RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 FLIIQ13045 1269 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 GBP6Q6ZN66 633 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 HEATR3Q7Z4Q2 680 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 LMNTD2Q8IXW0 634 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 TCHPQ9BT92 498 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 VPS18Q9P253 973 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 CALML3P27482 149 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 KRT79Q5XKE5 535 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 AOPEPQ8N6M6 819 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 CPSF2Q9P2I0 782 aaKnown RBP10.16□□□□□ -0.78
BRCA1-205ENST00000461221 LRPPRCP42704 1394 aaKnown RBP10.16□□□□□ -0.78
BRCA1-205ENST00000461221 CCDC186Q7Z3E2 898 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 CCDC26Q8TAB7 109 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 STX8Q9UNK0 236 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 MAP3K2Q9Y2U5 619 aa10.16□□□□□ -0.78
BRCA1-205ENST00000461221 NAPAP54920 295 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 MAP7Q14244 749 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 CCDC152Q4G0S7 254 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 NAP1L4Q99733 375 aaKnown RBP10.15□□□□□ -0.78
BRCA1-205ENST00000461221 PFDN4Q9NQP4 134 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 FAM114A2Q9NRY5 505 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 RUSC2Q8N2Y8 1516 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 RTL1A6NKG5 1358 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 F6X3S4 739 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 SETSIPP0DME0 302 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 NEDD9Q14511 834 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 MPRIPQ6WCQ1 1025 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 PPP1R9BQ96SB3 815 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.15□□□□□ -0.78
BRCA1-205ENST00000461221 USH1CQ9Y6N9 552 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 IGF1RP08069 1367 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 A0A1B0GUA9 196 aa10.15□□□□□ -0.78
BRCA1-205ENST00000461221 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.15□□□□□ -0.78
BRCA1-205ENST00000461221 LARP6Q9BRS8 491 aaKnown RBP10.15□□□□□ -0.78
BRCA1-205ENST00000461221 THUMPD2Q9BTF0 503 aaKnown RBP10.15□□□□□ -0.78
BRCA1-205ENST00000461221 CAMSAP2Q08AD1 1489 aa10.15□□□□□ -0.79
BRCA1-205ENST00000461221 B4GALNT4Q76KP1 1039 aa10.15□□□□□ -0.79
BRCA1-205ENST00000461221 HDXQ7Z353 690 aa10.15□□□□□ -0.79
BRCA1-205ENST00000461221 BRF1Q92994 677 aa10.15□□□□□ -0.79
BRCA1-205ENST00000461221 ATAD2BQ9ULI0 1458 aa10.15□□□□□ -0.79
BRCA1-205ENST00000461221 ZEB2O60315 1214 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 GBP1P32455 592 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 PPP1R2P41236 205 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 TAF12Q16514 161 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 RAB3IPQ96QF0 476 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-205ENST00000461221 TRIM75PA6NK02 468 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 SMIM23A6NLE4 172 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 TACC3Q9Y6A5 838 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 TTC21BQ7Z4L5 1316 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 CNGA1P29973 690 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 UBXN1Q04323 297 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 CEP85LQ5SZL2 805 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 IFT81Q8WYA0 676 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 VTI1AQ96AJ9 217 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 CAPZA3Q96KX2 299 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 TLDC2A0PJX2 215 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 A6NNZ2 444 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 GPTP24298 496 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 TUBB8Q3ZCM7 444 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 CCDC25Q86WR0 208 aa10.14□□□□□ -0.79
BRCA1-205ENST00000461221 ARID5AQ03989 594 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 CROCCP2Q86T23 111 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 RAB11FIP4Q86YS3 637 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 TMX3Q96JJ7 454 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 ZBTB3Q9H5J0 574 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 SNRKQ9NRH2 765 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-205ENST00000461221 SLC4A4Q9Y6R1 1079 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 SPDYE3A6NKU9 549 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 RPL13P26373 211 aaKnown RBP10.13□□□□□ -0.79
BRCA1-205ENST00000461221 ERCC5P28715 1186 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-205ENST00000461221 SATB1Q01826 763 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 UBLCP1Q8WVY7 318 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-205ENST00000461221 NUF2Q9BZD4 464 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 VCXQ9H320 206 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 FAM204AQ9H8W3 233 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 IRX3P78415 501 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-205ENST00000461221 GEN1Q17RS7 908 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 DNAJC21Q5F1R6 531 aaKnown RBP10.13□□□□□ -0.79
BRCA1-205ENST00000461221 DHX58Q96C10 678 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 RRP36Q96EU6 259 aaKnown RBP10.13□□□□□ -0.79
BRCA1-205ENST00000461221 GUCA1BQ9UMX6 200 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 EXOC5O00471 708 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 KRT2P35908 639 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 SARNPP82979 210 aaKnown RBP10.13□□□□□ -0.79
BRCA1-205ENST00000461221 TUBB2AQ13885 445 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 NAA25Q14CX7 972 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 NBPF8Q3BBV2 869 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 VWA3BQ502W6 1294 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 ZNF569Q5MCW4 686 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 CNGA4Q8IV77 575 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 KIFAP3Q92845 792 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 TUBB2BQ9BVA1 445 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 CCDC141Q6ZP82 1450 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 CYP7A1P22680 504 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 DPH6Q7L8W6 267 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 EPSTI1Q96J88 318 aa10.13□□□□□ -0.79
BRCA1-205ENST00000461221 ARHGAP24Q8N264 748 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 TTC36A6NLP5 189 aa10.12□□□□□ -0.79
BRCA1-205ENST00000461221 SPTLC2O15270 562 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms