RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 RNF208Q9H0X6 261 aa12.7□□□□□ -0.38
NIPSNAP1-204ENST00000455496 PANK3Q9H999 370 aa12.7□□□□□ -0.38
NIPSNAP1-204ENST00000455496 CACNA1AO00555 2505 aa12.7□□□□□ -0.38
NIPSNAP1-204ENST00000455496 TMEM265A0A087WTH1 108 aa12.69□□□□□ -0.38
NIPSNAP1-204ENST00000455496 PPP1R12BO60237 982 aaPredicted RBP12.69□□□□□ -0.38
NIPSNAP1-204ENST00000455496 TAF1CQ15572 869 aaPredicted RBP12.69□□□□□ -0.38
NIPSNAP1-204ENST00000455496 FAM109BQ6ICB4 259 aaPredicted RBP12.69□□□□□ -0.38
NIPSNAP1-204ENST00000455496 OGFOD1Q8N543 542 aa12.69□□□□□ -0.38
NIPSNAP1-204ENST00000455496 GUCD1Q96NT3 240 aa12.69□□□□□ -0.38
NIPSNAP1-204ENST00000455496 IRS2Q9Y4H2 1338 aa12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 ZNF316A6NFI3 1004 aaPredicted RBP12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 WNT10BO00744 389 aa12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 WDHD1O75717 1129 aaPredicted RBP12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 CCL5P13501 91 aa12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 HCLS1P14317 486 aaPredicted RBP12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 CAPN2P17655 700 aa12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 GPSM2P81274 684 aa12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 APOBEC3FQ8IUX4 373 aaKnown RBP12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 CLMNQ96JQ2 1002 aa12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 RRP7AQ9Y3A4 280 aaKnown RBP12.68□□□□□ -0.38
NIPSNAP1-204ENST00000455496 UBXN2AP68543 259 aa12.67□□□□□ -0.38
NIPSNAP1-204ENST00000455496 U2AF1L4Q8WU68 220 aaKnown RBP12.67□□□□□ -0.38
NIPSNAP1-204ENST00000455496 BIN2Q9UBW5 565 aaPredicted RBP12.67□□□□□ -0.38
NIPSNAP1-204ENST00000455496 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
NIPSNAP1-204ENST00000455496 NUP98P52948 1817 aa12.67□□□□□ -0.38
NIPSNAP1-204ENST00000455496 SIPA1L3O60292 1781 aaPredicted RBP12.66□□□□□ -0.38
NIPSNAP1-204ENST00000455496 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
NIPSNAP1-204ENST00000455496 GRK4P32298 578 aa12.66□□□□□ -0.38
NIPSNAP1-204ENST00000455496 LACTBP83111 547 aaPredicted RBP12.66□□□□□ -0.38
NIPSNAP1-204ENST00000455496 MAP3K12Q12852 859 aa12.66□□□□□ -0.38
NIPSNAP1-204ENST00000455496 MAFAQ8NHW3 353 aaPredicted RBP12.66□□□□□ -0.38
NIPSNAP1-204ENST00000455496 RAET1EQ8TD07 263 aa12.66□□□□□ -0.38
NIPSNAP1-204ENST00000455496 ZNF646O15015 1829 aaPredicted RBP12.66□□□□□ -0.38
NIPSNAP1-204ENST00000455496 MUC3AQ02505 3323 aa12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 USP17L3A6NCW0 530 aa12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 USP17L4A6NCW7 530 aa12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 DIAPH1O60610 1272 aaKnown RBP12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 SGPL1O95470 568 aa12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 HOXD10P28358 340 aa12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 USP17L1Q7RTZ2 530 aa12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 TRIM47Q96LD4 638 aa12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 UBE2OQ9C0C9 1292 aaKnown RBP12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 ARHGAP39Q9C0H5 1083 aa12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 KNSTRNQ9Y448 316 aa12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 DDX60Q8IY21 1712 aaKnown RBP12.65□□□□□ -0.38
NIPSNAP1-204ENST00000455496 MYL6BP14649 208 aa12.64□□□□□ -0.39
NIPSNAP1-204ENST00000455496 GJA5P36382 358 aa12.64□□□□□ -0.39
NIPSNAP1-204ENST00000455496 MMP14P50281 582 aa12.64□□□□□ -0.39
NIPSNAP1-204ENST00000455496 FAM161BQ96MY7 647 aa12.64□□□□□ -0.39
NIPSNAP1-204ENST00000455496 ZMYND8Q9ULU4 1186 aaPredicted RBP12.64□□□□□ -0.39
NIPSNAP1-204ENST00000455496 RIPOR2Q9Y4F9 1068 aa12.64□□□□□ -0.39
NIPSNAP1-204ENST00000455496 SYNGAP1Q96PV0 1343 aa12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 TAF1P21675 1872 aa12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 TLR2O60603 784 aa12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 TFRCP02786 760 aaKnown RBP12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 MAGEA10P43363 369 aaPredicted RBP12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 IREB2P48200 963 aaKnown RBP12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 SUPT20HL1Q3ZLR7 823 aa12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 C7orf61Q8IZ16 206 aa12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 CELF1Q92879 486 aaKnown RBP12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 DEFB129Q9H1M3 183 aa12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 SRRDQ9UH36 339 aa12.63□□□□□ -0.39
NIPSNAP1-204ENST00000455496 SCN9AQ15858 1988 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 UFL1O94874 794 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 DDX10Q13206 875 aaKnown RBP12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 TJAP1Q5JTD0 557 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 ZNF697Q5TEC3 545 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 PODNQ7Z5L7 613 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 NECAB2Q7Z6G3 386 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 ANKRD13AQ8IZ07 590 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 RTF1Q92541 710 aaKnown RBP12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 PODXL2Q9NZ53 605 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 TRMT112Q9UI30 125 aaKnown RBP12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 ARIH1Q9Y4X5 557 aaPredicted RBP12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
NIPSNAP1-204ENST00000455496 PER1O15534 1290 aaPredicted RBP12.61□□□□□ -0.39
NIPSNAP1-204ENST00000455496 SASH1O94885 1247 aa12.61□□□□□ -0.39
NIPSNAP1-204ENST00000455496 GTF2A2P52657 109 aa12.61□□□□□ -0.39
NIPSNAP1-204ENST00000455496 BRI3BPQ8WY22 251 aa12.61□□□□□ -0.39
NIPSNAP1-204ENST00000455496 ANKIB1Q9P2G1 1089 aa12.61□□□□□ -0.39
NIPSNAP1-204ENST00000455496 GGA1Q9UJY5 639 aa12.61□□□□□ -0.39
NIPSNAP1-204ENST00000455496 PPP2R3BQ9Y5P8 575 aa12.61□□□□□ -0.39
NIPSNAP1-204ENST00000455496 ANKRD36CQ5JPF3 1778 aa12.61□□□□□ -0.39
NIPSNAP1-204ENST00000455496 COL1A1P02452 1464 aaPredicted RBP12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 LRRC37AA6NMS7 1700 aa12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 EYSQ5T1H1 3165 aa12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 PRUNE2Q8WUY3 3088 aa12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 CCL15-CCL14A0A0B4J2E2 113 aa12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 CCL15Q16663 113 aa12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 HSP90AB3PQ58FF7 597 aa12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 OPTNQ96CV9 577 aa12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 CDX2Q99626 313 aaPredicted RBP12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
NIPSNAP1-204ENST00000455496 SYN1P17600 705 aa12.59□□□□□ -0.39
NIPSNAP1-204ENST00000455496 PSMC4P43686 418 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms