7 613 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 ITPRIPQ8IWB1 547 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 PANK1Q8TE04 598 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 COA1Q9GZY4 146 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 RCAN3Q9UKA8 241 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 IRS2Q9Y4H2 1338 aa16.68■□□□□ 0.26
LRRC47-202ENST00000462356 USP17L3A6NCW0 530 aa16.67■□□□□ 0.26
LRRC47-202ENST00000462356 USP17L4A6NCW7 530 aa16.67■□□□□ 0.26
LRRC47-202ENST00000462356 EGFRP00533 1210 aa16.67■□□□□ 0.26
LRRC47-202ENST00000462356 HIRAP54198 1017 aaPredicted RBP16.67■□□□□ 0.26
LRRC47-202ENST00000462356 USP17L1Q7RTZ2 530 aa16.67■□□□□ 0.26
LRRC47-202ENST00000462356 C1orf115Q9H7X2 142 aa16.67■□□□□ 0.26
LRRC47-202ENST00000462356 CD209Q9NNX6 404 aa16.67■□□□□ 0.26
LRRC47-202ENST00000462356 ADARB2Q9NS39 739 aaKnown RBP16.67■□□□□ 0.26
LRRC47-202ENST00000462356 JAG2Q9Y219 1238 aa16.67■□□□□ 0.26
LRRC47-202ENST00000462356 MROH5Q6ZUA9 1318 aa16.67■□□□□ 0.26
LRRC47-202ENST00000462356 H7C1D1 291 aa16.66■□□□□ 0.26
LRRC47-202ENST00000462356 GYG1P46976 350 aa16.66■□□□□ 0.26
LRRC47-202ENST00000462356 FMR1Q06787 632 aaKnown RBP eCLIP16.66■□□□□ 0.26
LRRC47-202ENST00000462356 TBC1D10BQ4KMP7 808 aaPredicted RBP16.66■□□□□ 0.26
LRRC47-202ENST00000462356 RSBN1LQ6PCB5 846 aaPredicted RBP16.66■□□□□ 0.26
LRRC47-202ENST00000462356 ADAMTSL1Q8N6G6 1762 aa16.66■□□□□ 0.26
LRRC47-202ENST00000462356 EYA2O00167 538 aa16.65■□□□□ 0.26
LRRC47-202ENST00000462356 GTF2IP78347 998 aa16.65■□□□□ 0.26
LRRC47-202ENST00000462356 UBE4AQ14139 1066 aa16.65■□□□□ 0.26
LRRC47-202ENST00000462356 TTLL5Q6EMB2 1281 aa16.65■□□□□ 0.26
LRRC47-202ENST00000462356 USP50Q70EL3 339 aaPredicted RBP16.65■□□□□ 0.26
LRRC47-202ENST00000462356 ATG9AQ7Z3C6 839 aa16.65■□□□□ 0.26
LRRC47-202ENST00000462356 CNTROBQ8N137 903 aa16.65■□□□□ 0.26
LRRC47-202ENST00000462356 VGLL2Q8N8G2 317 aa16.65■□□□□ 0.26
LRRC47-202ENST00000462356 DPF2Q92785 391 aa16.65■□□□□ 0.26
LRRC47-202ENST00000462356 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
LRRC47-202ENST00000462356 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
LRRC47-202ENST00000462356 GNAI2P04899 355 aa16.64■□□□□ 0.25
LRRC47-202ENST00000462356 APLP1P51693 650 aa16.64■□□□□ 0.25
LRRC47-202ENST00000462356 DACT2Q5SW24 774 aa16.64■□□□□ 0.25
LRRC47-202ENST00000462356 PSME4Q14997 1843 aa16.63■□□□□ 0.25
LRRC47-202ENST00000462356 PNMA6EA0A0J9YXQ4 647 aa16.63■□□□□ 0.25
LRRC47-202ENST00000462356 PDE8BO95263 885 aa16.63■□□□□ 0.25
LRRC47-202ENST00000462356 ITGBL1O95965 494 aaPredicted RBP16.63■□□□□ 0.25
LRRC47-202ENST00000462356 RPS12P25398 132 aaKnown RBP16.63■□□□□ 0.25
LRRC47-202ENST00000462356 C15orf52Q6ZUT6 534 aaKnown RBP16.63■□□□□ 0.25
LRRC47-202ENST00000462356 ZNF804AQ7Z570 1209 aa16.63■□□□□ 0.25
LRRC47-202ENST00000462356 GMLQ99445 158 aa16.63■□□□□ 0.25
LRRC47-202ENST00000462356 IQSEC3Q9UPP2 1182 aaPredicted RBP16.63■□□□□ 0.25
LRRC47-202ENST00000462356 ZNF646O15015 1829 aaPredicted RBP16.62■□□□□ 0.25
LRRC47-202ENST00000462356 TRAF5O00463 557 aa16.62■□□□□ 0.25
LRRC47-202ENST00000462356 ZBTB7BO15156 539 aaPredicted RBP16.62■□□□□ 0.25
LRRC47-202ENST00000462356 DLK2Q6UY11 383 aa16.62■□□□□ 0.25
LRRC47-202ENST00000462356 AGBL3Q8NEM8 1001 aa16.62■□□□□ 0.25
LRRC47-202ENST00000462356 FAM84BQ96KN1 310 aaPredicted RBP16.62■□□□□ 0.25
LRRC47-202ENST00000462356 ASTN2O75129 1339 aaPredicted RBP16.62■□□□□ 0.25
LRRC47-202ENST00000462356 IL1R1P14778 569 aa16.61■□□□□ 0.25
LRRC47-202ENST00000462356 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
LRRC47-202ENST00000462356 KIF4BQ2VIQ3 1234 aa16.61■□□□□ 0.25
LRRC47-202ENST00000462356 STRIP1Q5VSL9 837 aa16.61■□□□□ 0.25
LRRC47-202ENST00000462356 KIAA0825Q8IV33 1275 aa16.61■□□□□ 0.25
LRRC47-202ENST00000462356 COG6Q9Y2V7 657 aa16.61■□□□□ 0.25
LRRC47-202ENST00000462356 PASKQ96RG2 1323 aa16.61■□□□□ 0.25
LRRC47-202ENST00000462356 F8W031 263 aaPredicted RBP16.6■□□□□ 0.25
LRRC47-202ENST00000462356 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
LRRC47-202ENST00000462356 BCAMP50895 628 aa16.6■□□□□ 0.25
LRRC47-202ENST00000462356 C20orf194Q5TEA3 1177 aa16.6■□□□□ 0.25
LRRC47-202ENST00000462356 CERS5Q8N5B7 392 aa16.6■□□□□ 0.25
LRRC47-202ENST00000462356 GLIS2Q9BZE0 524 aaPredicted RBP16.6■□□□□ 0.25
LRRC47-202ENST00000462356 COPRSQ9NQ92 184 aa16.6■□□□□ 0.25
LRRC47-202ENST00000462356 CIAO1O76071 339 aa16.59■□□□□ 0.25
LRRC47-202ENST00000462356 FGFR2P21802 821 aa16.59■□□□□ 0.25
LRRC47-202ENST00000462356 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
LRRC47-202ENST00000462356 MTX1Q13505 466 aa16.59■□□□□ 0.25
LRRC47-202ENST00000462356 PUM3Q15397 648 aaKnown RBP16.59■□□□□ 0.25
LRRC47-202ENST00000462356 FBXO33Q7Z6M2 555 aa16.59■□□□□ 0.25
LRRC47-202ENST00000462356 VPS37DQ86XT2 251 aa16.59■□□□□ 0.25
LRRC47-202ENST00000462356 TDRD7Q8NHU6 1098 aaKnown RBP16.59■□□□□ 0.25
LRRC47-202ENST00000462356 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
LRRC47-202ENST00000462356 SCAF8Q9UPN6 1271 aaKnown RBP16.59■□□□□ 0.25
LRRC47-202ENST00000462356 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.59■□□□□ 0.25
LRRC47-202ENST00000462356 IFIT1P09914 478 aaKnown RBP16.58■□□□□ 0.24
LRRC47-202ENST00000462356 IL15P40933 162 aaPredicted RBP16.58■□□□□ 0.24
LRRC47-202ENST00000462356 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
LRRC47-202ENST00000462356 SCARF1Q14162 830 aa16.58■□□□□ 0.24
LRRC47-202ENST00000462356 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
LRRC47-202ENST00000462356 MYOZ2Q9NPC6 264 aa16.58■□□□□ 0.24
LRRC47-202ENST00000462356 PGAP2Q9UHJ9 254 aa16.58■□□□□ 0.24
LRRC47-202ENST00000462356 SLC5A1P13866 664 aa16.57■□□□□ 0.24
LRRC47-202ENST00000462356 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
LRRC47-202ENST00000462356 TFCP2Q12800 502 aa16.57■□□□□ 0.24
LRRC47-202ENST00000462356 MVPQ14764 893 aaKnown RBP16.57■□□□□ 0.24
LRRC47-202ENST00000462356 ATP2B3Q16720 1220 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms