RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 MYH16Q9H6N6 1097 aa7.7□□□□□ -1.18
NUP98-208ENST00000461047 BABAM1Q9NWV8 329 aa7.7□□□□□ -1.18
NUP98-208ENST00000461047 RGPD5Q99666 1765 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 GLI3P10071 1580 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 BTBD11A6QL63 1104 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 APBB1O00213 710 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 RAB15P59190 212 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 INSM1Q01101 510 aaPredicted RBP7.69□□□□□ -1.18
NUP98-208ENST00000461047 WWC1Q8IX03 1113 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 NFATC2IPQ8NCF5 419 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 IRF7Q92985 503 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 SLC52A2Q9HAB3 445 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 IL16Q14005 1332 aa7.69□□□□□ -1.18
NUP98-208ENST00000461047 INTS6LQ5JSJ4 861 aaKnown RBP7.68□□□□□ -1.18
NUP98-208ENST00000461047 MCM10Q7L590 875 aa7.68□□□□□ -1.18
NUP98-208ENST00000461047 IL17REQ8NFR9 667 aa7.68□□□□□ -1.18
NUP98-208ENST00000461047 ACSBG1Q96GR2 724 aa7.68□□□□□ -1.18
NUP98-208ENST00000461047 IFT57Q9NWB7 429 aa7.68□□□□□ -1.18
NUP98-208ENST00000461047 LAS1LQ9Y4W2 734 aaKnown RBP7.68□□□□□ -1.18
NUP98-208ENST00000461047 RGPD1P0DJD0 1748 aa7.68□□□□□ -1.18
NUP98-208ENST00000461047 PARP4Q9UKK3 1724 aaKnown RBP7.68□□□□□ -1.18
NUP98-208ENST00000461047 BCL9O00512 1426 aa7.68□□□□□ -1.18
NUP98-208ENST00000461047 RGS12O14924 1447 aa7.68□□□□□ -1.18
NUP98-208ENST00000461047 SOBPA7XYQ1 873 aa7.67□□□□□ -1.18
NUP98-208ENST00000461047 E9PSI1 815 aa7.67□□□□□ -1.18
NUP98-208ENST00000461047 TRIM37O94972 964 aa7.67□□□□□ -1.18
NUP98-208ENST00000461047 VEGFBP49765 207 aa7.67□□□□□ -1.18
NUP98-208ENST00000461047 DCTN1Q14203 1278 aa7.67□□□□□ -1.18
NUP98-208ENST00000461047 OCSTAMPQ9BR26 566 aa7.67□□□□□ -1.18
NUP98-208ENST00000461047 TEX13AQ9BXU3 409 aaPredicted RBP7.67□□□□□ -1.18
NUP98-208ENST00000461047 LGR6Q9HBX8 967 aa7.67□□□□□ -1.18
NUP98-208ENST00000461047 TSPYL4Q9UJ04 414 aa7.67□□□□□ -1.18
NUP98-208ENST00000461047 ZBBXA8MT70 800 aa7.66□□□□□ -1.18
NUP98-208ENST00000461047 APBA3O96018 575 aa7.66□□□□□ -1.18
NUP98-208ENST00000461047 BAG6P46379 1132 aa7.66□□□□□ -1.18
NUP98-208ENST00000461047 CBLBQ13191 982 aa7.66□□□□□ -1.18
NUP98-208ENST00000461047 FAM182BQ5T319 152 aa7.66□□□□□ -1.18
NUP98-208ENST00000461047 NPM2Q86SE8 214 aaKnown RBP7.66□□□□□ -1.18
NUP98-208ENST00000461047 BANK1Q8NDB2 785 aa7.66□□□□□ -1.18
NUP98-208ENST00000461047 PIGBQ92521 554 aa7.66□□□□□ -1.18
NUP98-208ENST00000461047 YTHDC1Q96MU7 727 aaKnown RBP7.66□□□□□ -1.18
NUP98-208ENST00000461047 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
NUP98-208ENST00000461047 TTLL8A6PVC2 850 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 H3BM21 787 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 CHL1O00533 1208 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 WIPF1O43516 503 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 ZNF790Q6PG37 636 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 ZBED9Q6R2W3 1325 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 Q6ZVU0 165 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 CEMIPQ8WUJ3 1361 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 ZNF592Q92610 1267 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 FMNL2Q96PY5 1086 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 THSD7AQ9UPZ6 1657 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 ZNF330Q9Y3S2 320 aaPredicted RBP7.65□□□□□ -1.18
NUP98-208ENST00000461047 PCDHB9Q9Y5E1 797 aa7.65□□□□□ -1.18
NUP98-208ENST00000461047 RGPD2P0DJD1 1756 aa7.64□□□□□ -1.19
NUP98-208ENST00000461047 SOS1Q07889 1333 aaPredicted RBP7.64□□□□□ -1.19
NUP98-208ENST00000461047 PLSCR1O15162 318 aa7.64□□□□□ -1.19
NUP98-208ENST00000461047 KCNQ2O43526 872 aa7.64□□□□□ -1.19
NUP98-208ENST00000461047 STARD3NLO95772 234 aa7.64□□□□□ -1.19
NUP98-208ENST00000461047 SNRPA1P09661 255 aaKnown RBP7.64□□□□□ -1.19
NUP98-208ENST00000461047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.64□□□□□ -1.19
NUP98-208ENST00000461047 SLC27A3Q5K4L6 730 aa7.64□□□□□ -1.19
NUP98-208ENST00000461047 THUMPD2Q9BTF0 503 aaKnown RBP7.64□□□□□ -1.19
NUP98-208ENST00000461047 SENP3-EIF4A1A0A087X0R7 540 aa7.63□□□□□ -1.19
NUP98-208ENST00000461047 PTCD1O75127 700 aaKnown RBP7.63□□□□□ -1.19
NUP98-208ENST00000461047 RELBQ01201 579 aa7.63□□□□□ -1.19
NUP98-208ENST00000461047 ATG3Q9NT62 314 aa7.63□□□□□ -1.19
NUP98-208ENST00000461047 MIS18AQ9NYP9 233 aa7.63□□□□□ -1.19
NUP98-208ENST00000461047 PKD1L3Q7Z443 1732 aa7.63□□□□□ -1.19
NUP98-208ENST00000461047 LRRC37A3O60309 1634 aa7.63□□□□□ -1.19
NUP98-208ENST00000461047 KDM6AO15550 1401 aaPredicted RBP7.62□□□□□ -1.19
NUP98-208ENST00000461047 FIGNL2A6NMB9 653 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 HOXB7P09629 217 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 CT47B1P0C2W7 299 aaPredicted RBP7.62□□□□□ -1.19
NUP98-208ENST00000461047 ZNF853P0CG23 659 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 SLFN5Q08AF3 891 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 ZNF428Q96B54 188 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 PRM3Q9NNZ6 103 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 TMPRSS4Q9NRS4 437 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 MBIPQ9NS73 344 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 DNMT3LQ9UJW3 386 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 CCNL1Q9UK58 526 aaPredicted RBP7.62□□□□□ -1.19
NUP98-208ENST00000461047 ASAP1Q9ULH1 1129 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 NDUFB9Q9Y6M9 179 aa7.62□□□□□ -1.19
NUP98-208ENST00000461047 PALLDQ8WX93 1383 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 ZNF521Q96K83 1311 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 LOC102724428A0A0B4J2F2 783 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 ERVH48-1M5A8F1 160 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 SPINT1O43278 529 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 FBXO45P0C2W1 286 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 GMPRP36959 345 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 SIK1P57059 783 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 MCCD1P59942 119 aaPredicted RBP7.61□□□□□ -1.19
NUP98-208ENST00000461047 EIF4A1P60842 406 aaKnown RBP7.61□□□□□ -1.19
NUP98-208ENST00000461047 SLC39A6Q13433 755 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 CCDC30Q5VVM6 783 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 ZNF784Q8NCA9 323 aaPredicted RBP7.61□□□□□ -1.19
NUP98-208ENST00000461047 AGBL1Q96MI9 1066 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 STK31Q9BXU1 1019 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms