RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 EHHADHQ08426 723 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 AGERQ15109 404 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 RNF187Q5TA31 235 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 IFFO2Q5TF58 517 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 PPP1R18Q6NYC8 613 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 CCDC24Q8N4L8 307 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 ABTB2Q8N961 1025 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 ZCRB1Q8TBF4 217 aaKnown RBP6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 KCNB2Q92953 911 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 COL26A1Q96A83 441 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 CFAP53Q96M91 514 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 DMRTB1Q96MA1 342 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 OCSTAMPQ9BR26 566 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 PRKD2Q9BZL6 878 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 UNC93B1Q9H1C4 597 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 OSBPL2Q9H1P3 480 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 OVOS2A0A0J9YW53 1432 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 OVOS2Q6IE36 1432 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 LTBP4Q8N2S1 1624 aa6.72□□□□□ -1.33
HMGB1P4-201ENST00000455362 PNPLA6Q8IY17 1366 aa6.71□□□□□ -1.33
HMGB1P4-201ENST00000455362 MAGEB6P1A0A0J9YX57 407 aa6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 CENPBP07199 599 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 NPR3P17342 541 aa6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 MPSTP25325 297 aa6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 WDR43Q15061 677 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 NBPF20Q3BBV1 942 aa6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 NUTM2GQ5VZR2 741 aa6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 BRINP3Q76B58 766 aa6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 SH3BP5LQ7L8J4 393 aa6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 BPHLQ86WA6 291 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 ZNF526Q8TF50 670 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 DDX17Q92841 729 aaKnown RBP6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 SLC10A4Q96EP9 437 aa6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 CCDC85AQ96PX6 553 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P4-201ENST00000455362 MARF1Q9Y4F3 1742 aaKnown RBP6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 DSC3Q14574 896 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 BMS1Q14692 1282 aaKnown RBP6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 RRS1Q15050 365 aaKnown RBP6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 TCEAL1Q15170 157 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 CCDC181Q5TID7 509 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 NLGN1Q8N2Q7 840 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 FAM160A2Q8N612 972 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 TSEN2Q8NCE0 465 aaKnown RBP6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 ZNF516Q92618 1163 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 VTI1AQ96AJ9 217 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 RNF19AQ9NV58 838 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 EMILIN1Q9Y6C2 1016 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 USP54Q70EL1 1684 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 NPHP3Q7Z494 1330 aa6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 TRPM3Q9HCF6 1732 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P4-201ENST00000455362 SHPRHQ149N8 1683 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 COL3A1P02461 1466 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 DIAPH1O60610 1272 aaKnown RBP6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 ZNF746Q6NUN9 644 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 ZNF654Q8IZM8 581 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 PURBQ96QR8 312 aaKnown RBP6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 MTRQ99707 1265 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 MYH16Q9H6N6 1097 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 CYLDQ9NQC7 956 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 KLHL42Q9P2K6 505 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 CDV3Q9UKY7 258 aaKnown RBP6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 NUDCQ9Y266 331 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 NOP58Q9Y2X3 529 aaKnown RBP6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 RIPOR2Q9Y4F9 1068 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 PCDHGA11Q9Y5H2 935 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 MAP3K19Q56UN5 1328 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 SBNO1A3KN83 1393 aa6.69□□□□□ -1.34
HMGB1P4-201ENST00000455362 BLMP54132 1417 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 SMG6Q86US8 1419 aaKnown RBP6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 PXDNQ92626 1479 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 M0R2N6 131 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 GIGYF1O75420 1035 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 MYCP01106 439 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 U2AF1L5P0DN76 240 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 IL13P35225 146 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 COPS2P61201 443 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 U2AF1Q01081 240 aaKnown RBP eCLIP6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 NFE2L2Q16236 605 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 ALKBH2Q6NS38 261 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 MRFAP1L1Q96HT8 127 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 WWC3Q9ULE0 1092 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 SOS2Q07890 1332 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 SPATA31A3Q5VYP0 1347 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 ZBED9Q6R2W3 1325 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 ALS2Q96Q42 1657 aa6.68□□□□□ -1.34
HMGB1P4-201ENST00000455362 CDK12Q9NYV4 1490 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 SENP3-EIF4A1A0A087X0R7 540 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 LOC102724159A0A0B4J2E5 919 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 U2SURPO15042 1029 aaKnown RBP6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 ADH1BP00325 375 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 GCP02774 474 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 HSD3B2P26439 372 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 PWP2Q15269 919 aaKnown RBP6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 HSP90AB2PQ58FF8 381 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 ALG1LQ6GMV1 187 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 JAZF1Q86VZ6 243 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 SEPT12Q8IYM1 358 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 KCNH5Q8NCM2 988 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 BRINP2Q9C0B6 783 aa6.67□□□□□ -1.34
HMGB1P4-201ENST00000455362 PRDM9Q9NQV7 894 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms