RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 LSG1Q9H089 658 aaKnown RBP11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 SNX14Q9Y5W7 946 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 BRCA1P38398 1863 aaKnown RBP11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 SYT1P21579 422 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 VPS53Q5VIR6 699 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 TAF3Q5VWG9 929 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 G2E3Q7L622 706 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 LRP10Q7Z4F1 713 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 TTLL6Q8N841 843 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 FAM200AQ8TCP9 573 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 KIF1BPQ96EK5 621 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CNPY2Q9Y2B0 182 aa11.87□□□□□ -0.51
CHCHD4P3-201ENST00000455954 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 AK2P54819 239 aa11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 SLC4A10Q6U841 1118 aa11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 PI4K2BQ8TCG2 481 aa11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ZNF622Q969S3 477 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CHAMP1Q96JM3 812 aa11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ALDH8A1Q9H2A2 487 aaPredicted RBP11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 DDX21Q9NR30 783 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ARFGEF1Q9Y6D6 1849 aa11.86□□□□□ -0.51
CHCHD4P3-201ENST00000455954 PNMA6EA0A0J9YXQ4 647 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 FAM177BA6PVY3 158 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ANXA1P04083 346 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 PDCP20941 246 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 GTF2E1P29083 439 aaPredicted RBP11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 FAM193AP78312 1265 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 HDGFL1Q5TGJ6 251 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 GIGYF2Q6Y7W6 1299 aaKnown RBP11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 COPS6Q7L5N1 327 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ZNF34Q8IZ26 560 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 TTC12Q9H892 705 aaPredicted RBP11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 DBF4Q9UBU7 674 aaPredicted RBP11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 MTMR6Q9Y217 621 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
CHCHD4P3-201ENST00000455954 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ADCY9O60503 1353 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 SMTNL1A8MU46 457 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 F6X3S4 739 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 HIP1O00291 1037 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 GLRX3O76003 335 aaKnown RBP11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 SRGNP10124 158 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 GPTP24298 496 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CDC25BP30305 580 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 AIMP1Q12904 312 aaKnown RBP11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 MAP3K11Q16584 847 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 STYK1Q6J9G0 422 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 RUFY3Q7L099 469 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 XAGE3Q8WTP9 111 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CNKSR1Q969H4 720 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 MASTLQ96GX5 879 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 DDX19AQ9NUU7 478 aaKnown RBP11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 HDAC5Q9UQL6 1122 aa11.84□□□□□ -0.51
CHCHD4P3-201ENST00000455954 KLRG2A4D1S0 409 aaPredicted RBP11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 NEMFO60524 1076 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 KRT85P78386 507 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 GABPB1Q06547 395 aaPredicted RBP11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 ANKRD1Q15327 319 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 PARP10Q53GL7 1025 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 HSP90AB3PQ58FF7 597 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 RBM43Q6ZSC3 357 aaKnown RBP11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 RHPN1Q8TCX5 695 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 SNRKQ9NRH2 765 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 HYPKQ9NX55 129 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 PAXBP1Q9Y5B6 917 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 LRRFIP2Q9Y608 721 aaKnown RBP11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 NUP98P52948 1817 aa11.83□□□□□ -0.52
CHCHD4P3-201ENST00000455954 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 NPR1P16066 1061 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 MTX1Q13505 466 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 PPP4R3BQ5MIZ7 849 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 C9orf131Q5VYM1 1079 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 PPP1R42Q7Z4L9 355 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 ERC1Q8IUD2 1116 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 CREBRFQ8IUR6 639 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 TDRD7Q8NHU6 1098 aaKnown RBP11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 GPATCH3Q96I76 525 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 USP44Q9H0E7 712 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 NUP62CLQ9H1M0 184 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 KCNF1Q9H3M0 494 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 GPBP1L1Q9HC44 474 aaPredicted RBP11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 OGFRQ9NZT2 677 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 CGNQ9P2M7 1197 aaKnown RBP11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 CYP46A1Q9Y6A2 500 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 UBN2Q6ZU65 1347 aa11.82□□□□□ -0.52
CHCHD4P3-201ENST00000455954 FIBPO43427 364 aa11.81□□□□□ -0.52
CHCHD4P3-201ENST00000455954 GJB2P29033 226 aa11.81□□□□□ -0.52
CHCHD4P3-201ENST00000455954 ERFEQ4G0M1 354 aa11.81□□□□□ -0.52
CHCHD4P3-201ENST00000455954 ANKRD13DQ6ZTN6 518 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms