RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 MCAMP43121 646 aa29.5■■■□□ 2.31
U2AF1-204ENST00000459639 FKBP4Q02790 459 aaKnown RBP eCLIP29.5■■■□□ 2.31
U2AF1-204ENST00000459639 KIAA1211Q6ZU35 1233 aa29.5■■■□□ 2.31
U2AF1-204ENST00000459639 ILDR1Q86SU0 546 aaPredicted RBP29.5■■■□□ 2.31
U2AF1-204ENST00000459639 FAM227BQ96M60 508 aa29.5■■■□□ 2.31
U2AF1-204ENST00000459639 MED23Q9ULK4 1368 aa29.5■■■□□ 2.31
U2AF1-204ENST00000459639 A0A0D9SFI3 127 aa29.49■■■□□ 2.31
U2AF1-204ENST00000459639 LSG1Q9H089 658 aaKnown RBP29.49■■■□□ 2.31
U2AF1-204ENST00000459639 LRRC37AA6NMS7 1700 aa29.49■■■□□ 2.31
U2AF1-204ENST00000459639 DOCK2Q92608 1830 aa29.48■■■□□ 2.31
U2AF1-204ENST00000459639 ZAP70P43403 619 aa29.48■■■□□ 2.31
U2AF1-204ENST00000459639 LRRFIP1Q32MZ4 808 aaKnown RBP29.48■■■□□ 2.31
U2AF1-204ENST00000459639 MSL1Q68DK7 614 aa29.48■■■□□ 2.31
U2AF1-204ENST00000459639 COL11A2P13942 1736 aaPredicted RBP29.48■■■□□ 2.31
U2AF1-204ENST00000459639 CRAMP1Q96RY5 1269 aa29.47■■■□□ 2.31
U2AF1-204ENST00000459639 ANTXR1Q9H6X2 564 aa29.47■■■□□ 2.31
U2AF1-204ENST00000459639 BECN1Q14457 450 aa29.47■■■□□ 2.31
U2AF1-204ENST00000459639 TTF1Q15361 905 aaPredicted RBP29.47■■■□□ 2.31
U2AF1-204ENST00000459639 ZNF804BA4D1E1 1349 aa29.45■■■□□ 2.31
U2AF1-204ENST00000459639 PI16Q6UXB8 463 aa29.45■■■□□ 2.31
U2AF1-204ENST00000459639 MYH13Q9UKX3 1938 aa29.45■■■□□ 2.3
U2AF1-204ENST00000459639 MYO5AQ9Y4I1 1855 aaKnown RBP29.45■■■□□ 2.3
U2AF1-204ENST00000459639 KCNJ4P48050 445 aa29.44■■■□□ 2.3
U2AF1-204ENST00000459639 CCDC171Q6TFL3 1326 aa29.44■■■□□ 2.3
U2AF1-204ENST00000459639 BBOX1O75936 387 aa29.44■■■□□ 2.3
U2AF1-204ENST00000459639 ZFYP08048 801 aaPredicted RBP29.44■■■□□ 2.3
U2AF1-204ENST00000459639 PDE6BP35913 854 aa29.44■■■□□ 2.3
U2AF1-204ENST00000459639 ANAPC15P60006 121 aa29.44■■■□□ 2.3
U2AF1-204ENST00000459639 HMG20BQ9P0W2 317 aa29.44■■■□□ 2.3
U2AF1-204ENST00000459639 RNF113AO15541 343 aaKnown RBP29.43■■■□□ 2.3
U2AF1-204ENST00000459639 BCAMP50895 628 aa29.43■■■□□ 2.3
U2AF1-204ENST00000459639 RASGRF1Q13972 1273 aa29.43■■■□□ 2.3
U2AF1-204ENST00000459639 RABEP1Q15276 862 aa29.43■■■□□ 2.3
U2AF1-204ENST00000459639 SPATA5Q8NB90 893 aa29.43■■■□□ 2.3
U2AF1-204ENST00000459639 HELLSQ9NRZ9 838 aa29.43■■■□□ 2.3
U2AF1-204ENST00000459639 DAXXQ9UER7 740 aaPredicted RBP29.43■■■□□ 2.3
U2AF1-204ENST00000459639 HSPA4P34932 840 aa29.42■■■□□ 2.3
U2AF1-204ENST00000459639 CAVIN4Q5BKX8 364 aa29.42■■■□□ 2.3
U2AF1-204ENST00000459639 ZMYM1Q5SVZ6 1142 aa29.42■■■□□ 2.3
U2AF1-204ENST00000459639 TMC4Q7Z404 712 aa29.42■■■□□ 2.3
U2AF1-204ENST00000459639 IL17RAQ96F46 866 aa29.42■■■□□ 2.3
U2AF1-204ENST00000459639 GNL3LQ9NVN8 582 aaKnown RBP29.42■■■□□ 2.3
U2AF1-204ENST00000459639 CYP2E1P05181 493 aaPredicted RBP29.41■■■□□ 2.3
U2AF1-204ENST00000459639 MCMDC2Q4G0Z9 681 aa29.41■■■□□ 2.3
U2AF1-204ENST00000459639 XDHP47989 1333 aa29.41■■■□□ 2.3
U2AF1-204ENST00000459639 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.4■■■□□ 2.3
U2AF1-204ENST00000459639 LEMD3Q9Y2U8 911 aa29.4■■■□□ 2.3
U2AF1-204ENST00000459639 SRGNP10124 158 aa29.4■■■□□ 2.3
U2AF1-204ENST00000459639 NPR1P16066 1061 aa29.4■■■□□ 2.3
U2AF1-204ENST00000459639 SNX21Q969T3 373 aa29.4■■■□□ 2.3
U2AF1-204ENST00000459639 LTBP1Q14766 1721 aa29.39■■■□□ 2.3
U2AF1-204ENST00000459639 GYG1P46976 350 aa29.39■■■□□ 2.3
U2AF1-204ENST00000459639 PTH1RQ03431 593 aa29.39■■■□□ 2.3
U2AF1-204ENST00000459639 ZSCAN25Q6NSZ9 544 aa29.39■■■□□ 2.3
U2AF1-204ENST00000459639 ZNF589Q86UQ0 364 aaPredicted RBP29.39■■■□□ 2.3
U2AF1-204ENST00000459639 CHGBP05060 677 aa29.38■■■□□ 2.29
U2AF1-204ENST00000459639 FAM84BQ96KN1 310 aaPredicted RBP29.38■■■□□ 2.29
U2AF1-204ENST00000459639 ANKIB1Q9P2G1 1089 aa29.38■■■□□ 2.29
U2AF1-204ENST00000459639 WTIPA6NIX2 430 aaPredicted RBP29.37■■■□□ 2.29
U2AF1-204ENST00000459639 ZBTB22O15209 634 aa29.37■■■□□ 2.29
U2AF1-204ENST00000459639 FBXO33Q7Z6M2 555 aa29.37■■■□□ 2.29
U2AF1-204ENST00000459639 MAP4K1Q92918 833 aa29.37■■■□□ 2.29
U2AF1-204ENST00000459639 TBC1D2Q9BYX2 928 aa29.37■■■□□ 2.29
U2AF1-204ENST00000459639 PIH1D3Q9NQM4 214 aaKnown RBP29.37■■■□□ 2.29
U2AF1-204ENST00000459639 IRS2Q9Y4H2 1338 aa29.37■■■□□ 2.29
U2AF1-204ENST00000459639 SEMA3EO15041 775 aa29.37■■■□□ 2.29
U2AF1-204ENST00000459639 VPS37DQ86XT2 251 aa29.37■■■□□ 2.29
U2AF1-204ENST00000459639 SLC16A10Q8TF71 515 aa29.37■■■□□ 2.29
U2AF1-204ENST00000459639 PALD1Q9ULE6 856 aa29.37■■■□□ 2.29
U2AF1-204ENST00000459639 SEC62Q99442 399 aaKnown RBP29.36■■■□□ 2.29
U2AF1-204ENST00000459639 CACNA1SQ13698 1873 aa29.35■■■□□ 2.29
U2AF1-204ENST00000459639 MASTLQ96GX5 879 aa29.35■■■□□ 2.29
U2AF1-204ENST00000459639 PPEF1O14829 653 aaPredicted RBP29.34■■■□□ 2.29
U2AF1-204ENST00000459639 ALDH1B1P30837 517 aa29.34■■■□□ 2.29
U2AF1-204ENST00000459639 HSCBQ8IWL3 235 aa29.34■■■□□ 2.29
U2AF1-204ENST00000459639 APPBP2Q92624 585 aa29.34■■■□□ 2.29
U2AF1-204ENST00000459639 MAST3O60307 1309 aa29.34■■■□□ 2.29
U2AF1-204ENST00000459639 PDS5AQ29RF7 1337 aaKnown RBP29.34■■■□□ 2.29
U2AF1-204ENST00000459639 COL1A1P02452 1464 aaPredicted RBP29.34■■■□□ 2.29
U2AF1-204ENST00000459639 KLRK1P26718 216 aa29.34■■■□□ 2.29
U2AF1-204ENST00000459639 C15orf52Q6ZUT6 534 aaKnown RBP29.34■■■□□ 2.29
U2AF1-204ENST00000459639 PODXL2Q9NZ53 605 aa29.34■■■□□ 2.29
U2AF1-204ENST00000459639 DENND2AQ9ULE3 1009 aa29.34■■■□□ 2.29
U2AF1-204ENST00000459639 RBM8AQ9Y5S9 174 aaKnown RBP29.34■■■□□ 2.29
U2AF1-204ENST00000459639 ATP2B4P23634 1241 aa29.33■■■□□ 2.29
U2AF1-204ENST00000459639 HIBADHP31937 336 aaKnown RBP29.33■■■□□ 2.29
U2AF1-204ENST00000459639 ADD2P35612 726 aa29.33■■■□□ 2.29
U2AF1-204ENST00000459639 GPSM2P81274 684 aa29.33■■■□□ 2.29
U2AF1-204ENST00000459639 SP8Q8IXZ3 490 aa29.33■■■□□ 2.29
U2AF1-204ENST00000459639 KCNB2Q92953 911 aa29.33■■■□□ 2.29
U2AF1-204ENST00000459639 IDH1O75874 414 aaKnown RBP29.32■■■□□ 2.28
U2AF1-204ENST00000459639 SLC4A3P48751 1232 aa29.32■■■□□ 2.28
U2AF1-204ENST00000459639 NECTIN1Q15223 517 aa29.32■■■□□ 2.28
U2AF1-204ENST00000459639 UBE3CQ15386 1083 aa29.32■■■□□ 2.28
U2AF1-204ENST00000459639 SLFNL1Q499Z3 407 aa29.32■■■□□ 2.28
U2AF1-204ENST00000459639 CCDC129Q6ZRS4 1044 aa29.32■■■□□ 2.28
U2AF1-204ENST00000459639 IL27Q8NEV9 243 aa29.32■■■□□ 2.28
U2AF1-204ENST00000459639 PDGFDQ9GZP0 370 aaPredicted RBP29.32■■■□□ 2.28
U2AF1-204ENST00000459639 SLC51AQ86UW1 340 aa29.31■■■□□ 2.28
U2AF1-204ENST00000459639 ATP6V0A2Q9Y487 856 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms