RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 GCKRQ14397 625 aa19.28■□□□□ 0.68
COL16A1-206ENST00000461217 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
COL16A1-206ENST00000461217 ANGEL2Q5VTE6 544 aaKnown RBP19.28■□□□□ 0.68
COL16A1-206ENST00000461217 RGMBQ6NW40 437 aa19.28■□□□□ 0.68
COL16A1-206ENST00000461217 DNAAF4Q8WXU2 420 aa19.28■□□□□ 0.68
COL16A1-206ENST00000461217 WTIPA6NIX2 430 aaPredicted RBP19.27■□□□□ 0.68
COL16A1-206ENST00000461217 ITGA6P23229 1130 aa19.27■□□□□ 0.68
COL16A1-206ENST00000461217 CDCA5Q96FF9 252 aa19.27■□□□□ 0.68
COL16A1-206ENST00000461217 MPHOSPH8Q99549 860 aa19.27■□□□□ 0.68
COL16A1-206ENST00000461217 MYOZ2Q9NPC6 264 aa19.27■□□□□ 0.68
COL16A1-206ENST00000461217 ZNF157P51786 506 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-206ENST00000461217 EXOSC9Q06265 439 aaKnown RBP19.26■□□□□ 0.67
COL16A1-206ENST00000461217 FAM161AQ3B820 660 aa19.26■□□□□ 0.67
COL16A1-206ENST00000461217 WDR63Q8IWG1 891 aa19.26■□□□□ 0.67
COL16A1-206ENST00000461217 LINS1Q8NG48 757 aa19.26■□□□□ 0.67
COL16A1-206ENST00000461217 CCDC102AQ96A19 550 aa19.25■□□□□ 0.67
COL16A1-206ENST00000461217 ZIC5Q96T25 663 aa19.25■□□□□ 0.67
COL16A1-206ENST00000461217 GMLQ99445 158 aa19.25■□□□□ 0.67
COL16A1-206ENST00000461217 PLA2G12BQ9BX93 195 aa19.25■□□□□ 0.67
COL16A1-206ENST00000461217 LEMD3Q9Y2U8 911 aa19.25■□□□□ 0.67
COL16A1-206ENST00000461217 POLR2AP24928 1970 aaKnown RBP19.24■□□□□ 0.67
COL16A1-206ENST00000461217 KCNJ4P48050 445 aa19.24■□□□□ 0.67
COL16A1-206ENST00000461217 OGFOD1Q8N543 542 aa19.24■□□□□ 0.67
COL16A1-206ENST00000461217 ANKRD2Q9GZV1 360 aa19.24■□□□□ 0.67
COL16A1-206ENST00000461217 COA1Q9GZY4 146 aa19.24■□□□□ 0.67
COL16A1-206ENST00000461217 MYO3BQ8WXR4 1341 aa19.24■□□□□ 0.67
COL16A1-206ENST00000461217 VAMP4O75379 141 aa19.23■□□□□ 0.67
COL16A1-206ENST00000461217 MXD3Q9BW11 206 aa19.23■□□□□ 0.67
COL16A1-206ENST00000461217 CHMP3Q9Y3E7 222 aa19.23■□□□□ 0.67
COL16A1-206ENST00000461217 ZNF804BA4D1E1 1349 aa19.23■□□□□ 0.67
COL16A1-206ENST00000461217 PITPNM2Q9BZ72 1349 aa19.23■□□□□ 0.67
COL16A1-206ENST00000461217 ANKRD18BA2A2Z9 1011 aa19.22■□□□□ 0.67
COL16A1-206ENST00000461217 FAM155AB1AL88 458 aaPredicted RBP19.22■□□□□ 0.67
COL16A1-206ENST00000461217 CASP7P55210 303 aa19.22■□□□□ 0.67
COL16A1-206ENST00000461217 DACT2Q5SW24 774 aa19.22■□□□□ 0.67
COL16A1-206ENST00000461217 CCDC85CA6NKD9 419 aa19.21■□□□□ 0.67
COL16A1-206ENST00000461217 F6X3S4 739 aa19.21■□□□□ 0.67
COL16A1-206ENST00000461217 KIF23Q02241 960 aaPredicted RBP19.21■□□□□ 0.67
COL16A1-206ENST00000461217 STRIP1Q5VSL9 837 aa19.21■□□□□ 0.67
COL16A1-206ENST00000461217 TXNRD3Q86VQ6 643 aa19.21■□□□□ 0.67
COL16A1-206ENST00000461217 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
COL16A1-206ENST00000461217 SCAF8Q9UPN6 1271 aaKnown RBP19.21■□□□□ 0.67
COL16A1-206ENST00000461217 CSF1RP07333 972 aa19.2■□□□□ 0.66
COL16A1-206ENST00000461217 SLC10A3P09131 477 aa19.2■□□□□ 0.66
COL16A1-206ENST00000461217 KLRK1P26718 216 aa19.2■□□□□ 0.66
COL16A1-206ENST00000461217 CHRNDQ07001 517 aa19.2■□□□□ 0.66
COL16A1-206ENST00000461217 NBPF9Q3BBW0 867 aa19.2■□□□□ 0.66
COL16A1-206ENST00000461217 CACNA1FO60840 1977 aa19.2■□□□□ 0.66
COL16A1-206ENST00000461217 PAPPA2Q9BXP8 1791 aa19.19■□□□□ 0.66
COL16A1-206ENST00000461217 IFIT5Q13325 482 aaKnown RBP19.19■□□□□ 0.66
COL16A1-206ENST00000461217 TTLL5Q6EMB2 1281 aa19.19■□□□□ 0.66
COL16A1-206ENST00000461217 HDAC9Q9UKV0 1011 aa19.19■□□□□ 0.66
COL16A1-206ENST00000461217 ZNF646O15015 1829 aaPredicted RBP19.18■□□□□ 0.66
COL16A1-206ENST00000461217 SASH1O94885 1247 aa19.18■□□□□ 0.66
COL16A1-206ENST00000461217 FKBP1BP68106 108 aa19.18■□□□□ 0.66
COL16A1-206ENST00000461217 GTF2IP78347 998 aa19.18■□□□□ 0.66
COL16A1-206ENST00000461217 DGKZQ13574 1117 aa19.18■□□□□ 0.66
COL16A1-206ENST00000461217 TTLL12Q14166 644 aaPredicted RBP19.18■□□□□ 0.66
COL16A1-206ENST00000461217 KIAA0825Q8IV33 1275 aa19.18■□□□□ 0.66
COL16A1-206ENST00000461217 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
COL16A1-206ENST00000461217 BEND3Q5T5X7 828 aa19.17■□□□□ 0.66
COL16A1-206ENST00000461217 PRAMEF18Q5VWM3 479 aa19.17■□□□□ 0.66
COL16A1-206ENST00000461217 MCOLN1Q9GZU1 580 aa19.17■□□□□ 0.66
COL16A1-206ENST00000461217 SPINK5Q9NQ38 1064 aaPredicted RBP19.17■□□□□ 0.66
COL16A1-206ENST00000461217 SAGE1Q9NXZ1 904 aa19.17■□□□□ 0.66
COL16A1-206ENST00000461217 WNT10BO00744 389 aa19.16■□□□□ 0.66
COL16A1-206ENST00000461217 TAF5LO75529 589 aa19.16■□□□□ 0.66
COL16A1-206ENST00000461217 TRPA1O75762 1119 aa19.16■□□□□ 0.66
COL16A1-206ENST00000461217 NF2P35240 595 aa19.16■□□□□ 0.66
COL16A1-206ENST00000461217 FOXO4P98177 505 aa19.16■□□□□ 0.66
COL16A1-206ENST00000461217 RASAL3Q86YV0 1011 aa19.16■□□□□ 0.66
COL16A1-206ENST00000461217 HELBQ8NG08 1087 aaPredicted RBP19.16■□□□□ 0.66
COL16A1-206ENST00000461217 SLC4A10Q6U841 1118 aa19.15■□□□□ 0.66
COL16A1-206ENST00000461217 LMBR1LQ6UX01 489 aa19.15■□□□□ 0.66
COL16A1-206ENST00000461217 MOB2Q70IA6 237 aa19.15■□□□□ 0.66
COL16A1-206ENST00000461217 CD209Q9NNX6 404 aa19.15■□□□□ 0.66
COL16A1-206ENST00000461217 RNF186Q9NXI6 227 aa19.15■□□□□ 0.66
COL16A1-206ENST00000461217 C9orf78Q9NZ63 289 aaPredicted RBP19.15■□□□□ 0.66
COL16A1-206ENST00000461217 CASP8AP2Q9UKL3 1982 aa19.15■□□□□ 0.66
COL16A1-206ENST00000461217 UBE2Q2LH0YL09 131 aa19.14■□□□□ 0.65
COL16A1-206ENST00000461217 SNAP23O00161 211 aa19.14■□□□□ 0.65
COL16A1-206ENST00000461217 GRM8O00222 908 aa19.14■□□□□ 0.65
COL16A1-206ENST00000461217 MMP14P50281 582 aa19.14■□□□□ 0.65
COL16A1-206ENST00000461217 CCDC57Q2TAC2 916 aa19.14■□□□□ 0.65
COL16A1-206ENST00000461217 CSRNP1Q96S65 589 aa19.14■□□□□ 0.65
COL16A1-206ENST00000461217 A0A1B0GUL6 1792 aa19.14■□□□□ 0.65
COL16A1-206ENST00000461217 PLIN1O60240 522 aa19.13■□□□□ 0.65
COL16A1-206ENST00000461217 ZNF804AQ7Z570 1209 aa19.13■□□□□ 0.65
COL16A1-206ENST00000461217 APOBEC3FQ8IUX4 373 aaKnown RBP19.13■□□□□ 0.65
COL16A1-206ENST00000461217 REM2Q8IYK8 340 aaPredicted RBP19.13■□□□□ 0.65
COL16A1-206ENST00000461217 CNNM1Q9NRU3 951 aa19.13■□□□□ 0.65
COL16A1-206ENST00000461217 LDHAL6AQ6ZMR3 332 aa19.12■□□□□ 0.65
COL16A1-206ENST00000461217 ZNF594Q96JF6 807 aaPredicted RBP19.12■□□□□ 0.65
COL16A1-206ENST00000461217 AKAP11Q9UKA4 1901 aa19.12■□□□□ 0.65
COL16A1-206ENST00000461217 F8W031 263 aaPredicted RBP19.11■□□□□ 0.65
COL16A1-206ENST00000461217 ALDH1L1O75891 902 aa19.11■□□□□ 0.65
COL16A1-206ENST00000461217 PRKG1Q13976 671 aa19.11■□□□□ 0.65
COL16A1-206ENST00000461217 DLGAP5Q15398 846 aa19.11■□□□□ 0.65
COL16A1-206ENST00000461217 EPHA10Q5JZY3 1008 aa19.11■□□□□ 0.65
COL16A1-206ENST00000461217 SRCIN1Q9C0H9 1055 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms