RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 EVI5LQ96CN4 794 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 ZNF594Q96JF6 807 aaPredicted RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 ZNF512BQ96KM6 892 aaPredicted RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 DBNLQ9UJU6 430 aaKnown RBP10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 NRXN2Q9P2S2 1712 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 SPEF2Q9C093 1822 aa10.86□□□□□ -0.67
CDC42EP3-204ENST00000457889 A0A1B0GUL7 405 aa10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 KLRG2A4D1S0 409 aaPredicted RBP10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 REC8O95072 547 aa10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 SMIM5Q71RC9 77 aa10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 DDX46Q7L014 1031 aaKnown RBP10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 TMC4Q7Z404 712 aa10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 SLC16A10Q8TF71 515 aa10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 LPIN2Q92539 896 aa10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 CCDC85AQ96PX6 553 aaPredicted RBP10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 PUS3Q9BZE2 481 aaKnown RBP10.85□□□□□ -0.67
CDC42EP3-204ENST00000457889 ARAP2Q8WZ64 1704 aa10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 TRIM6-TRIM34B2RNG4 842 aa10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 SLC5A1P13866 664 aa10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 ANP32AP39687 249 aaKnown RBP10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 DDR1Q08345 913 aa10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 LRRFIP1Q32MZ4 808 aaKnown RBP10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 CCDC158Q5M9N0 1113 aa10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 BRIP1Q9BX63 1249 aa10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 ANKRD2Q9GZV1 360 aa10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 CCDC8Q9H0W5 538 aaPredicted RBP10.84□□□□□ -0.67
CDC42EP3-204ENST00000457889 ST18O60284 1047 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 IFIT1P09914 478 aaKnown RBP10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 HOXA10P31260 410 aaPredicted RBP10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 RPS8P62241 208 aaKnown RBP10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 GRAPQ13588 217 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 GORABQ5T7V8 394 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 GRAPLQ8TC17 118 aaPredicted RBP10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 RUFY2Q8WXA3 655 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 RPGRQ92834 1020 aaKnown RBP10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 NEUROD6Q96NK8 337 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 HAUS7Q99871 368 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 DBNDD2Q9BQY9 259 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 BCL11AQ9H165 835 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 ANO8Q9HCE9 1232 aaPredicted RBP10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 SEC31BQ9NQW1 1179 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 TLR7Q9NYK1 1049 aaKnown RBP10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 PARP3Q9Y6F1 533 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 RAD50Q92878 1312 aa10.83□□□□□ -0.68
CDC42EP3-204ENST00000457889 CASZ1Q86V15 1759 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 TNRC6CQ9HCJ0 1690 aaKnown RBP10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 AK9Q5TCS8 1911 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 MMP10P09238 476 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 UQCRFS1P1P0C7P4 283 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 FGFR2P21802 821 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 PDE6BP35913 854 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 UBE4AQ14139 1066 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 TSHZ3Q63HK5 1081 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 CDAN1Q8IWY9 1227 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 RILPL2Q969X0 211 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 XAGE2Q96GT9 111 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 RBM17Q96I25 401 aaKnown RBP10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 TBC1D32Q96NH3 1257 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 CRAMP1Q96RY5 1269 aa10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.82□□□□□ -0.68
CDC42EP3-204ENST00000457889 IGSF3O75054 1194 aa10.81□□□□□ -0.68
CDC42EP3-204ENST00000457889 BBOX1O75936 387 aa10.81□□□□□ -0.68
CDC42EP3-204ENST00000457889 CHMLP26374 656 aa10.81□□□□□ -0.68
CDC42EP3-204ENST00000457889 CHRNDQ07001 517 aa10.81□□□□□ -0.68
CDC42EP3-204ENST00000457889 TTC39AQ5SRH9 613 aa10.81□□□□□ -0.68
CDC42EP3-204ENST00000457889 DIAPH3Q9NSV4 1193 aa10.81□□□□□ -0.68
CDC42EP3-204ENST00000457889 ARID4AP29374 1257 aaPredicted RBP10.8□□□□□ -0.68
CDC42EP3-204ENST00000457889 RBM25P49756 843 aaKnown RBP10.8□□□□□ -0.68
CDC42EP3-204ENST00000457889 MFAP1P55081 439 aaKnown RBP10.8□□□□□ -0.68
CDC42EP3-204ENST00000457889 TIMM10P62072 90 aa10.8□□□□□ -0.68
CDC42EP3-204ENST00000457889 TTF1Q15361 905 aaPredicted RBP10.8□□□□□ -0.68
CDC42EP3-204ENST00000457889 DDRGK1Q96HY6 314 aa10.8□□□□□ -0.68
CDC42EP3-204ENST00000457889 ESYT1Q9BSJ8 1104 aa10.8□□□□□ -0.68
CDC42EP3-204ENST00000457889 BOLA2Q9H3K6 86 aa10.8□□□□□ -0.68
CDC42EP3-204ENST00000457889 MINPP1Q9UNW1 487 aa10.8□□□□□ -0.68
CDC42EP3-204ENST00000457889 SEMA3EO15041 775 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 ZFYP08048 801 aaPredicted RBP10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 NPR1P16066 1061 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 TMED8Q6PL24 325 aaPredicted RBP10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 DEFB132Q7Z7B7 95 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 KBTBD3Q8NAB2 608 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 CELF1Q92879 486 aaKnown RBP10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 FSD1Q9BTV5 496 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 C22orf23Q9BZE7 217 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 SNRKQ9NRH2 765 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 GNL3LQ9NVN8 582 aaKnown RBP10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 PAG1Q9NWQ8 432 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 LEMD3Q9Y2U8 911 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 A0A1B0GUL6 1792 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 XDHP47989 1333 aa10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 PDS5AQ29RF7 1337 aaKnown RBP10.79□□□□□ -0.68
CDC42EP3-204ENST00000457889 SGSM2O43147 1006 aa10.78□□□□□ -0.68
CDC42EP3-204ENST00000457889 MCCP23508 829 aa10.78□□□□□ -0.68
CDC42EP3-204ENST00000457889 ALDH1B1P30837 517 aa10.78□□□□□ -0.68
CDC42EP3-204ENST00000457889 CAVIN4Q5BKX8 364 aa10.78□□□□□ -0.68
CDC42EP3-204ENST00000457889 C15orf52Q6ZUT6 534 aaKnown RBP10.78□□□□□ -0.68
CDC42EP3-204ENST00000457889 ZNF804BA4D1E1 1349 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms