RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 SNAP23O00161 211 aa16.72■□□□□ 0.27
COMMD1-206ENST00000458337 KLRK1P26718 216 aa16.72■□□□□ 0.27
COMMD1-206ENST00000458337 RFX5P48382 616 aaPredicted RBP16.72■□□□□ 0.27
COMMD1-206ENST00000458337 HIRAP54198 1017 aaPredicted RBP16.72■□□□□ 0.27
COMMD1-206ENST00000458337 ZKSCAN2Q63HK3 967 aa16.72■□□□□ 0.27
COMMD1-206ENST00000458337 USP17L1Q7RTZ2 530 aa16.72■□□□□ 0.27
COMMD1-206ENST00000458337 CNTROBQ8N137 903 aa16.72■□□□□ 0.27
COMMD1-206ENST00000458337 AGBL3Q8NEM8 1001 aa16.72■□□□□ 0.27
COMMD1-206ENST00000458337 TNNQ9UQP3 1299 aa16.72■□□□□ 0.27
COMMD1-206ENST00000458337 PSME4Q14997 1843 aa16.71■□□□□ 0.27
COMMD1-206ENST00000458337 KCNJ4P48050 445 aa16.71■□□□□ 0.27
COMMD1-206ENST00000458337 UBE4AQ14139 1066 aa16.71■□□□□ 0.27
COMMD1-206ENST00000458337 RSBN1LQ6PCB5 846 aaPredicted RBP16.71■□□□□ 0.27
COMMD1-206ENST00000458337 MICALL2Q8IY33 904 aa16.71■□□□□ 0.27
COMMD1-206ENST00000458337 ZC3H15Q8WU90 426 aaKnown RBP16.71■□□□□ 0.27
COMMD1-206ENST00000458337 MEIS3Q99687 375 aa16.71■□□□□ 0.27
COMMD1-206ENST00000458337 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
COMMD1-206ENST00000458337 SHTN1A0MZ66 631 aa16.7■□□□□ 0.26
COMMD1-206ENST00000458337 GNAI3P08754 354 aa16.7■□□□□ 0.26
COMMD1-206ENST00000458337 PTPN12Q05209 780 aaKnown RBP16.7■□□□□ 0.26
COMMD1-206ENST00000458337 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
COMMD1-206ENST00000458337 STRIP1Q5VSL9 837 aa16.7■□□□□ 0.26
COMMD1-206ENST00000458337 MAP1SQ66K74 1059 aaPredicted RBP16.7■□□□□ 0.26
COMMD1-206ENST00000458337 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
COMMD1-206ENST00000458337 A0A1B0GUL6 1792 aa16.69■□□□□ 0.26
COMMD1-206ENST00000458337 PLIN1O60240 522 aa16.69■□□□□ 0.26
COMMD1-206ENST00000458337 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
COMMD1-206ENST00000458337 DACT2Q5SW24 774 aa16.69■□□□□ 0.26
COMMD1-206ENST00000458337 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
COMMD1-206ENST00000458337 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
COMMD1-206ENST00000458337 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
COMMD1-206ENST00000458337 IL1R1P14778 569 aa16.68■□□□□ 0.26
COMMD1-206ENST00000458337 HTRA3P83110 453 aa16.68■□□□□ 0.26
COMMD1-206ENST00000458337 VGLL2Q8N8G2 317 aa16.68■□□□□ 0.26
COMMD1-206ENST00000458337 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
COMMD1-206ENST00000458337 CLUAP1Q96AJ1 413 aa16.68■□□□□ 0.26
COMMD1-206ENST00000458337 EYA2O00167 538 aa16.67■□□□□ 0.26
COMMD1-206ENST00000458337 PDE8BO95263 885 aa16.67■□□□□ 0.26
COMMD1-206ENST00000458337 MMP14P50281 582 aa16.67■□□□□ 0.26
COMMD1-206ENST00000458337 MTX1Q13505 466 aa16.67■□□□□ 0.26
COMMD1-206ENST00000458337 TTLL5Q6EMB2 1281 aa16.67■□□□□ 0.26
COMMD1-206ENST00000458337 SAMD7Q7Z3H4 446 aa16.67■□□□□ 0.26
COMMD1-206ENST00000458337 TMEM57Q8N5G2 664 aa16.67■□□□□ 0.26
COMMD1-206ENST00000458337 CREBZFQ9NS37 354 aa16.67■□□□□ 0.26
COMMD1-206ENST00000458337 EGFRP00533 1210 aa16.66■□□□□ 0.26
COMMD1-206ENST00000458337 USP17L8P0C7I0 530 aa16.66■□□□□ 0.26
COMMD1-206ENST00000458337 ATG9AQ7Z3C6 839 aa16.66■□□□□ 0.26
COMMD1-206ENST00000458337 ZNF804AQ7Z570 1209 aa16.66■□□□□ 0.26
COMMD1-206ENST00000458337 FAM84BQ96KN1 310 aaPredicted RBP16.66■□□□□ 0.26
COMMD1-206ENST00000458337 ZNF646O15015 1829 aaPredicted RBP16.66■□□□□ 0.26
COMMD1-206ENST00000458337 CIAO1O76071 339 aa16.65■□□□□ 0.26
COMMD1-206ENST00000458337 SASH1O94885 1247 aa16.65■□□□□ 0.26
COMMD1-206ENST00000458337 GTF2IP78347 998 aa16.65■□□□□ 0.26
COMMD1-206ENST00000458337 TBC1D10BQ4KMP7 808 aaPredicted RBP16.65■□□□□ 0.26
COMMD1-206ENST00000458337 METTL24Q5JXM2 366 aa16.65■□□□□ 0.26
COMMD1-206ENST00000458337 FBXO33Q7Z6M2 555 aa16.65■□□□□ 0.26
COMMD1-206ENST00000458337 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
COMMD1-206ENST00000458337 COPRSQ9NQ92 184 aa16.65■□□□□ 0.26
COMMD1-206ENST00000458337 MYO3BQ8WXR4 1341 aa16.65■□□□□ 0.26
COMMD1-206ENST00000458337 POLR2AP24928 1970 aaKnown RBP16.64■□□□□ 0.25
COMMD1-206ENST00000458337 GNAI2P04899 355 aa16.64■□□□□ 0.25
COMMD1-206ENST00000458337 RLBP1P12271 317 aa16.64■□□□□ 0.25
COMMD1-206ENST00000458337 FGFR2P21802 821 aa16.64■□□□□ 0.25
COMMD1-206ENST00000458337 FKBP1AP62942 108 aaKnown RBP16.64■□□□□ 0.25
COMMD1-206ENST00000458337 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
COMMD1-206ENST00000458337 MXD3Q9BW11 206 aa16.64■□□□□ 0.25
COMMD1-206ENST00000458337 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
COMMD1-206ENST00000458337 ZBTB7BO15156 539 aaPredicted RBP16.63■□□□□ 0.25
COMMD1-206ENST00000458337 HIBADHP31937 336 aaKnown RBP16.63■□□□□ 0.25
COMMD1-206ENST00000458337 KIF4BQ2VIQ3 1234 aa16.63■□□□□ 0.25
COMMD1-206ENST00000458337 CDC37L1Q7L3B6 337 aa16.63■□□□□ 0.25
COMMD1-206ENST00000458337 KLRG1Q96E93 195 aa16.63■□□□□ 0.25
COMMD1-206ENST00000458337 MYOZ2Q9NPC6 264 aa16.63■□□□□ 0.25
COMMD1-206ENST00000458337 FAM205AQ6ZU69 1335 aa16.63■□□□□ 0.25
COMMD1-206ENST00000458337 GYG1P46976 350 aa16.62■□□□□ 0.25
COMMD1-206ENST00000458337 RBM26Q5T8P6 1007 aaKnown RBP16.62■□□□□ 0.25
COMMD1-206ENST00000458337 CST9Q5W186 159 aa16.62■□□□□ 0.25
COMMD1-206ENST00000458337 TRAF5O00463 557 aa16.61■□□□□ 0.25
COMMD1-206ENST00000458337 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
COMMD1-206ENST00000458337 IL15P40933 162 aaPredicted RBP16.61■□□□□ 0.25
COMMD1-206ENST00000458337 FMR1Q06787 632 aaKnown RBP eCLIP16.61■□□□□ 0.25
COMMD1-206ENST00000458337 PUM3Q15397 648 aaKnown RBP16.61■□□□□ 0.25
COMMD1-206ENST00000458337 FTSJ3Q8IY81 847 aaKnown RBP16.61■□□□□ 0.25
COMMD1-206ENST00000458337 OGFOD1Q8N543 542 aa16.61■□□□□ 0.25
COMMD1-206ENST00000458337 CERS5Q8N5B7 392 aa16.61■□□□□ 0.25
COMMD1-206ENST00000458337 JMYQ8N9B5 988 aa16.61■□□□□ 0.25
COMMD1-206ENST00000458337 GLIS2Q9BZE0 524 aaPredicted RBP16.61■□□□□ 0.25
COMMD1-206ENST00000458337 SCARF1Q14162 830 aa16.6■□□□□ 0.25
COMMD1-206ENST00000458337 LPIN2Q92539 896 aa16.6■□□□□ 0.25
COMMD1-206ENST00000458337 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
COMMD1-206ENST00000458337 CEP126Q9P2H0 1117 aa16.6■□□□□ 0.25
COMMD1-206ENST00000458337 RCAN3Q9UKA8 241 aa16.6■□□□□ 0.25
COMMD1-206ENST00000458337 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
COMMD1-206ENST00000458337 TRPM7Q96QT4 1865 aa16.59■□□□□ 0.25
COMMD1-206ENST00000458337 IFIT1P09914 478 aaKnown RBP16.59■□□□□ 0.25
COMMD1-206ENST00000458337 MS4A1P11836 297 aa16.59■□□□□ 0.25
COMMD1-206ENST00000458337 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
COMMD1-206ENST00000458337 CAVIN4Q5BKX8 364 aa16.59■□□□□ 0.25
COMMD1-206ENST00000458337 USP48Q86UV5 1035 aa16.59■□□□□ 0.25
COMMD1-206ENST00000458337 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms