RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 HYPKQ9NX55 129 aa7.96□□□□□ -1.13
FN1-213ENST00000456923 RCAN3Q9UKA8 241 aa7.96□□□□□ -1.13
FN1-213ENST00000456923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.96□□□□□ -1.13
FN1-213ENST00000456923 HOXA10P31260 410 aaPredicted RBP7.96□□□□□ -1.13
FN1-213ENST00000456923 PARP10Q53GL7 1025 aa7.96□□□□□ -1.13
FN1-213ENST00000456923 PLA2G12BQ9BX93 195 aa7.96□□□□□ -1.13
FN1-213ENST00000456923 SLX4Q8IY92 1834 aa7.96□□□□□ -1.14
FN1-213ENST00000456923 PEX19P40855 299 aa7.96□□□□□ -1.14
FN1-213ENST00000456923 SLC20A2Q08357 652 aa7.96□□□□□ -1.14
FN1-213ENST00000456923 PIAS4Q8N2W9 510 aaPredicted RBP7.96□□□□□ -1.14
FN1-213ENST00000456923 ISCA1Q9BUE6 129 aa7.96□□□□□ -1.14
FN1-213ENST00000456923 MBIPQ9NS73 344 aa7.96□□□□□ -1.14
FN1-213ENST00000456923 CHMP5Q9NZZ3 219 aa7.96□□□□□ -1.14
FN1-213ENST00000456923 PAPPA2Q9BXP8 1791 aa7.96□□□□□ -1.14
FN1-213ENST00000456923 RIOK3O14730 519 aaKnown RBP7.95□□□□□ -1.14
FN1-213ENST00000456923 OTUD6BQ8N6M0 293 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 THOC1Q96FV9 657 aaKnown RBP7.95□□□□□ -1.14
FN1-213ENST00000456923 RMI1Q9H9A7 625 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 DONSONQ9NYP3 566 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 CCDC88AQ3V6T2 1871 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 MYO1CO00159 1063 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 MCM10Q7L590 875 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 NUCKS1Q9H1E3 243 aaKnown RBP7.95□□□□□ -1.14
FN1-213ENST00000456923 LCMT1Q9UIC8 334 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 ZBTB1Q9Y2K1 713 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 SPEF2Q9C093 1822 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 MAST2Q6P0Q8 1798 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 NOP2P46087 812 aaKnown RBP7.95□□□□□ -1.14
FN1-213ENST00000456923 GABPB1Q06547 395 aaPredicted RBP7.95□□□□□ -1.14
FN1-213ENST00000456923 KRT222Q8N1A0 295 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 GIMAP7Q8NHV1 300 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 TBC1D2Q9BYX2 928 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 NOL7Q9UMY1 257 aaKnown RBP7.95□□□□□ -1.14
FN1-213ENST00000456923 ZNF652Q9Y2D9 606 aa7.95□□□□□ -1.14
FN1-213ENST00000456923 KCNA3P22001 575 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 SLFN5Q08AF3 891 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 NOLC1Q14978 699 aaKnown RBP eCLIP7.94□□□□□ -1.141e-50■□□□□ 11.2
FN1-213ENST00000456923 GIGYF2Q6Y7W6 1299 aaKnown RBP7.94□□□□□ -1.14
FN1-213ENST00000456923 TMC4Q7Z404 712 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 CCDC34Q96HJ3 373 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 MRFAP1L1Q96HT8 127 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 GBP4Q96PP9 640 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 ZBED9Q6R2W3 1325 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 GNPATO15228 680 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 CEP120Q8N960 986 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 FAM184AQ8NB25 1140 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 PLBD2Q8NHP8 589 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 DBF4Q9UBU7 674 aaPredicted RBP7.94□□□□□ -1.14
FN1-213ENST00000456923 DDR1Q08345 913 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 RBM28Q9NW13 759 aaKnown RBP7.94□□□□□ -1.14
FN1-213ENST00000456923 TFCP2L1Q9NZI6 479 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 CCDC39Q9UFE4 941 aa7.94□□□□□ -1.14
FN1-213ENST00000456923 HSCBQ8IWL3 235 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 BRIP1Q9BX63 1249 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 NYXQ9GZU5 481 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 KCNQ3O43525 872 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 INF2Q27J81 1249 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 RINLQ6ZS11 566 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 FAM177A1Q8N128 213 aaPredicted RBP7.93□□□□□ -1.14
FN1-213ENST00000456923 ARHGAP45Q92619 1136 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 NECTIN2Q92692 538 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 RBM27Q9P2N5 1060 aaKnown RBP7.93□□□□□ -1.14
FN1-213ENST00000456923 PTPRCP08575 1304 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 NOM1Q5C9Z4 860 aaKnown RBP7.93□□□□□ -1.14
FN1-213ENST00000456923 TSPYL4Q9UJ04 414 aa7.93□□□□□ -1.14
FN1-213ENST00000456923 LRRFIP2Q9Y608 721 aaKnown RBP7.93□□□□□ -1.14
FN1-213ENST00000456923 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.93□□□□□ -1.144e-7■■■■□ 24.1
FN1-213ENST00000456923 APAF1O14727 1248 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 RAI14Q9P0K7 980 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 NTSR2O95665 410 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 MCTP1Q6DN14 999 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 MNS1Q8NEH6 495 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 USP16Q9Y5T5 823 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 C8orf34Q49A92 452 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 NFXL1Q6ZNB6 911 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 C7orf43Q8WVR3 580 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 DNAAF4Q8WXU2 420 aa7.92□□□□□ -1.14
FN1-213ENST00000456923 A0A1B0GUL7 405 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 VAMP4O75379 141 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 SOGA3Q5TF21 947 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 AP1ARQ63HQ0 302 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 CTR9Q6PD62 1173 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 GET4Q7L5D6 327 aaPredicted RBP7.91□□□□□ -1.14
FN1-213ENST00000456923 BORCS6Q96GS4 357 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 CRAMP1Q96RY5 1269 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 RTFDC1Q9BY42 306 aaPredicted RBP7.91□□□□□ -1.14
FN1-213ENST00000456923 SLC39A6Q13433 755 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 NFIXQ14938 502 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 CCDC30Q5VVM6 783 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 CC2D2BQ6DHV5 1058 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 RBSNQ9H1K0 784 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 SUDS3Q9H7L9 328 aaPredicted RBP7.91□□□□□ -1.14
FN1-213ENST00000456923 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.91□□□□□ -1.14
FN1-213ENST00000456923 IPO7O95373 1038 aaKnown RBP7.91□□□□□ -1.14
FN1-213ENST00000456923 RFC4P35249 363 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 PRIMPOLQ96LW4 560 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 SYT17Q9BSW7 474 aa7.91□□□□□ -1.14
FN1-213ENST00000456923 TMX4Q9H1E5 349 aaPredicted RBP7.91□□□□□ -1.14
FN1-213ENST00000456923 TULP2O00295 520 aa7.9□□□□□ -1.14
FN1-213ENST00000456923 AP1G2O75843 785 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms