RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 SLC4A10Q6U841 1118 aa19.64■□□□□ 0.73
SDF4-204ENST00000459994 ATF7IPQ6VMQ6 1270 aa19.64■□□□□ 0.73
SDF4-204ENST00000459994 G3V3G9 751 aa19.63■□□□□ 0.73
SDF4-204ENST00000459994 IGHMBP2P38935 993 aaKnown RBP19.63■□□□□ 0.73
SDF4-204ENST00000459994 DCAF8Q5TAQ9 597 aa19.63■□□□□ 0.73
SDF4-204ENST00000459994 ZNF594Q96JF6 807 aaPredicted RBP19.63■□□□□ 0.73
SDF4-204ENST00000459994 ZNF609O15014 1411 aa19.62■□□□□ 0.73
SDF4-204ENST00000459994 GRM8O00222 908 aa19.62■□□□□ 0.73
SDF4-204ENST00000459994 CELF2O95319 508 aaKnown RBP19.62■□□□□ 0.73
SDF4-204ENST00000459994 MS4A1P11836 297 aa19.62■□□□□ 0.73
SDF4-204ENST00000459994 RPS12P25398 132 aaKnown RBP19.62■□□□□ 0.73
SDF4-204ENST00000459994 CHRNDQ07001 517 aa19.62■□□□□ 0.73
SDF4-204ENST00000459994 RSBN1LQ6PCB5 846 aaPredicted RBP19.62■□□□□ 0.73
SDF4-204ENST00000459994 LMBR1LQ6UX01 489 aa19.62■□□□□ 0.73
SDF4-204ENST00000459994 USP48Q86UV5 1035 aa19.62■□□□□ 0.73
SDF4-204ENST00000459994 HELBQ8NG08 1087 aaPredicted RBP19.62■□□□□ 0.73
SDF4-204ENST00000459994 KAZALD1Q96I82 304 aa19.62■□□□□ 0.73
SDF4-204ENST00000459994 GMLQ99445 158 aa19.62■□□□□ 0.73
SDF4-204ENST00000459994 WDR33Q9C0J8 1336 aaKnown RBP19.61■□□□□ 0.73
SDF4-204ENST00000459994 IRS2Q9Y4H2 1338 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 ADM5C9JUS6 153 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 FOXN1O15353 648 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 TAF5LO75529 589 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 TRIM27P14373 513 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 KIF4BQ2VIQ3 1234 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 CYP4F22Q6NT55 531 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 ZC3H15Q8WU90 426 aaKnown RBP19.61■□□□□ 0.73
SDF4-204ENST00000459994 SUCLG2Q96I99 432 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 ZNF408Q9H9D4 720 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 CHMP3Q9Y3E7 222 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 TLL2Q9Y6L7 1015 aa19.61■□□□□ 0.73
SDF4-204ENST00000459994 ANKRD18BA2A2Z9 1011 aa19.6■□□□□ 0.73
SDF4-204ENST00000459994 PLIN1O60240 522 aa19.6■□□□□ 0.73
SDF4-204ENST00000459994 NBPF7P0C2Y1 421 aaPredicted RBP19.6■□□□□ 0.73
SDF4-204ENST00000459994 PDE3AQ14432 1141 aa19.6■□□□□ 0.73
SDF4-204ENST00000459994 MPHOSPH8Q99549 860 aa19.6■□□□□ 0.73
SDF4-204ENST00000459994 ZNF804BA4D1E1 1349 aa19.59■□□□□ 0.73
SDF4-204ENST00000459994 ALDH1L1O75891 902 aa19.59■□□□□ 0.73
SDF4-204ENST00000459994 CDC37L1Q7L3B6 337 aa19.59■□□□□ 0.73
SDF4-204ENST00000459994 SRCIN1Q9C0H9 1055 aa19.59■□□□□ 0.73
SDF4-204ENST00000459994 SCAF8Q9UPN6 1271 aaKnown RBP19.59■□□□□ 0.73
SDF4-204ENST00000459994 ECM29Q5VYK3 1845 aa19.58■□□□□ 0.73
SDF4-204ENST00000459994 USP17L3A6NCW0 530 aa19.58■□□□□ 0.72
SDF4-204ENST00000459994 USP17L4A6NCW7 530 aa19.58■□□□□ 0.72
SDF4-204ENST00000459994 ZNF280AP59817 542 aaPredicted RBP19.58■□□□□ 0.72
SDF4-204ENST00000459994 GRM1Q13255 1194 aa19.58■□□□□ 0.72
SDF4-204ENST00000459994 DACT2Q5SW24 774 aa19.58■□□□□ 0.72
SDF4-204ENST00000459994 USP17L1Q7RTZ2 530 aa19.58■□□□□ 0.72
SDF4-204ENST00000459994 PODNQ7Z5L7 613 aa19.58■□□□□ 0.72
SDF4-204ENST00000459994 DZIP1LQ8IYY4 767 aaKnown RBP19.58■□□□□ 0.72
SDF4-204ENST00000459994 GGA3Q9NZ52 723 aa19.58■□□□□ 0.72
SDF4-204ENST00000459994 C9orf78Q9NZ63 289 aaPredicted RBP19.58■□□□□ 0.72
SDF4-204ENST00000459994 LEMD3Q9Y2U8 911 aa19.58■□□□□ 0.72
SDF4-204ENST00000459994 AOC2O75106 756 aa19.57■□□□□ 0.72
SDF4-204ENST00000459994 IFIT5Q13325 482 aaKnown RBP19.57■□□□□ 0.72
SDF4-204ENST00000459994 PAXIP1Q6ZW49 1069 aaPredicted RBP19.57■□□□□ 0.72
SDF4-204ENST00000459994 SAPCD2Q86UD0 394 aa19.57■□□□□ 0.72
SDF4-204ENST00000459994 AGBL3Q8NEM8 1001 aa19.57■□□□□ 0.72
SDF4-204ENST00000459994 FBXW7Q969H0 707 aa19.57■□□□□ 0.72
SDF4-204ENST00000459994 CAPNS2Q96L46 248 aa19.57■□□□□ 0.72
SDF4-204ENST00000459994 KRT26Q7Z3Y9 468 aa19.56■□□□□ 0.72
SDF4-204ENST00000459994 ANKRD2Q9GZV1 360 aa19.56■□□□□ 0.72
SDF4-204ENST00000459994 WBP1LQ9NX94 342 aa19.56■□□□□ 0.72
SDF4-204ENST00000459994 TNNQ9UQP3 1299 aa19.56■□□□□ 0.72
SDF4-204ENST00000459994 UTYO14607 1347 aa19.55■□□□□ 0.72
SDF4-204ENST00000459994 SCARF1Q14162 830 aa19.55■□□□□ 0.72
SDF4-204ENST00000459994 FTSJ3Q8IY81 847 aaKnown RBP19.55■□□□□ 0.72
SDF4-204ENST00000459994 CLUAP1Q96AJ1 413 aa19.55■□□□□ 0.72
SDF4-204ENST00000459994 PUS3Q9BZE2 481 aaKnown RBP19.55■□□□□ 0.72
SDF4-204ENST00000459994 COA1Q9GZY4 146 aa19.55■□□□□ 0.72
SDF4-204ENST00000459994 MYOZ2Q9NPC6 264 aa19.55■□□□□ 0.72
SDF4-204ENST00000459994 ARAP2Q8WZ64 1704 aa19.54■□□□□ 0.72
SDF4-204ENST00000459994 USP17L8P0C7I0 530 aa19.54■□□□□ 0.72
SDF4-204ENST00000459994 RLBP1P12271 317 aa19.54■□□□□ 0.72
SDF4-204ENST00000459994 ANGEL2Q5VTE6 544 aaKnown RBP19.54■□□□□ 0.72
SDF4-204ENST00000459994 INTS3Q68E01 1043 aaKnown RBP19.54■□□□□ 0.72
SDF4-204ENST00000459994 ANKRD44Q8N8A2 993 aa19.54■□□□□ 0.72
SDF4-204ENST00000459994 BICC1Q9H694 974 aaKnown RBP19.54■□□□□ 0.72
SDF4-204ENST00000459994 C20orf194Q5TEA3 1177 aa19.53■□□□□ 0.72
SDF4-204ENST00000459994 PANK1Q8TE04 598 aa19.53■□□□□ 0.72
SDF4-204ENST00000459994 DCPSQ96C86 337 aaKnown RBP19.53■□□□□ 0.72
SDF4-204ENST00000459994 ZIC5Q96T25 663 aa19.53■□□□□ 0.72
SDF4-204ENST00000459994 CD209Q9NNX6 404 aa19.53■□□□□ 0.72
SDF4-204ENST00000459994 KCNJ4P48050 445 aa19.52■□□□□ 0.72
SDF4-204ENST00000459994 GTF2IP78347 998 aa19.52■□□□□ 0.72
SDF4-204ENST00000459994 CCDC57Q2TAC2 916 aa19.52■□□□□ 0.72
SDF4-204ENST00000459994 NBPF9Q3BBW0 867 aa19.52■□□□□ 0.72
SDF4-204ENST00000459994 STRIP1Q5VSL9 837 aa19.52■□□□□ 0.72
SDF4-204ENST00000459994 LDHAL6AQ6ZMR3 332 aa19.52■□□□□ 0.72
SDF4-204ENST00000459994 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.72
SDF4-204ENST00000459994 TTLL5Q6EMB2 1281 aa19.51■□□□□ 0.71
SDF4-204ENST00000459994 CERS5Q8N5B7 392 aa19.51■□□□□ 0.71
SDF4-204ENST00000459994 USP44Q9H0E7 712 aa19.51■□□□□ 0.71
SDF4-204ENST00000459994 JAG2Q9Y219 1238 aa19.51■□□□□ 0.71
SDF4-204ENST00000459994 MYH13Q9UKX3 1938 aa19.51■□□□□ 0.71
SDF4-204ENST00000459994 RABL6Q3YEC7 729 aaPredicted RBP19.5■□□□□ 0.71
SDF4-204ENST00000459994 TAF7LQ5H9L4 462 aa19.5■□□□□ 0.71
SDF4-204ENST00000459994 C15orf52Q6ZUT6 534 aaKnown RBP19.5■□□□□ 0.71
SDF4-204ENST00000459994 KIAA0825Q8IV33 1275 aa19.5■□□□□ 0.71
SDF4-204ENST00000459994 TNS4Q8IZW8 715 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms