RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 CHD4Q14839 1912 aa20.76■□□□□ 0.91
TRIM39-211ENST00000458516 A0A1B0GUL7 405 aa20.76■□□□□ 0.91
TRIM39-211ENST00000458516 ARHGAP27Q6ZUM4 889 aa20.76■□□□□ 0.91
TRIM39-211ENST00000458516 LPIN2Q92539 896 aa20.76■□□□□ 0.91
TRIM39-211ENST00000458516 COL4A5P29400 1685 aa20.76■□□□□ 0.91
TRIM39-211ENST00000458516 SLC5A1P13866 664 aa20.75■□□□□ 0.91
TRIM39-211ENST00000458516 TIMM10P62072 90 aa20.75■□□□□ 0.91
TRIM39-211ENST00000458516 C15orf52Q6ZUT6 534 aaKnown RBP20.75■□□□□ 0.91
TRIM39-211ENST00000458516 TXNRD3Q86VQ6 643 aa20.75■□□□□ 0.91
TRIM39-211ENST00000458516 EAF2Q96CJ1 260 aaPredicted RBP20.75■□□□□ 0.91
TRIM39-211ENST00000458516 ZNF277Q9NRM2 450 aaPredicted RBP20.75■□□□□ 0.91
TRIM39-211ENST00000458516 PSME4Q14997 1843 aa20.74■□□□□ 0.91
TRIM39-211ENST00000458516 GRIN3BO60391 1043 aa20.74■□□□□ 0.91
TRIM39-211ENST00000458516 IFIT1P09914 478 aaKnown RBP20.74■□□□□ 0.91
TRIM39-211ENST00000458516 PRELPP51888 382 aa20.74■□□□□ 0.91
TRIM39-211ENST00000458516 ANKRD45Q5TZF3 282 aa20.74■□□□□ 0.91
TRIM39-211ENST00000458516 CENPQQ7L2Z9 268 aaPredicted RBP20.74■□□□□ 0.91
TRIM39-211ENST00000458516 TIAM2Q8IVF5 1701 aa20.74■□□□□ 0.91
TRIM39-211ENST00000458516 CLASRPQ8N2M8 674 aaKnown RBP20.74■□□□□ 0.91
TRIM39-211ENST00000458516 EYA3Q99504 573 aa20.74■□□□□ 0.91
TRIM39-211ENST00000458516 ADORA1P30542 326 aa20.73■□□□□ 0.91
TRIM39-211ENST00000458516 KIAA2012Q0VF49 1180 aa20.73■□□□□ 0.91
TRIM39-211ENST00000458516 WASHC4Q2M389 1173 aa20.73■□□□□ 0.91
TRIM39-211ENST00000458516 AACSQ86V21 672 aa20.73■□□□□ 0.91
TRIM39-211ENST00000458516 TLR7Q9NYK1 1049 aaKnown RBP20.73■□□□□ 0.91
TRIM39-211ENST00000458516 SCN9AQ15858 1988 aa20.73■□□□□ 0.91
TRIM39-211ENST00000458516 ZNF646O15015 1829 aaPredicted RBP20.73■□□□□ 0.91
TRIM39-211ENST00000458516 RIMBP2O15034 1052 aa20.72■□□□□ 0.91
TRIM39-211ENST00000458516 IARSP41252 1262 aaKnown RBP20.72■□□□□ 0.91
TRIM39-211ENST00000458516 NUCB1Q02818 461 aa20.72■□□□□ 0.91
TRIM39-211ENST00000458516 AOC3Q16853 763 aa20.72■□□□□ 0.91
TRIM39-211ENST00000458516 XAGE2Q96GT9 111 aa20.72■□□□□ 0.91
TRIM39-211ENST00000458516 DBNDD2Q9BQY9 259 aa20.72■□□□□ 0.91
TRIM39-211ENST00000458516 CCDC8Q9H0W5 538 aaPredicted RBP20.72■□□□□ 0.91
TRIM39-211ENST00000458516 DBNLQ9UJU6 430 aaKnown RBP20.72■□□□□ 0.91
TRIM39-211ENST00000458516 AKAP11Q9UKA4 1901 aa20.71■□□□□ 0.91
TRIM39-211ENST00000458516 PPIP5K2O43314 1243 aa20.71■□□□□ 0.91
TRIM39-211ENST00000458516 NEUROD6Q96NK8 337 aa20.71■□□□□ 0.91
TRIM39-211ENST00000458516 ZC3H12CQ9C0D7 883 aaKnown RBP20.71■□□□□ 0.91
TRIM39-211ENST00000458516 VPS33BQ9H267 617 aa20.71■□□□□ 0.91
TRIM39-211ENST00000458516 GTF3C3Q9Y5Q9 886 aa20.71■□□□□ 0.91
TRIM39-211ENST00000458516 GYG1P46976 350 aa20.7■□□□□ 0.9
TRIM39-211ENST00000458516 CHD1LQ86WJ1 897 aa20.7■□□□□ 0.9
TRIM39-211ENST00000458516 FAM84BQ96KN1 310 aaPredicted RBP20.7■□□□□ 0.9
TRIM39-211ENST00000458516 LNPKQ9C0E8 428 aa20.7■□□□□ 0.9
TRIM39-211ENST00000458516 BCL11AQ9H165 835 aa20.7■□□□□ 0.9
TRIM39-211ENST00000458516 FBXO33Q7Z6M2 555 aa20.69■□□□□ 0.9
TRIM39-211ENST00000458516 IFIT2P09913 472 aaKnown RBP20.68■□□□□ 0.9
TRIM39-211ENST00000458516 LMNB1P20700 586 aa20.68■□□□□ 0.9
TRIM39-211ENST00000458516 BCAMP50895 628 aa20.68■□□□□ 0.9
TRIM39-211ENST00000458516 C16orf71Q8IYS4 520 aaPredicted RBP20.68■□□□□ 0.9
TRIM39-211ENST00000458516 LARGE2Q8N3Y3 721 aa20.68■□□□□ 0.9
TRIM39-211ENST00000458516 ZBTB47Q9UFB7 747 aaPredicted RBP20.68■□□□□ 0.9
TRIM39-211ENST00000458516 HIBADHP31937 336 aaKnown RBP20.67■□□□□ 0.9
TRIM39-211ENST00000458516 PHKA1P46020 1223 aa20.67■□□□□ 0.9
TRIM39-211ENST00000458516 DOK7Q18PE1 504 aa20.67■□□□□ 0.9
TRIM39-211ENST00000458516 CAVIN4Q5BKX8 364 aa20.67■□□□□ 0.9
TRIM39-211ENST00000458516 CCDC102BQ68D86 513 aa20.67■□□□□ 0.9
TRIM39-211ENST00000458516 ZNF804AQ7Z570 1209 aa20.67■□□□□ 0.9
TRIM39-211ENST00000458516 OTUD7AQ8TE49 926 aaPredicted RBP20.67■□□□□ 0.9
TRIM39-211ENST00000458516 COA1Q9GZY4 146 aa20.67■□□□□ 0.9
TRIM39-211ENST00000458516 DBNDD1Q9H9R9 158 aa20.67■□□□□ 0.9
TRIM39-211ENST00000458516 SALL3Q9BXA9 1300 aa20.67■□□□□ 0.9
TRIM39-211ENST00000458516 ECE2O60344 883 aa20.66■□□□□ 0.9
TRIM39-211ENST00000458516 CD209Q9NNX6 404 aa20.66■□□□□ 0.9
TRIM39-211ENST00000458516 COL1A1P02452 1464 aaPredicted RBP20.66■□□□□ 0.9
TRIM39-211ENST00000458516 IL1R1P14778 569 aa20.65■□□□□ 0.9
TRIM39-211ENST00000458516 NIM1KQ8IY84 436 aa20.65■□□□□ 0.9
TRIM39-211ENST00000458516 DCAF8L1A6NGE4 600 aa20.64■□□□□ 0.89
TRIM39-211ENST00000458516 YDJCA8MPS7 323 aa20.64■□□□□ 0.89
TRIM39-211ENST00000458516 PDE4AP27815 886 aa20.64■□□□□ 0.89
TRIM39-211ENST00000458516 ARID4AP29374 1257 aaPredicted RBP20.64■□□□□ 0.89
TRIM39-211ENST00000458516 GORABQ5T7V8 394 aa20.64■□□□□ 0.89
TRIM39-211ENST00000458516 VPS37DQ86XT2 251 aa20.64■□□□□ 0.89
TRIM39-211ENST00000458516 TDRD7Q8NHU6 1098 aaKnown RBP20.64■□□□□ 0.89
TRIM39-211ENST00000458516 RNF181Q9P0P0 153 aa20.64■□□□□ 0.89
TRIM39-211ENST00000458516 UTRNP46939 3433 aa20.64■□□□□ 0.89
TRIM39-211ENST00000458516 MYO5AQ9Y4I1 1855 aaKnown RBP20.63■□□□□ 0.89
TRIM39-211ENST00000458516 G3V3G9 751 aa20.63■□□□□ 0.89
TRIM39-211ENST00000458516 ZBTB22O15209 634 aa20.63■□□□□ 0.89
TRIM39-211ENST00000458516 CCDC158Q5M9N0 1113 aa20.63■□□□□ 0.89
TRIM39-211ENST00000458516 DCAF8Q5TAQ9 597 aa20.63■□□□□ 0.89
TRIM39-211ENST00000458516 C9orf131Q5VYM1 1079 aa20.63■□□□□ 0.89
TRIM39-211ENST00000458516 IQSEC3Q9UPP2 1182 aaPredicted RBP20.63■□□□□ 0.89
TRIM39-211ENST00000458516 MX1P20591 662 aa20.62■□□□□ 0.89
TRIM39-211ENST00000458516 TTC39AQ5SRH9 613 aa20.62■□□□□ 0.89
TRIM39-211ENST00000458516 PODNQ7Z5L7 613 aa20.62■□□□□ 0.89
TRIM39-211ENST00000458516 JDP2Q8WYK2 163 aa20.62■□□□□ 0.89
TRIM39-211ENST00000458516 ZNF512BQ96KM6 892 aaPredicted RBP20.62■□□□□ 0.89
TRIM39-211ENST00000458516 ZNRF3Q9ULT6 936 aa20.62■□□□□ 0.89
TRIM39-211ENST00000458516 UQCRFS1P1P0C7P4 283 aa20.61■□□□□ 0.89
TRIM39-211ENST00000458516 SCARF1Q14162 830 aa20.61■□□□□ 0.89
TRIM39-211ENST00000458516 TSHZ3Q63HK5 1081 aa20.61■□□□□ 0.89
TRIM39-211ENST00000458516 GNL3LQ9NVN8 582 aaKnown RBP20.61■□□□□ 0.89
TRIM39-211ENST00000458516 DOCK2Q92608 1830 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 TTC41PQ6P2S7 1318 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 FZD9O00144 591 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 SEMA3EO15041 775 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 MCAMP43121 646 aa20.6■□□□□ 0.89
TRIM39-211ENST00000458516 RASGRF1Q13972 1273 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms