RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 C10orf67Q8IYJ2 551 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
MSC-AS1-201ENST00000457356 MATR3P43243 847 aaKnown RBP eCLIP11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 GTF2A1P52655 376 aaPredicted RBP11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 DNM1Q05193 864 aaKnown RBP11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 IKQ13123 557 aaPredicted RBP11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 DNAJC25Q9H1X3 360 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 AXIN2Q9Y2T1 843 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 LRRIQ1Q96JM4 1722 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 VPS72Q15906 364 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 KRT24Q2M2I5 525 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 FAM200AQ8TCP9 573 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 ZC3H12CQ9C0D7 883 aaKnown RBP11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 MAP9Q49MG5 647 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 GOLGA6L10A0A0M3HER8 536 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 CTAGE5O15320 804 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 ATP2B2Q01814 1243 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 NUCB1Q02818 461 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 SEPT7Q16181 437 aaKnown RBP11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 TTC22Q5TAA0 569 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 IQCEQ6IPM2 695 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 CNNM3Q8NE01 707 aa11.24□□□□□ -0.61
MSC-AS1-201ENST00000457356 SPHKAPQ2M3C7 1700 aa11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 IDH1O75874 414 aaKnown RBP11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 ZSCAN22P10073 491 aaPredicted RBP11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 ATP2C2O75185 946 aa11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 ILDR1Q86SU0 546 aaPredicted RBP11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 CTNNA3Q9UI47 895 aa11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 CTR9Q6PD62 1173 aa11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 SNX21Q969T3 373 aa11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 SEPT11Q9NVA2 429 aaKnown RBP11.23□□□□□ -0.61
MSC-AS1-201ENST00000457356 SLU7O95391 586 aaKnown RBP11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 CAPN2P17655 700 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 SYCP1Q15431 976 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 HS1BP3Q53T59 392 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 SMC5Q8IY18 1101 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 TAF4BQ92750 862 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 PTCH1Q13635 1447 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 KDM2BQ8NHM5 1336 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 DTNBO60941 627 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 CDKL5O76039 1030 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 SPA17Q15506 151 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 IMMTQ16891 758 aaKnown RBP11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 GTF3C6Q969F1 213 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 NUP88Q99567 741 aaPredicted RBP11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 ANTXR1Q9H6X2 564 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 NOL7Q9UMY1 257 aaKnown RBP11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 U3KPZ7 1027 aaPredicted RBP11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 ATP7BP35670 1465 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 WDHD1O75717 1129 aaPredicted RBP11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 PAFAH1B1P43034 410 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 HDAC1Q13547 482 aaPredicted RBP11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 STX1AQ16623 288 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 LUZP1Q86V48 1076 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 C8orf58Q8NAV2 365 aa11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSC-AS1-201ENST00000457356 SOS2Q07890 1332 aaPredicted RBP11.21□□□□□ -0.61
MSC-AS1-201ENST00000457356 HLTFQ14527 1009 aaKnown RBP eCLIP11.21□□□□□ -0.61
MSC-AS1-201ENST00000457356 OGFOD1Q8N543 542 aa11.21□□□□□ -0.61
MSC-AS1-201ENST00000457356 AKAP2Q9Y2D5 859 aa11.21□□□□□ -0.61
MSC-AS1-201ENST00000457356 E9PCH4 1651 aa11.21□□□□□ -0.61
MSC-AS1-201ENST00000457356 LMOD1P29536 600 aaPredicted RBP11.21□□□□□ -0.61
MSC-AS1-201ENST00000457356 LRRC2Q9BYS8 371 aa11.21□□□□□ -0.61
MSC-AS1-201ENST00000457356 NACAP1Q9BZK3 213 aa11.21□□□□□ -0.61
MSC-AS1-201ENST00000457356 DDX21Q9NR30 783 aaKnown RBP eCLIP11.21□□□□□ -0.61
MSC-AS1-201ENST00000457356 IRS4O14654 1257 aaPredicted RBP11.21□□□□□ -0.62
MSC-AS1-201ENST00000457356 SLC5A1P13866 664 aa11.21□□□□□ -0.62
MSC-AS1-201ENST00000457356 MAP2K1Q02750 393 aaPredicted RBP11.21□□□□□ -0.62
MSC-AS1-201ENST00000457356 KSR2Q6VAB6 950 aa11.21□□□□□ -0.62
MSC-AS1-201ENST00000457356 UBAC1Q9BSL1 405 aa11.21□□□□□ -0.62
MSC-AS1-201ENST00000457356 TDO2P48775 406 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 RBM26Q5T8P6 1007 aaKnown RBP11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 DZIP1Q86YF9 867 aaKnown RBP11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 GJA3Q9Y6H8 435 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 UBASH3AP57075 661 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 MEIS3Q99687 375 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 RICTORQ6R327 1708 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 CROCC2H7BZ55 1655 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 SH3TC1Q8TE82 1336 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 R3HDM1Q15032 1099 aaKnown RBP11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 PARP10Q53GL7 1025 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 TXLNBQ8N3L3 684 aa11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.2□□□□□ -0.62
MSC-AS1-201ENST00000457356 ZC3H13Q5T200 1668 aaKnown RBP11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 RIMBP2O15034 1052 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 FAM89AQ96GI7 184 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 CHAMP1Q96JM3 812 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 ZSCAN20P17040 1043 aaPredicted RBP11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 IFFO1Q0D2I5 559 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 LMBR1LQ6UX01 489 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 SYT10Q6XYQ8 523 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 MICALL1Q8N3F8 863 aa11.19□□□□□ -0.62
MSC-AS1-201ENST00000457356 CCDC171Q6TFL3 1326 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms