RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 FKBP5Q13451 457 aaPredicted RBP5.28□□□□□ -1.56
LINC02540-201ENST00000455554 FAM20CQ8IXL6 584 aa5.28□□□□□ -1.56
LINC02540-201ENST00000455554 FAM200AQ8TCP9 573 aa5.28□□□□□ -1.56
LINC02540-201ENST00000455554 CLUAP1Q96AJ1 413 aa5.28□□□□□ -1.56
LINC02540-201ENST00000455554 FAM83CQ9BQN1 747 aa5.28□□□□□ -1.56
LINC02540-201ENST00000455554 SH2B1Q9NRF2 756 aaPredicted RBP5.28□□□□□ -1.56
LINC02540-201ENST00000455554 SART1O43290 800 aaKnown RBP5.27□□□□□ -1.57
LINC02540-201ENST00000455554 BMP3P12645 472 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 EPHA1P21709 976 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 BRD2P25440 801 aaKnown RBP5.27□□□□□ -1.57
LINC02540-201ENST00000455554 SCNN1AP37088 669 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 COL19A1Q14993 1142 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 CAPN12Q6ZSI9 719 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.27□□□□□ -1.57
LINC02540-201ENST00000455554 BEND4Q6ZU67 534 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 ABI1Q8IZP0 508 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 PIK3R5Q8WYR1 880 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 RASSF4Q9H2L5 321 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 KCNF1Q9H3M0 494 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 FAM13BQ9NYF5 915 aa5.27□□□□□ -1.57
LINC02540-201ENST00000455554 A6NJR5 290 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 FAM177BA6PVY3 158 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 KIF4AO95239 1232 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 CYP2E1P05181 493 aaPredicted RBP5.26□□□□□ -1.57
LINC02540-201ENST00000455554 PREPP48147 710 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 JAG1P78504 1218 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 TTC39BQ5VTQ0 682 aaPredicted RBP5.26□□□□□ -1.57
LINC02540-201ENST00000455554 HGSNATQ68CP4 663 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 ANKRD34AQ69YU3 496 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 C16orf46Q6P387 395 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 SEC31BQ9NQW1 1179 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 HIF3AQ9Y2N7 669 aa5.26□□□□□ -1.57
LINC02540-201ENST00000455554 WDR64B1ANS9 1081 aa5.25□□□□□ -1.57
LINC02540-201ENST00000455554 ACPPP15309 386 aa5.25□□□□□ -1.57
LINC02540-201ENST00000455554 PTPRAP18433 802 aa5.25□□□□□ -1.57
LINC02540-201ENST00000455554 KLHDC7BQ96G42 594 aa5.25□□□□□ -1.57
LINC02540-201ENST00000455554 PRIMPOLQ96LW4 560 aa5.25□□□□□ -1.57
LINC02540-201ENST00000455554 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
LINC02540-201ENST00000455554 PBX4Q9BYU1 374 aa5.25□□□□□ -1.57
LINC02540-201ENST00000455554 FNDC3AQ9Y2H6 1198 aaKnown RBP5.25□□□□□ -1.57
LINC02540-201ENST00000455554 TNFRSF10BO14763 440 aa5.24□□□□□ -1.57
LINC02540-201ENST00000455554 PIP4K2BP78356 416 aa5.24□□□□□ -1.57
LINC02540-201ENST00000455554 OGFOD2Q6N063 350 aa5.24□□□□□ -1.57
LINC02540-201ENST00000455554 NCAPG2Q86XI2 1143 aa5.24□□□□□ -1.57
LINC02540-201ENST00000455554 WNT8BQ93098 351 aa5.24□□□□□ -1.57
LINC02540-201ENST00000455554 ADAM19Q9H013 955 aa5.24□□□□□ -1.57
LINC02540-201ENST00000455554 RNF208Q9H0X6 261 aa5.24□□□□□ -1.57
LINC02540-201ENST00000455554 ABI2Q9NYB9 513 aaPredicted RBP5.24□□□□□ -1.57
LINC02540-201ENST00000455554 PIM2Q9P1W9 311 aa5.24□□□□□ -1.57
LINC02540-201ENST00000455554 ANGEL1Q9UNK9 670 aaKnown RBP5.24□□□□□ -1.57
LINC02540-201ENST00000455554 H3BRJ5 948 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 CABP4P57796 275 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 SWI5Q1ZZU3 235 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 CDCA8Q53HL2 280 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 FDX2Q6P4F2 183 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 CEP120Q8N960 986 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 GIMAP7Q8NHV1 300 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 MFSD14AQ96MC6 490 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 POP1Q99575 1024 aaKnown RBP5.23□□□□□ -1.57
LINC02540-201ENST00000455554 RUSC1Q9BVN2 902 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 OSGEPQ9NPF4 335 aa5.23□□□□□ -1.57
LINC02540-201ENST00000455554 ZBTB39O15060 712 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 GAS2O43903 313 aaKnown RBP5.22□□□□□ -1.57
LINC02540-201ENST00000455554 PRMT3O60678 531 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 RFX1P22670 979 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 ZAP70P43403 619 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 NLRP12P59046 1061 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 GPR152Q8TDT2 470 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 HHIPQ96QV1 700 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 ZMYND15Q9H091 742 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 ATG3Q9NT62 314 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 NOVA2Q9UNW9 492 aaKnown RBP5.22□□□□□ -1.57
LINC02540-201ENST00000455554 LEMD3Q9Y2U8 911 aa5.22□□□□□ -1.57
LINC02540-201ENST00000455554 ACIN1Q9UKV3 1341 aaKnown RBP5.22□□□□□ -1.57
LINC02540-201ENST00000455554 TRPA1O75762 1119 aa5.21□□□□□ -1.58
LINC02540-201ENST00000455554 F13BP05160 661 aa5.21□□□□□ -1.58
LINC02540-201ENST00000455554 MAP4P27816 1152 aaKnown RBP5.21□□□□□ -1.58
LINC02540-201ENST00000455554 OCLNQ16625 522 aa5.21□□□□□ -1.58
LINC02540-201ENST00000455554 MSMPQ1L6U9 139 aa5.21□□□□□ -1.58
LINC02540-201ENST00000455554 SGO2Q562F6 1265 aa5.21□□□□□ -1.58
LINC02540-201ENST00000455554 CFAP70Q5T0N1 1121 aa5.21□□□□□ -1.58
LINC02540-201ENST00000455554 MEGF11A6BM72 1044 aa5.2□□□□□ -1.58
LINC02540-201ENST00000455554 FOSL1P15407 271 aa5.2□□□□□ -1.58
LINC02540-201ENST00000455554 CPSF6Q16630 551 aaKnown RBP eCLIP5.2□□□□□ -1.58
LINC02540-201ENST00000455554 CBLL1Q75N03 491 aa5.2□□□□□ -1.58
LINC02540-201ENST00000455554 FBXL6Q8N531 539 aa5.2□□□□□ -1.58
LINC02540-201ENST00000455554 OSBPL1AQ9BXW6 950 aa5.2□□□□□ -1.58
LINC02540-201ENST00000455554 KANSL3Q9P2N6 904 aa5.2□□□□□ -1.58
LINC02540-201ENST00000455554 NFKBIEO00221 500 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 C8AP07357 584 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 RXRBP28702 533 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 PDE12Q6L8Q7 609 aaKnown RBP5.19□□□□□ -1.58
LINC02540-201ENST00000455554 VSIG10LQ86VR7 867 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 SLC7A3Q8WY07 619 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 FBXL18Q96ME1 805 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 MKNK1Q9BUB5 465 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 ELP3Q9H9T3 547 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 TMEM63CQ9P1W3 806 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 CCDC39Q9UFE4 941 aa5.19□□□□□ -1.58
LINC02540-201ENST00000455554 DLGAP3O95886 979 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms