RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 HYAL2Q12891 473 aa4.67□□□□□ -1.66
HPS3-203ENST00000460822 AAMPQ13685 434 aa4.67□□□□□ -1.66
HPS3-203ENST00000460822 ZSCAN29Q8IWY8 852 aaPredicted RBP4.67□□□□□ -1.66
HPS3-203ENST00000460822 DTWD1Q8N5C7 304 aa4.67□□□□□ -1.66
HPS3-203ENST00000460822 PLD4Q96BZ4 506 aa4.67□□□□□ -1.66
HPS3-203ENST00000460822 USP21Q9UK80 565 aa4.67□□□□□ -1.66
HPS3-203ENST00000460822 FAM177BA6PVY3 158 aa4.66□□□□□ -1.66
HPS3-203ENST00000460822 ALKBH2Q6NS38 261 aa4.66□□□□□ -1.66
HPS3-203ENST00000460822 NBPF11Q86T75 865 aa4.66□□□□□ -1.66
HPS3-203ENST00000460822 HELQQ8TDG4 1101 aa4.66□□□□□ -1.66
HPS3-203ENST00000460822 RECKO95980 971 aa4.65□□□□□ -1.66
HPS3-203ENST00000460822 GDF6Q6KF10 455 aaPredicted RBP4.65□□□□□ -1.66
HPS3-203ENST00000460822 FMR1NBQ8N0W7 255 aaPredicted RBP4.65□□□□□ -1.66
HPS3-203ENST00000460822 CACTIN-AS1Q8N1I8 211 aa4.65□□□□□ -1.66
HPS3-203ENST00000460822 DCAF11Q8TEB1 546 aa4.65□□□□□ -1.66
HPS3-203ENST00000460822 DYRK3O43781 588 aa4.65□□□□□ -1.67
HPS3-203ENST00000460822 VAMP1P23763 118 aa4.65□□□□□ -1.67
HPS3-203ENST00000460822 TRIP4Q15650 581 aaPredicted RBP4.65□□□□□ -1.67
HPS3-203ENST00000460822 EAPPQ56P03 285 aaPredicted RBP4.65□□□□□ -1.67
HPS3-203ENST00000460822 ZNF438Q7Z4V0 828 aa4.65□□□□□ -1.67
HPS3-203ENST00000460822 OR13H1Q8NG92 308 aa4.65□□□□□ -1.67
HPS3-203ENST00000460822 EDEM1Q92611 657 aa4.65□□□□□ -1.67
HPS3-203ENST00000460822 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
HPS3-203ENST00000460822 ABI2Q9NYB9 513 aaPredicted RBP4.65□□□□□ -1.67
HPS3-203ENST00000460822 ZBTB39O15060 712 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 SMNDC1O75940 238 aaKnown RBP eCLIP4.64□□□□□ -1.67
HPS3-203ENST00000460822 DNM1Q05193 864 aaKnown RBP4.64□□□□□ -1.67
HPS3-203ENST00000460822 TSNAXIP1Q2TAA8 658 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 FAM26DQ5JW98 314 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 FBXO11Q86XK2 927 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 IL22RA1Q8N6P7 574 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 LENG1Q96BZ8 264 aaPredicted RBP4.64□□□□□ -1.67
HPS3-203ENST00000460822 NUDT16Q96DE0 195 aaKnown RBP4.64□□□□□ -1.67
HPS3-203ENST00000460822 FAM13AO94988 1023 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 HOXD8P13378 290 aaPredicted RBP4.64□□□□□ -1.67
HPS3-203ENST00000460822 MPSTP25325 297 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 GRIK5Q16478 980 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 C8orf34Q49A92 452 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 PDE12Q6L8Q7 609 aaKnown RBP4.64□□□□□ -1.67
HPS3-203ENST00000460822 TMC7Q7Z402 723 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 TXNRD3Q86VQ6 643 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 NCAPG2Q86XI2 1143 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 MUC3BQ9H195 1237 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 ELP3Q9H9T3 547 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 TPSG1Q9NRR2 321 aa4.64□□□□□ -1.67
HPS3-203ENST00000460822 P4HBP07237 508 aaKnown RBP4.63□□□□□ -1.67
HPS3-203ENST00000460822 SELPP16109 830 aa4.63□□□□□ -1.67
HPS3-203ENST00000460822 ADGRE1Q14246 886 aa4.63□□□□□ -1.67
HPS3-203ENST00000460822 COL19A1Q14993 1142 aa4.63□□□□□ -1.67
HPS3-203ENST00000460822 ATCAYQ86WG3 371 aa4.63□□□□□ -1.67
HPS3-203ENST00000460822 NDUFB5O43674 189 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 NPR3P17342 541 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 MZF1P28698 734 aaPredicted RBP4.62□□□□□ -1.67
HPS3-203ENST00000460822 MBTPS1Q14703 1052 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 CEP135Q66GS9 1140 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 FAM117BQ6P1L5 589 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 IGF2-ASQ6U949 168 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 SHISA2Q6UWI4 295 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 MAP4K3Q8IVH8 894 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 PMEPA1Q969W9 287 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 RBCK1Q9BYM8 510 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 BCL11AQ9H165 835 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 SRA1Q9HD15 236 aaKnown RBP4.62□□□□□ -1.67
HPS3-203ENST00000460822 EIF1AXP47813 144 aaKnown RBP4.62□□□□□ -1.67
HPS3-203ENST00000460822 LRP8Q14114 963 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 TMC1Q8TDI8 760 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 BACH2Q9BYV9 841 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 PPME1Q9Y570 386 aa4.62□□□□□ -1.67
HPS3-203ENST00000460822 PDGFAP04085 211 aa4.61□□□□□ -1.67
HPS3-203ENST00000460822 CES1P23141 567 aa4.61□□□□□ -1.67
HPS3-203ENST00000460822 CDC27P30260 824 aa4.61□□□□□ -1.67
HPS3-203ENST00000460822 PRSS36Q5K4E3 855 aa4.61□□□□□ -1.67
HPS3-203ENST00000460822 TP53INP1Q96A56 240 aa4.61□□□□□ -1.67
HPS3-203ENST00000460822 C8orf37Q96NL8 207 aa4.61□□□□□ -1.67
HPS3-203ENST00000460822 LACRTQ9GZZ8 138 aa4.61□□□□□ -1.67
HPS3-203ENST00000460822 BRPF3Q9ULD4 1205 aa4.61□□□□□ -1.67
HPS3-203ENST00000460822 TRIM33Q9UPN9 1127 aa4.61□□□□□ -1.67
HPS3-203ENST00000460822 TREHO43280 583 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 HYAL3O43820 417 aaPredicted RBP4.6□□□□□ -1.67
HPS3-203ENST00000460822 USP5P45974 858 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 ZC3H6P61129 1189 aaKnown RBP4.6□□□□□ -1.67
HPS3-203ENST00000460822 EHHADHQ08426 723 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 MRPL18Q9H0U6 180 aaKnown RBP4.6□□□□□ -1.67
HPS3-203ENST00000460822 CCDC87Q9NVE4 849 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 TMEM63CQ9P1W3 806 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 CYP2E1P05181 493 aaPredicted RBP4.6□□□□□ -1.67
HPS3-203ENST00000460822 PTPRAP18433 802 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 MAPK8P45983 427 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 IREB2P48200 963 aaKnown RBP4.6□□□□□ -1.67
HPS3-203ENST00000460822 CABP4P57796 275 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 ATP11AP98196 1134 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 FMR1Q06787 632 aaKnown RBP eCLIP4.6□□□□□ -1.67
HPS3-203ENST00000460822 MRPL58Q14197 206 aaKnown RBP4.6□□□□□ -1.67
HPS3-203ENST00000460822 COL13A1Q5TAT6 717 aaPredicted RBP4.6□□□□□ -1.67
HPS3-203ENST00000460822 XKR5Q6UX68 686 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 ILDR2Q71H61 639 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 WFDC12Q8WWY7 111 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 FAM161BQ96MY7 647 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 PBX4Q9BYU1 374 aa4.6□□□□□ -1.67
HPS3-203ENST00000460822 RASSF4Q9H2L5 321 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms