RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 ZC3H15Q8WU90 426 aaKnown RBP29.82■■■□□ 2.36
LMBR1-214ENST00000461469 ANKRD2Q9GZV1 360 aa29.82■■■□□ 2.36
LMBR1-214ENST00000461469 DIEXFQ68CQ4 756 aaKnown RBP29.81■■■□□ 2.36
LMBR1-214ENST00000461469 SMC4Q9NTJ3 1288 aa29.81■■■□□ 2.36
LMBR1-214ENST00000461469 USP17L3A6NCW0 530 aa29.8■■■□□ 2.36
LMBR1-214ENST00000461469 USP17L4A6NCW7 530 aa29.8■■■□□ 2.36
LMBR1-214ENST00000461469 RASSF10A6NK89 507 aa29.8■■■□□ 2.36
LMBR1-214ENST00000461469 USP17L1Q7RTZ2 530 aa29.8■■■□□ 2.36
LMBR1-214ENST00000461469 HSPA1AP0DMV8 641 aaKnown RBP29.79■■■□□ 2.36
LMBR1-214ENST00000461469 HSPA1BP0DMV9 641 aaKnown RBP29.79■■■□□ 2.36
LMBR1-214ENST00000461469 KIF4BQ2VIQ3 1234 aa29.79■■■□□ 2.36
LMBR1-214ENST00000461469 ANKRD44Q8N8A2 993 aa29.79■■■□□ 2.36
LMBR1-214ENST00000461469 BICC1Q9H694 974 aaKnown RBP29.79■■■□□ 2.36
LMBR1-214ENST00000461469 ZNF280AP59817 542 aaPredicted RBP29.78■■■□□ 2.36
LMBR1-214ENST00000461469 CCDC57Q2TAC2 916 aa29.78■■■□□ 2.36
LMBR1-214ENST00000461469 DACT2Q5SW24 774 aa29.78■■■□□ 2.36
LMBR1-214ENST00000461469 AGBL3Q8NEM8 1001 aa29.78■■■□□ 2.36
LMBR1-214ENST00000461469 PUS3Q9BZE2 481 aaKnown RBP29.78■■■□□ 2.36
LMBR1-214ENST00000461469 COA1Q9GZY4 146 aa29.78■■■□□ 2.36
LMBR1-214ENST00000461469 USP44Q9H0E7 712 aa29.78■■■□□ 2.36
LMBR1-214ENST00000461469 ABT1Q9ULW3 272 aaKnown RBP29.78■■■□□ 2.36
LMBR1-214ENST00000461469 USP48Q86UV5 1035 aa29.77■■■□□ 2.36
LMBR1-214ENST00000461469 DEFB115Q30KQ5 88 aa29.76■■■□□ 2.35
LMBR1-214ENST00000461469 RABL6Q3YEC7 729 aaPredicted RBP29.76■■■□□ 2.35
LMBR1-214ENST00000461469 CELF2O95319 508 aaKnown RBP29.75■■■□□ 2.35
LMBR1-214ENST00000461469 LDHAL6AQ6ZMR3 332 aa29.75■■■□□ 2.35
LMBR1-214ENST00000461469 CDC37L1Q7L3B6 337 aa29.75■■■□□ 2.35
LMBR1-214ENST00000461469 NOB1Q9ULX3 412 aaKnown RBP29.75■■■□□ 2.35
LMBR1-214ENST00000461469 ADM5C9JUS6 153 aa29.74■■■□□ 2.35
LMBR1-214ENST00000461469 CT47B1P0C2W7 299 aaPredicted RBP29.74■■■□□ 2.35
LMBR1-214ENST00000461469 KCNJ4P48050 445 aa29.74■■■□□ 2.35
LMBR1-214ENST00000461469 PLIN1O60240 522 aa29.73■■■□□ 2.35
LMBR1-214ENST00000461469 RARSP54136 660 aaKnown RBP29.73■■■□□ 2.35
LMBR1-214ENST00000461469 TAF7LQ5H9L4 462 aa29.73■■■□□ 2.35
LMBR1-214ENST00000461469 FBXW7Q969H0 707 aa29.73■■■□□ 2.35
LMBR1-214ENST00000461469 ZNF408Q9H9D4 720 aa29.73■■■□□ 2.35
LMBR1-214ENST00000461469 TLL2Q9Y6L7 1015 aa29.73■■■□□ 2.35
LMBR1-214ENST00000461469 USP17L8P0C7I0 530 aa29.72■■■□□ 2.35
LMBR1-214ENST00000461469 STRIP1Q5VSL9 837 aa29.72■■■□□ 2.35
LMBR1-214ENST00000461469 C15orf52Q6ZUT6 534 aaKnown RBP29.72■■■□□ 2.35
LMBR1-214ENST00000461469 CD209Q9NNX6 404 aa29.72■■■□□ 2.35
LMBR1-214ENST00000461469 CNNM1Q9NRU3 951 aa29.72■■■□□ 2.35
LMBR1-214ENST00000461469 GGA3Q9NZ52 723 aa29.72■■■□□ 2.35
LMBR1-214ENST00000461469 THSD7BQ9C0I4 1608 aa29.71■■■□□ 2.35
LMBR1-214ENST00000461469 KRT26Q7Z3Y9 468 aa29.71■■■□□ 2.35
LMBR1-214ENST00000461469 MYOZ2Q9NPC6 264 aa29.71■■■□□ 2.35
LMBR1-214ENST00000461469 BRPF1P55201 1214 aaPredicted RBP29.7■■■□□ 2.35
LMBR1-214ENST00000461469 SCARF1Q14162 830 aa29.7■■■□□ 2.35
LMBR1-214ENST00000461469 RIPOR2Q9Y4F9 1068 aa29.7■■■□□ 2.35
LMBR1-214ENST00000461469 WDR33Q9C0J8 1336 aaKnown RBP29.7■■■□□ 2.34
LMBR1-214ENST00000461469 GTF2IP78347 998 aa29.69■■■□□ 2.34
LMBR1-214ENST00000461469 LRRC24Q50LG9 513 aa29.69■■■□□ 2.34
LMBR1-214ENST00000461469 COL13A1Q5TAT6 717 aaPredicted RBP29.69■■■□□ 2.34
LMBR1-214ENST00000461469 TTLL5Q6EMB2 1281 aa29.69■■■□□ 2.34
LMBR1-214ENST00000461469 CYP4F22Q6NT55 531 aa29.69■■■□□ 2.34
LMBR1-214ENST00000461469 SAPCD2Q86UD0 394 aa29.69■■■□□ 2.34
LMBR1-214ENST00000461469 KLHDC4Q8TBB5 520 aa29.69■■■□□ 2.34
LMBR1-214ENST00000461469 SCAF8Q9UPN6 1271 aaKnown RBP29.69■■■□□ 2.34
LMBR1-214ENST00000461469 ANGEL2Q5VTE6 544 aaKnown RBP29.68■■■□□ 2.34
LMBR1-214ENST00000461469 DCPSQ96C86 337 aaKnown RBP29.68■■■□□ 2.34
LMBR1-214ENST00000461469 CERS5Q8N5B7 392 aa29.67■■■□□ 2.34
LMBR1-214ENST00000461469 CAPNS2Q96L46 248 aa29.67■■■□□ 2.34
LMBR1-214ENST00000461469 NBPF9Q3BBW0 867 aa29.66■■■□□ 2.34
LMBR1-214ENST00000461469 IL1R1P14778 569 aa29.65■■■□□ 2.34
LMBR1-214ENST00000461469 TNNQ9UQP3 1299 aa29.65■■■□□ 2.34
LMBR1-214ENST00000461469 JAG2Q9Y219 1238 aa29.65■■■□□ 2.34
LMBR1-214ENST00000461469 FOXN1O15353 648 aa29.64■■■□□ 2.34
LMBR1-214ENST00000461469 RFX5P48382 616 aaPredicted RBP29.64■■■□□ 2.34
LMBR1-214ENST00000461469 GRM1Q13255 1194 aa29.64■■■□□ 2.34
LMBR1-214ENST00000461469 PAXIP1Q6ZW49 1069 aaPredicted RBP29.64■■■□□ 2.34
LMBR1-214ENST00000461469 KIAA0825Q8IV33 1275 aa29.64■■■□□ 2.34
LMBR1-214ENST00000461469 MYO3BQ8WXR4 1341 aa29.64■■■□□ 2.34
LMBR1-214ENST00000461469 HNRNPUQ00839 825 aaKnown RBP eCLIP29.63■■■□□ 2.33
LMBR1-214ENST00000461469 GYG1P46976 350 aa29.62■■■□□ 2.33
LMBR1-214ENST00000461469 ZNF804AQ7Z570 1209 aa29.62■■■□□ 2.33
LMBR1-214ENST00000461469 VGLL2Q8N8G2 317 aa29.62■■■□□ 2.33
LMBR1-214ENST00000461469 API5Q9BZZ5 524 aaKnown RBP29.62■■■□□ 2.33
LMBR1-214ENST00000461469 WBP1LQ9NX94 342 aa29.62■■■□□ 2.33
LMBR1-214ENST00000461469 WNT10BO00744 389 aa29.61■■■□□ 2.33
LMBR1-214ENST00000461469 AOC2O75106 756 aa29.61■■■□□ 2.33
LMBR1-214ENST00000461469 BCAR3O75815 825 aa29.61■■■□□ 2.33
LMBR1-214ENST00000461469 SASH1O94885 1247 aa29.61■■■□□ 2.33
LMBR1-214ENST00000461469 UBE4AQ14139 1066 aa29.61■■■□□ 2.33
LMBR1-214ENST00000461469 SULF1Q8IWU6 871 aa29.61■■■□□ 2.33
LMBR1-214ENST00000461469 CDCA5Q96FF9 252 aa29.61■■■□□ 2.33
LMBR1-214ENST00000461469 FAM84BQ96KN1 310 aaPredicted RBP29.6■■■□□ 2.33
LMBR1-214ENST00000461469 PCDHAC2Q9Y5I4 1007 aa29.6■■■□□ 2.33
LMBR1-214ENST00000461469 MROH5Q6ZUA9 1318 aa29.6■■■□□ 2.33
LMBR1-214ENST00000461469 ZBED3Q96IU2 234 aaPredicted RBP29.59■■■□□ 2.33
LMBR1-214ENST00000461469 MEIS3Q99687 375 aa29.59■■■□□ 2.33
LMBR1-214ENST00000461469 IFFO2Q5TF58 517 aa29.58■■■□□ 2.33
LMBR1-214ENST00000461469 OGFOD1Q8N543 542 aa29.58■■■□□ 2.33
LMBR1-214ENST00000461469 TDRD7Q8NHU6 1098 aaKnown RBP29.58■■■□□ 2.33
LMBR1-214ENST00000461469 HHIPL1Q96JK4 782 aa29.58■■■□□ 2.33
LMBR1-214ENST00000461469 PITPNM2Q9BZ72 1349 aa29.58■■■□□ 2.33
LMBR1-214ENST00000461469 GBA2Q9HCG7 927 aaPredicted RBP29.58■■■□□ 2.33
LMBR1-214ENST00000461469 KIF16BQ96L93 1317 aa29.57■■■□□ 2.32
LMBR1-214ENST00000461469 UBTFL1P0CB47 393 aaPredicted RBP29.57■■■□□ 2.32
LMBR1-214ENST00000461469 ECE1P42892 770 aa29.57■■■□□ 2.32
LMBR1-214ENST00000461469 PTPN12Q05209 780 aaKnown RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms