RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TAF7LQ5H9L4 462 aa16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 RSBN1LQ6PCB5 846 aaPredicted RBP16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 USP17L1Q7RTZ2 530 aa16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 GLIS2Q9BZE0 524 aaPredicted RBP16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 ZNF408Q9H9D4 720 aa16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 UTYO14607 1347 aa16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 COL4A1P02462 1669 aa16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 MED23Q9ULK4 1368 aa16.62■□□□□ 0.25
RAB11FIP3-207ENST00000461009 NBPF7P0C2Y1 421 aaPredicted RBP16.61■□□□□ 0.25
RAB11FIP3-207ENST00000461009 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
RAB11FIP3-207ENST00000461009 KIF4BQ2VIQ3 1234 aa16.61■□□□□ 0.25
RAB11FIP3-207ENST00000461009 CST9Q5W186 159 aa16.61■□□□□ 0.25
RAB11FIP3-207ENST00000461009 BEGAINQ9BUH8 593 aa16.61■□□□□ 0.25
RAB11FIP3-207ENST00000461009 COA1Q9GZY4 146 aa16.61■□□□□ 0.25
RAB11FIP3-207ENST00000461009 USP44Q9H0E7 712 aa16.61■□□□□ 0.25
RAB11FIP3-207ENST00000461009 TLL2Q9Y6L7 1015 aa16.61■□□□□ 0.25
RAB11FIP3-207ENST00000461009 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 MS4A1P11836 297 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 TRIM27P14373 513 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 FOXO4P98177 505 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 COL13A1Q5TAT6 717 aaPredicted RBP16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 INTS3Q68E01 1043 aaKnown RBP16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 LMBR1LQ6UX01 489 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 KRT26Q7Z3Y9 468 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 USP48Q86UV5 1035 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 OGFOD1Q8N543 542 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 RCAN3Q9UKA8 241 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 ZNF804BA4D1E1 1349 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 TRPM7Q96QT4 1865 aa16.6■□□□□ 0.25
RAB11FIP3-207ENST00000461009 CTCFP49711 727 aaPredicted RBP16.59■□□□□ 0.25
RAB11FIP3-207ENST00000461009 MMP14P50281 582 aa16.59■□□□□ 0.25
RAB11FIP3-207ENST00000461009 FMR1Q06787 632 aaKnown RBP eCLIP16.59■□□□□ 0.25
RAB11FIP3-207ENST00000461009 GRM1Q13255 1194 aa16.59■□□□□ 0.25
RAB11FIP3-207ENST00000461009 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
RAB11FIP3-207ENST00000461009 FTSJ3Q8IY81 847 aaKnown RBP16.59■□□□□ 0.25
RAB11FIP3-207ENST00000461009 TNS4Q8IZW8 715 aa16.59■□□□□ 0.25
RAB11FIP3-207ENST00000461009 CAPNS2Q96L46 248 aa16.59■□□□□ 0.25
RAB11FIP3-207ENST00000461009 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
RAB11FIP3-207ENST00000461009 GNAI3P08754 354 aa16.58■□□□□ 0.24
RAB11FIP3-207ENST00000461009 UBTFL1P0CB47 393 aaPredicted RBP16.58■□□□□ 0.24
RAB11FIP3-207ENST00000461009 CHRNDQ07001 517 aa16.58■□□□□ 0.24
RAB11FIP3-207ENST00000461009 DZIP1LQ8IYY4 767 aaKnown RBP16.58■□□□□ 0.24
RAB11FIP3-207ENST00000461009 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
RAB11FIP3-207ENST00000461009 SUCLG2Q96I99 432 aa16.58■□□□□ 0.24
RAB11FIP3-207ENST00000461009 HHIPL1Q96JK4 782 aa16.58■□□□□ 0.24
RAB11FIP3-207ENST00000461009 ZNF280AP59817 542 aaPredicted RBP16.57■□□□□ 0.24
RAB11FIP3-207ENST00000461009 EPHA10Q5JZY3 1008 aa16.57■□□□□ 0.24
RAB11FIP3-207ENST00000461009 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
RAB11FIP3-207ENST00000461009 SAPCD2Q86UD0 394 aa16.57■□□□□ 0.24
RAB11FIP3-207ENST00000461009 C2orf69Q8N8R5 385 aa16.57■□□□□ 0.24
RAB11FIP3-207ENST00000461009 WBP1LQ9NX94 342 aa16.57■□□□□ 0.24
RAB11FIP3-207ENST00000461009 SPEF2Q9C093 1822 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 ZNF609O15014 1411 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 MAP2K2P36507 400 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 SCARF1Q14162 830 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 CYP4F22Q6NT55 531 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 LDHAL6AQ6ZMR3 332 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 MYOZ2Q9NPC6 264 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 CNNM1Q9NRU3 951 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 HDAC9Q9UKV0 1011 aa16.56■□□□□ 0.24
RAB11FIP3-207ENST00000461009 FOXN1O15353 648 aa16.55■□□□□ 0.24
RAB11FIP3-207ENST00000461009 BICC1Q9H694 974 aaKnown RBP16.55■□□□□ 0.24
RAB11FIP3-207ENST00000461009 PRDM10Q9NQV6 1147 aa16.55■□□□□ 0.24
RAB11FIP3-207ENST00000461009 GGA3Q9NZ52 723 aa16.55■□□□□ 0.24
RAB11FIP3-207ENST00000461009 EGFRP00533 1210 aa16.54■□□□□ 0.24
RAB11FIP3-207ENST00000461009 RABL6Q3YEC7 729 aaPredicted RBP16.54■□□□□ 0.24
RAB11FIP3-207ENST00000461009 ZNF804AQ7Z570 1209 aa16.54■□□□□ 0.24
RAB11FIP3-207ENST00000461009 TMEM57Q8N5G2 664 aa16.54■□□□□ 0.24
RAB11FIP3-207ENST00000461009 KAZALD1Q96I82 304 aa16.54■□□□□ 0.24
RAB11FIP3-207ENST00000461009 GMLQ99445 158 aa16.54■□□□□ 0.24
RAB11FIP3-207ENST00000461009 GBA2Q9HCG7 927 aaPredicted RBP16.54■□□□□ 0.24
RAB11FIP3-207ENST00000461009 SCN9AQ15858 1988 aa16.54■□□□□ 0.24
RAB11FIP3-207ENST00000461009 PCNTO95613 3336 aa16.53■□□□□ 0.24
RAB11FIP3-207ENST00000461009 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
RAB11FIP3-207ENST00000461009 TAF5LO75529 589 aa16.53■□□□□ 0.24
RAB11FIP3-207ENST00000461009 HUNKP57058 714 aa16.53■□□□□ 0.24
RAB11FIP3-207ENST00000461009 DACT2Q5SW24 774 aa16.53■□□□□ 0.24
RAB11FIP3-207ENST00000461009 ANGEL2Q5VTE6 544 aaKnown RBP16.53■□□□□ 0.24
RAB11FIP3-207ENST00000461009 TNNQ9UQP3 1299 aa16.53■□□□□ 0.24
RAB11FIP3-207ENST00000461009 PITPNM2Q9BZ72 1349 aa16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 ADM5C9JUS6 153 aa16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 PLIN1O60240 522 aa16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 GTF2IP78347 998 aa16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 C15orf52Q6ZUT6 534 aaKnown RBP16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 ANKRD44Q8N8A2 993 aa16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 HELBQ8NG08 1087 aaPredicted RBP16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 MEIS3Q99687 375 aa16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 CD209Q9NNX6 404 aa16.52■□□□□ 0.24
RAB11FIP3-207ENST00000461009 CA12O43570 354 aa16.51■□□□□ 0.23
RAB11FIP3-207ENST00000461009 GNAI2P04899 355 aa16.51■□□□□ 0.23
RAB11FIP3-207ENST00000461009 NOGQ13253 232 aa16.51■□□□□ 0.23
RAB11FIP3-207ENST00000461009 ITPRIPQ8IWB1 547 aa16.51■□□□□ 0.23
RAB11FIP3-207ENST00000461009 CCDC102AQ96A19 550 aa16.51■□□□□ 0.23
RAB11FIP3-207ENST00000461009 LRRFIP2Q9Y608 721 aaKnown RBP16.51■□□□□ 0.23
RAB11FIP3-207ENST00000461009 PSME4Q14997 1843 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms