RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ZSCAN31Q96LW9 406 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 PUS3Q9BZE2 481 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 MAST2Q6P0Q8 1798 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 LAMA4Q16363 1823 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 HCLS1P14317 486 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 HOXA10P31260 410 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 TIMM10P62072 90 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 RPS8P62241 208 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 NMIQ13287 307 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 CRY2Q49AN0 593 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 RTL5Q5HYW3 569 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 TSHZ3Q63HK5 1081 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 APPBP2Q92624 585 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 AKT1S1Q96B36 256 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 CRAMP1Q96RY5 1269 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 ANTXR1Q9H6X2 564 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 LRRC4BQ9NT99 713 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 LEMD3Q9Y2U8 911 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 CCDC88AQ3V6T2 1871 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 BBOX1O75936 387 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 TRIM37O94972 964 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 VPS53Q5VIR6 699 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 CERS3Q8IU89 383 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 FBXL16Q8N461 479 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 CNBD1Q8NA66 436 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 WDR19Q8NEZ3 1342 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 TAF5LO75529 589 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 GYS1P13807 737 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 GNAT2P19087 354 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 DDIT3P35638 169 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 NUCB2P80303 420 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 CUL4AQ13619 759 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 CAVIN4Q5BKX8 364 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 PTF1AQ7RTS3 328 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 CCDC125Q86Z20 511 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 RGS22Q8NE09 1264 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 ZSWIM6Q9HCJ5 1215 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 SH2B1Q9NRF2 756 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 DENND2AQ9ULE3 1009 aa8.19□□□□□ -1.1
ECHDC1-210ENST00000454859 CHRNDQ07001 517 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 MAP3K12Q12852 859 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 GRAPQ13588 217 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 NFIXQ14938 502 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 ALX1Q15699 326 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 GRIPAP1Q4V328 841 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 CCDC102BQ68D86 513 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 CLEC17AQ6ZS10 378 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 SYNE4Q8N205 404 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 ZGPATQ8N5A5 531 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 GRAPLQ8TC17 118 aaPredicted RBP8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 RBM17Q96I25 401 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 ANP32EQ9BTT0 268 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 GOLIM4O00461 696 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 DNAJC2Q99543 621 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 MINPP1Q9UNW1 487 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 RBM8AQ9Y5S9 174 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 SNX14Q9Y5W7 946 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 CYP46A1Q9Y6A2 500 aa8.18□□□□□ -1.1
ECHDC1-210ENST00000454859 TNRC6CQ9HCJ0 1690 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 NEK4P51957 841 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 CREB3L3Q68CJ9 461 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 SPATA5Q8NB90 893 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 MTA3Q9BTC8 594 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 BRIP1Q9BX63 1249 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 SALL1Q9NSC2 1324 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 A0A0D9SFI3 127 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 MAP4K4O95819 1239 aaPredicted RBP8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 APBA3O96018 575 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 HSP90AA1P07900 732 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 ADD2P35612 726 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 KCNJ4P48050 445 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 SPTY2D1Q68D10 685 aaPredicted RBP8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 FBXO33Q7Z6M2 555 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 TTC14Q96N46 770 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 PODXL2Q9NZ53 605 aa8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 SRP68Q9UHB9 627 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-210ENST00000454859 PNPLA7Q6ZV29 1317 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 SERPINB2P05120 415 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 PCP11498 1178 aaKnown RBP8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 PDE6BP35913 854 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 MCAMP43121 646 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 PRR5LQ6MZQ0 368 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 RUFY3Q7L099 469 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 PROM2Q8N271 834 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 FAM227BQ96M60 508 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 LIMCH1Q9UPQ0 1083 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 XDHP47989 1333 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 ANKRD31Q8N7Z5 1873 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 LTBP1Q14766 1721 aa8.16□□□□□ -1.1
ECHDC1-210ENST00000454859 SLC27A2O14975 620 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 ATP2B4P23634 1241 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 ADORA1P30542 326 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 ALDH1B1P30837 517 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 FKBP4Q02790 459 aaKnown RBP eCLIP8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 GIMAP6Q6P9H5 292 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 ILDR2Q71H61 639 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 SLC16A10Q8TF71 515 aa8.15□□□□□ -1.1
ECHDC1-210ENST00000454859 RPGRQ92834 1020 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms