RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
LDB1-203ENST00000461873 MED23Q9ULK4 1368 aa11.18□□□□□ -0.62
LDB1-203ENST00000461873 PLIN1O60240 522 aa11.18□□□□□ -0.62
LDB1-203ENST00000461873 BEND3Q5T5X7 828 aa11.18□□□□□ -0.62
LDB1-203ENST00000461873 KCNQ5Q9NR82 932 aa11.18□□□□□ -0.62
LDB1-203ENST00000461873 TLL2Q9Y6L7 1015 aa11.18□□□□□ -0.62
LDB1-203ENST00000461873 DUOX1Q9NRD9 1551 aa11.18□□□□□ -0.62
LDB1-203ENST00000461873 PTPRCP08575 1304 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 CSF1RP07333 972 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 NF2P35240 595 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 MMP14P50281 582 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 CHRNDQ07001 517 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 COL13A1Q5TAT6 717 aaPredicted RBP11.17□□□□□ -0.62
LDB1-203ENST00000461873 TTLL5Q6EMB2 1281 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 CYP4F22Q6NT55 531 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 LDHAL6AQ6ZMR3 332 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 ZNF804AQ7Z570 1209 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 MYOZ2Q9NPC6 264 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
LDB1-203ENST00000461873 PGAP2Q9UHJ9 254 aa11.17□□□□□ -0.62
LDB1-203ENST00000461873 CAPN15O75808 1086 aa11.16□□□□□ -0.62
LDB1-203ENST00000461873 MAP2K2P36507 400 aa11.16□□□□□ -0.62
LDB1-203ENST00000461873 HIRAP54198 1017 aaPredicted RBP11.16□□□□□ -0.62
LDB1-203ENST00000461873 HUNKP57058 714 aa11.16□□□□□ -0.62
LDB1-203ENST00000461873 SCARF1Q14162 830 aa11.16□□□□□ -0.62
LDB1-203ENST00000461873 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
LDB1-203ENST00000461873 STRIP1Q5VSL9 837 aa11.16□□□□□ -0.62
LDB1-203ENST00000461873 CST9Q5W186 159 aa11.16□□□□□ -0.62
LDB1-203ENST00000461873 VPS37DQ86XT2 251 aa11.16□□□□□ -0.62
LDB1-203ENST00000461873 GGA3Q9NZ52 723 aa11.16□□□□□ -0.62
LDB1-203ENST00000461873 HDAC5Q9UQL6 1122 aa11.16□□□□□ -0.62
LDB1-203ENST00000461873 SHTN1A0MZ66 631 aa11.15□□□□□ -0.62
LDB1-203ENST00000461873 CCER2I3L3R5 266 aa11.15□□□□□ -0.62
LDB1-203ENST00000461873 MYO1BO43795 1136 aa11.15□□□□□ -0.62
LDB1-203ENST00000461873 FRAT2O75474 233 aaPredicted RBP11.15□□□□□ -0.62
LDB1-203ENST00000461873 FMR1Q06787 632 aaKnown RBP eCLIP11.15□□□□□ -0.62
LDB1-203ENST00000461873 ANGEL2Q5VTE6 544 aaKnown RBP11.15□□□□□ -0.62
LDB1-203ENST00000461873 SAPCD2Q86UD0 394 aa11.15□□□□□ -0.62
LDB1-203ENST00000461873 HHIPL1Q96JK4 782 aa11.15□□□□□ -0.62
LDB1-203ENST00000461873 GBA2Q9HCG7 927 aaPredicted RBP11.15□□□□□ -0.62
LDB1-203ENST00000461873 SMC4Q9NTJ3 1288 aa11.15□□□□□ -0.62
LDB1-203ENST00000461873 POLR2AP24928 1970 aaKnown RBP11.14□□□□□ -0.63
LDB1-203ENST00000461873 FOXN1O15353 648 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 CA12O43570 354 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 TAF5LO75529 589 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 ZNF157P51786 506 aaPredicted RBP11.14□□□□□ -0.63
LDB1-203ENST00000461873 CASP7P55210 303 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 GTF2IP78347 998 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 NOGQ13253 232 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 HELBQ8NG08 1087 aaPredicted RBP11.14□□□□□ -0.63
LDB1-203ENST00000461873 CCDC102AQ96A19 550 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 RNF39Q9H2S5 420 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 WBP1LQ9NX94 342 aa11.14□□□□□ -0.63
LDB1-203ENST00000461873 ADM5C9JUS6 153 aa11.13□□□□□ -0.63
LDB1-203ENST00000461873 RBM5P52756 815 aaKnown RBP eCLIP11.13□□□□□ -0.63
LDB1-203ENST00000461873 LBX1P52954 281 aa11.13□□□□□ -0.63
LDB1-203ENST00000461873 ZNF280AP59817 542 aaPredicted RBP11.13□□□□□ -0.63
LDB1-203ENST00000461873 FOXO4P98177 505 aa11.13□□□□□ -0.63
LDB1-203ENST00000461873 SLFN5Q08AF3 891 aa11.13□□□□□ -0.63
LDB1-203ENST00000461873 ALDH1L2Q3SY69 923 aa11.13□□□□□ -0.63
LDB1-203ENST00000461873 RGMBQ6NW40 437 aa11.13□□□□□ -0.63
LDB1-203ENST00000461873 KIAA0825Q8IV33 1275 aa11.13□□□□□ -0.63
LDB1-203ENST00000461873 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
LDB1-203ENST00000461873 CT47B1P0C2W7 299 aaPredicted RBP11.12□□□□□ -0.63
LDB1-203ENST00000461873 DLGAP5Q15398 846 aa11.12□□□□□ -0.63
LDB1-203ENST00000461873 CAVIN4Q5BKX8 364 aa11.12□□□□□ -0.63
LDB1-203ENST00000461873 APOBEC3FQ8IUX4 373 aaKnown RBP11.12□□□□□ -0.63
LDB1-203ENST00000461873 MIER1Q8N108 512 aa11.12□□□□□ -0.63
LDB1-203ENST00000461873 CDCA5Q96FF9 252 aa11.12□□□□□ -0.63
LDB1-203ENST00000461873 ZNF594Q96JF6 807 aaPredicted RBP11.12□□□□□ -0.63
LDB1-203ENST00000461873 CD209Q9NNX6 404 aa11.12□□□□□ -0.63
LDB1-203ENST00000461873 SCN9AQ15858 1988 aa11.12□□□□□ -0.63
LDB1-203ENST00000461873 MROH5Q6ZUA9 1318 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 COL4A1P02462 1669 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 F8W031 263 aaPredicted RBP11.11□□□□□ -0.63
LDB1-203ENST00000461873 AOC2O75106 756 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 EGFRP00533 1210 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
LDB1-203ENST00000461873 FKBP1BP68106 108 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 METTL24Q5JXM2 366 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 DACT2Q5SW24 774 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 SSH1Q8WYL5 1049 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 API5Q9BZZ5 524 aaKnown RBP11.11□□□□□ -0.63
LDB1-203ENST00000461873 PSME4Q14997 1843 aa11.11□□□□□ -0.63
LDB1-203ENST00000461873 ZNF521Q96K83 1311 aa11.1□□□□□ -0.63
LDB1-203ENST00000461873 NBPF7P0C2Y1 421 aaPredicted RBP11.1□□□□□ -0.63
LDB1-203ENST00000461873 UBTFL1P0CB47 393 aaPredicted RBP11.1□□□□□ -0.63
LDB1-203ENST00000461873 HIBADHP31937 336 aaKnown RBP11.1□□□□□ -0.63
LDB1-203ENST00000461873 UBE4AQ14139 1066 aa11.1□□□□□ -0.63
LDB1-203ENST00000461873 ARMC9Q7Z3E5 817 aa11.1□□□□□ -0.63
LDB1-203ENST00000461873 TXNRD3Q86VQ6 643 aa11.1□□□□□ -0.63
LDB1-203ENST00000461873 REM2Q8IYK8 340 aaPredicted RBP11.1□□□□□ -0.63
LDB1-203ENST00000461873 SUCLG2Q96I99 432 aa11.1□□□□□ -0.63
LDB1-203ENST00000461873 ZNF609O15014 1411 aa11.09□□□□□ -0.63
LDB1-203ENST00000461873 WTIPA6NIX2 430 aaPredicted RBP11.09□□□□□ -0.63
LDB1-203ENST00000461873 IPO8O15397 1037 aaKnown RBP11.09□□□□□ -0.63
LDB1-203ENST00000461873 SASH1O94885 1247 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms