RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 GBP3Q9H0R5 595 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 ODF2LQ9ULJ1 636 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 PREX2Q70Z35 1606 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 ARAP3Q8WWN8 1544 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 BECN2A8MW95 431 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 MCM6Q14566 821 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 CEP112Q8N8E3 955 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 KCNB2Q92953 911 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 SYTL4Q96C24 671 aaPredicted RBP10.62□□□□□ -0.71
LINC01140-201ENST00000461990 CLIC6Q96NY7 704 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 ANO10Q9NW15 660 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 AOX1Q06278 1338 aa10.62□□□□□ -0.71
LINC01140-201ENST00000461990 GOLGA6L4A6NEF3 574 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 SF3B2Q13435 895 aaKnown RBP10.61□□□□□ -0.71
LINC01140-201ENST00000461990 SPATS2Q86XZ4 545 aaKnown RBP10.61□□□□□ -0.71
LINC01140-201ENST00000461990 SPATA32Q96LK8 384 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 SPATS2LQ9NUQ6 558 aaKnown RBP10.61□□□□□ -0.71
LINC01140-201ENST00000461990 HYPKQ9NX55 129 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 SNX14Q9Y5W7 946 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 RPGRIP1LQ68CZ1 1315 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 CCNHP51946 323 aaPredicted RBP10.61□□□□□ -0.71
LINC01140-201ENST00000461990 GNL2Q13823 731 aaKnown RBP10.61□□□□□ -0.71
LINC01140-201ENST00000461990 CASP8Q14790 479 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 IQCA1Q86XH1 822 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 SLC24A3Q9HC58 644 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 RPS6KL1Q9Y6S9 549 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 NEO1Q92859 1461 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 A0A1B0GUA9 196 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 PDCP20941 246 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 SLC8A3P57103 927 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 TUBB2AQ13885 445 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 SRGAP1Q7Z6B7 1085 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 PGBD1Q96JS3 809 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 TUBB2BQ9BVA1 445 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 NAT10Q9H0A0 1025 aaKnown RBP10.61□□□□□ -0.71
LINC01140-201ENST00000461990 STAP2Q9UGK3 403 aa10.61□□□□□ -0.71
LINC01140-201ENST00000461990 MYBL2P10244 700 aa10.6□□□□□ -0.71
LINC01140-201ENST00000461990 PLCB4Q15147 1175 aa10.6□□□□□ -0.71
LINC01140-201ENST00000461990 TLDC1Q6P9B6 456 aa10.6□□□□□ -0.71
LINC01140-201ENST00000461990 PAIP2Q9BPZ3 127 aaKnown RBP10.6□□□□□ -0.71
LINC01140-201ENST00000461990 SLC5A9Q2M3M2 681 aa10.6□□□□□ -0.71
LINC01140-201ENST00000461990 YTHDF3Q7Z739 585 aaKnown RBP10.6□□□□□ -0.71
LINC01140-201ENST00000461990 CEP57L1Q8IYX8 460 aa10.6□□□□□ -0.71
LINC01140-201ENST00000461990 PAGR1Q9BTK6 254 aa10.6□□□□□ -0.71
LINC01140-201ENST00000461990 PLEKHA4Q9H4M7 779 aa10.6□□□□□ -0.71
LINC01140-201ENST00000461990 LRRC7Q96NW7 1537 aa10.6□□□□□ -0.71
LINC01140-201ENST00000461990 CDHR2Q9BYE9 1310 aa10.6□□□□□ -0.71
LINC01140-201ENST00000461990 ST3GAL1Q11201 340 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 OS9Q13438 667 aaPredicted RBP10.59□□□□□ -0.71
LINC01140-201ENST00000461990 WWC2Q6AWC2 1192 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 RCSD1Q6JBY9 416 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 ABCB6Q9NP58 842 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 RNF40O75150 1001 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 LARGE1O95461 756 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 SYF2O95926 243 aaKnown RBP10.59□□□□□ -0.71
LINC01140-201ENST00000461990 CHMP4BP1P59074 171 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 MAB21L3Q8N8X9 362 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 CHMP3Q9Y3E7 222 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 VPS37CA5D8V6 355 aaPredicted RBP10.59□□□□□ -0.71
LINC01140-201ENST00000461990 CUTAO60888 179 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 CHGAP10645 457 aaKnown RBP10.59□□□□□ -0.71
LINC01140-201ENST00000461990 MTA1Q13330 715 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 PDCD2Q16342 344 aaPredicted RBP10.59□□□□□ -0.71
LINC01140-201ENST00000461990 TMC6Q7Z403 805 aa10.59□□□□□ -0.71
LINC01140-201ENST00000461990 PUS7Q96PZ0 661 aaKnown RBP10.59□□□□□ -0.71
LINC01140-201ENST00000461990 XPO4Q9C0E2 1151 aaKnown RBP10.59□□□□□ -0.71
LINC01140-201ENST00000461990 KIF4BQ2VIQ3 1234 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 CDCA2Q69YH5 1023 aaPredicted RBP10.58□□□□□ -0.72
LINC01140-201ENST00000461990 PNKPQ96T60 521 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 TM6SF1Q9BZW5 370 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 HOMER3Q9NSC5 361 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 HMMRO75330 724 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 SNUPNO95149 360 aaKnown RBP10.58□□□□□ -0.72
LINC01140-201ENST00000461990 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
LINC01140-201ENST00000461990 CCT5P48643 541 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 SMTNP53814 917 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 CDC37L1Q7L3B6 337 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 CCDC83Q8IWF9 413 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 WDR24Q96S15 920 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 CD248Q9HCU0 757 aa10.58□□□□□ -0.72
LINC01140-201ENST00000461990 ZBTB12Q9Y330 459 aaPredicted RBP10.58□□□□□ -0.72
LINC01140-201ENST00000461990 CPSF1Q10570 1443 aaKnown RBP10.57□□□□□ -0.72
LINC01140-201ENST00000461990 ARHGAP6O43182 974 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 RASSF9O75901 435 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 RPS6KA3P51812 740 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 RBBP5Q15291 538 aaKnown RBP10.57□□□□□ -0.72
LINC01140-201ENST00000461990 WDR93Q6P2C0 686 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 ANKRD23Q86SG2 305 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 ATP6V0A4Q9HBG4 840 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 PPP2R2CQ9Y2T4 447 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 CAPN7Q9Y6W3 813 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 PNPLA6Q8IY17 1366 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 PRPHP41219 470 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 LARP1BQ659C4 914 aaKnown RBP10.57□□□□□ -0.72
LINC01140-201ENST00000461990 TMEM139Q8IV31 216 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 PIAS4Q8N2W9 510 aaPredicted RBP10.57□□□□□ -0.72
LINC01140-201ENST00000461990 AOPEPQ8N6M6 819 aa10.57□□□□□ -0.72
LINC01140-201ENST00000461990 MICAL1Q8TDZ2 1067 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms