RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	CNOT7	Q9UIV1	285 aa	Known RBP	10.48	□□□□□ -0.73
ITSN1-222	ENST00000462212	SHTN1	A0MZ66	631 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212		G3V3G9	751 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	HIRA	P54198	1017 aa	Predicted RBP	10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	DCAF8	Q5TAQ9	597 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	ZKSCAN2	Q63HK3	967 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	MICALL2	Q8IY33	904 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	DNAJC5G	Q8N7S2	189 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	AGBL3	Q8NEM8	1001 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	HELB	Q8NG08	1087 aa	Predicted RBP	10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	FRAT1	Q92837	279 aa	Predicted RBP	10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	PGAP2	Q9UHJ9	254 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	HDAC5	Q9UQL6	1122 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	TNN	Q9UQP3	1299 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	CLEC11A	Q9Y240	323 aa		10.47	□□□□□ -0.73
ITSN1-222	ENST00000462212	USP17L3	A6NCW0	530 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	USP17L4	A6NCW7	530 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212		H7C1D1	291 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	GNAI3	P08754	354 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	KCNJ4	P48050	445 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	ZNF280A	P59817	542 aa	Predicted RBP	10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	PTPN12	Q05209	780 aa	Known RBP	10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	UBE4A	Q14139	1066 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	LRRC24	Q50LG9	513 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	DACT2	Q5SW24	774 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	STRIP1	Q5VSL9	837 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	MAP1S	Q66K74	1059 aa	Predicted RBP	10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	USP17L1	Q7RTZ2	530 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	CNTROB	Q8N137	903 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	VGLL2	Q8N8G2	317 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	KLHDC4	Q8TBB5	520 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	TRPM4	Q8TD43	1214 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	ZC3H15	Q8WU90	426 aa	Known RBP	10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	LRRFIP2	Q9Y608	721 aa	Known RBP	10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	MROH5	Q6ZUA9	1318 aa		10.46	□□□□□ -0.73
ITSN1-222	ENST00000462212	IL1R1	P14778	569 aa		10.45	□□□□□ -0.74
ITSN1-222	ENST00000462212	HTRA3	P83110	453 aa		10.45	□□□□□ -0.74
ITSN1-222	ENST00000462212	MTX1	Q13505	466 aa		10.45	□□□□□ -0.74
ITSN1-222	ENST00000462212	TMEM57	Q8N5G2	664 aa		10.45	□□□□□ -0.74
ITSN1-222	ENST00000462212	CLUAP1	Q96AJ1	413 aa		10.45	□□□□□ -0.74
ITSN1-222	ENST00000462212	CD209	Q9NNX6	404 aa		10.45	□□□□□ -0.74
ITSN1-222	ENST00000462212	FBXO3	Q9UK99	471 aa		10.45	□□□□□ -0.74
ITSN1-222	ENST00000462212	MYO3B	Q8WXR4	1341 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	EYA2	O00167	538 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	PLIN1	O60240	522 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	PDE8B	O95263	885 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	EGFR	P00533	1210 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	ATG9A	Q7Z3C6	839 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	SAMD7	Q7Z3H4	446 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	ZNF804A	Q7Z570	1209 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	COPRS	Q9NQ92	184 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	CREBZF	Q9NS37	354 aa		10.44	□□□□□ -0.74
ITSN1-222	ENST00000462212	CIAO1	O76071	339 aa		10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	USP17L8	P0C7I0	530 aa		10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	RLBP1	P12271	317 aa		10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	MMP14	P50281	582 aa		10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	METTL24	Q5JXM2	366 aa		10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	TTLL5	Q6EMB2	1281 aa		10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	DZIP1L	Q8IYY4	767 aa	Known RBP	10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	KLRG1	Q96E93	195 aa		10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	FAM84B	Q96KN1	310 aa	Predicted RBP	10.43	□□□□□ -0.74
ITSN1-222	ENST00000462212	TMEM88B	A6NKF7	163 aa		10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	SASH1	O94885	1247 aa		10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	GNAI2	P04899	355 aa		10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	FGFR2	P21802	821 aa		10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	FKBP1A	P62942	108 aa	Known RBP	10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	GTF2I	P78347	998 aa		10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	KIF4B	Q2VIQ3	1234 aa		10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	FBXO33	Q7Z6M2	555 aa		10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	TDRD7	Q8NHU6	1098 aa	Known RBP	10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	MXD3	Q9BW11	206 aa		10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	POLR2A	P24928	1970 aa	Known RBP	10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	TRPM7	Q96QT4	1865 aa		10.42	□□□□□ -0.74
ITSN1-222	ENST00000462212	FAM205A	Q6ZU69	1335 aa		10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	TRAF5	O00463	557 aa		10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	HIBADH	P31937	336 aa	Known RBP	10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	GYG1	P46976	350 aa		10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	PUM3	Q15397	648 aa	Known RBP	10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	CDC37L1	Q7L3B6	337 aa		10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	FTSJ3	Q8IY81	847 aa	Known RBP	10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	CERS5	Q8N5B7	392 aa		10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	JMY	Q8N9B5	988 aa		10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	MYOZ2	Q9NPC6	264 aa		10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	PA2G4	Q9UQ80	394 aa	Known RBP	10.41	□□□□□ -0.74
ITSN1-222	ENST00000462212	ZBTB7B	O15156	539 aa	Predicted RBP	10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	SRGAP3	O43295	1099 aa		10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	IL15	P40933	162 aa	Predicted RBP	10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	FMR1	Q06787	632 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	RBM26	Q5T8P6	1007 aa	Known RBP	10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	CST9	Q5W186	159 aa		10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	OGFOD1	Q8N543	542 aa		10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	LPIN2	Q92539	896 aa		10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	FBXW7	Q969H0	707 aa		10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	ZBED3	Q96IU2	234 aa	Predicted RBP	10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	SIL1	Q9H173	461 aa		10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	RCAN3	Q9UKA8	241 aa		10.4	□□□□□ -0.74
ITSN1-222	ENST00000462212	CNTNAP1	P78357	1384 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms