RNA–Protein interactions for RNA: ENST00000453863.5

RNF220-206, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-206ENST00000453863 UBE4AQ14139 1066 aa11.32□□□□□ -0.6
RNF220-206ENST00000453863 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
RNF220-206ENST00000453863 C15orf52Q6ZUT6 534 aaKnown RBP11.32□□□□□ -0.6
RNF220-206ENST00000453863 VPS37DQ86XT2 251 aa11.32□□□□□ -0.6
RNF220-206ENST00000453863 ITPRIPQ8IWB1 547 aa11.32□□□□□ -0.6
RNF220-206ENST00000453863 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
RNF220-206ENST00000453863 DZIP1LQ8IYY4 767 aaKnown RBP11.32□□□□□ -0.6
RNF220-206ENST00000453863 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.32□□□□□ -0.6
RNF220-206ENST00000453863 MEIS3Q99687 375 aa11.32□□□□□ -0.6
RNF220-206ENST00000453863 TAF5LO75529 589 aa11.31□□□□□ -0.6
RNF220-206ENST00000453863 GNAI2P04899 355 aa11.31□□□□□ -0.6
RNF220-206ENST00000453863 VIL1P09327 827 aaKnown RBP11.31□□□□□ -0.6
RNF220-206ENST00000453863 STRIP1Q5VSL9 837 aa11.31□□□□□ -0.6
RNF220-206ENST00000453863 OGFOD1Q8N543 542 aa11.31□□□□□ -0.6
RNF220-206ENST00000453863 HELBQ8NG08 1087 aaPredicted RBP11.31□□□□□ -0.6
RNF220-206ENST00000453863 ZC3H15Q8WU90 426 aaKnown RBP11.31□□□□□ -0.6
RNF220-206ENST00000453863 CHMP4BQ9H444 224 aaKnown RBP11.31□□□□□ -0.6
RNF220-206ENST00000453863 CNOT7Q9UIV1 285 aaKnown RBP11.31□□□□□ -0.6
RNF220-206ENST00000453863 ARAP2Q8WZ64 1704 aa11.31□□□□□ -0.6
RNF220-206ENST00000453863 EYA2O00167 538 aa11.3□□□□□ -0.6
RNF220-206ENST00000453863 CIAO1O76071 339 aa11.3□□□□□ -0.6
RNF220-206ENST00000453863 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
RNF220-206ENST00000453863 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
RNF220-206ENST00000453863 CAVIN4Q5BKX8 364 aa11.3□□□□□ -0.6
RNF220-206ENST00000453863 RCAN3Q9UKA8 241 aa11.3□□□□□ -0.6
RNF220-206ENST00000453863 HDAC9Q9UKV0 1011 aa11.3□□□□□ -0.6
RNF220-206ENST00000453863 MYH13Q9UKX3 1938 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 SRGAP3O43295 1099 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 USP17L8P0C7I0 530 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 POTEJP0CG39 1038 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 SLC5A1P13866 664 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 MTX1Q13505 466 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 KIF4BQ2VIQ3 1234 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 TMEM57Q8N5G2 664 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 CD209Q9NNX6 404 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
RNF220-206ENST00000453863 RIPOR2Q9Y4F9 1068 aa11.29□□□□□ -0.6
RNF220-206ENST00000453863 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
RNF220-206ENST00000453863 FRAT2O75474 233 aaPredicted RBP11.28□□□□□ -0.6
RNF220-206ENST00000453863 PDE8BO95263 885 aa11.28□□□□□ -0.6
RNF220-206ENST00000453863 KLRK1P26718 216 aa11.28□□□□□ -0.6
RNF220-206ENST00000453863 HIBADHP31937 336 aaKnown RBP11.28□□□□□ -0.6
RNF220-206ENST00000453863 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
RNF220-206ENST00000453863 MAP1SQ66K74 1059 aaPredicted RBP11.28□□□□□ -0.6
RNF220-206ENST00000453863 TTLL5Q6EMB2 1281 aa11.28□□□□□ -0.6
RNF220-206ENST00000453863 CNTROBQ8N137 903 aa11.28□□□□□ -0.6
RNF220-206ENST00000453863 PUS3Q9BZE2 481 aaKnown RBP11.28□□□□□ -0.6
RNF220-206ENST00000453863 SIL1Q9H173 461 aa11.28□□□□□ -0.6
RNF220-206ENST00000453863 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
RNF220-206ENST00000453863 CEP126Q9P2H0 1117 aa11.28□□□□□ -0.6
RNF220-206ENST00000453863 TRPM7Q96QT4 1865 aa11.27□□□□□ -0.6
RNF220-206ENST00000453863 IL1R1P14778 569 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 RFX5P48382 616 aaPredicted RBP11.27□□□□□ -0.61
RNF220-206ENST00000453863 ZNF280AP59817 542 aaPredicted RBP11.27□□□□□ -0.61
RNF220-206ENST00000453863 GTF2IP78347 998 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 PTPN12Q05209 780 aaKnown RBP11.27□□□□□ -0.61
RNF220-206ENST00000453863 TBC1D10BQ4KMP7 808 aaPredicted RBP11.27□□□□□ -0.61
RNF220-206ENST00000453863 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 DACT2Q5SW24 774 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 TXNRD3Q86VQ6 643 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 KLHDC4Q8TBB5 520 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 TRPM4Q8TD43 1214 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 LPIN2Q92539 896 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 DCPSQ96C86 337 aaKnown RBP11.27□□□□□ -0.61
RNF220-206ENST00000453863 COPRSQ9NQ92 184 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 PASKQ96RG2 1323 aa11.27□□□□□ -0.61
RNF220-206ENST00000453863 TMEM88BA6NKF7 163 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 FKBP1AP62942 108 aaKnown RBP11.26□□□□□ -0.61
RNF220-206ENST00000453863 ATP2B3Q16720 1220 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 CDC37L1Q7L3B6 337 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 SULF1Q8IWU6 871 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 VGLL2Q8N8G2 317 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 MYOZ2Q9NPC6 264 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 GNL3LQ9NVN8 582 aaKnown RBP11.26□□□□□ -0.61
RNF220-206ENST00000453863 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 AKAP2Q9Y2D5 859 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 IRS2Q9Y4H2 1338 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 CEP350Q5VT06 3117 aa11.26□□□□□ -0.61
RNF220-206ENST00000453863 WTIPA6NIX2 430 aaPredicted RBP11.25□□□□□ -0.61
RNF220-206ENST00000453863 SNAP23O00161 211 aa11.25□□□□□ -0.61
RNF220-206ENST00000453863 SASH1O94885 1247 aa11.25□□□□□ -0.61
RNF220-206ENST00000453863 GYG1P46976 350 aa11.25□□□□□ -0.61
RNF220-206ENST00000453863 OS9Q13438 667 aaPredicted RBP11.25□□□□□ -0.61
RNF220-206ENST00000453863 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
RNF220-206ENST00000453863 KRT26Q7Z3Y9 468 aa11.25□□□□□ -0.61
RNF220-206ENST00000453863 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
RNF220-206ENST00000453863 GMLQ99445 158 aa11.25□□□□□ -0.61
RNF220-206ENST00000453863 GGA3Q9NZ52 723 aa11.25□□□□□ -0.61
RNF220-206ENST00000453863 TNNQ9UQP3 1299 aa11.25□□□□□ -0.61
RNF220-206ENST00000453863 MAST3O60307 1309 aa11.25□□□□□ -0.61
RNF220-206ENST00000453863 PITPNM2Q9BZ72 1349 aa11.25□□□□□ -0.61
RNF220-206ENST00000453863 ECM29Q5VYK3 1845 aa11.24□□□□□ -0.61
RNF220-206ENST00000453863 MYO1BO43795 1136 aa11.24□□□□□ -0.61
RNF220-206ENST00000453863 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
RNF220-206ENST00000453863 G3BP1Q13283 466 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNF220-206ENST00000453863 MVPQ14764 893 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms