RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CHMP4CQ96CF2 233 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 PHACTR2O75167 634 aa16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 HMGB1P09429 215 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 ARFGAP3Q9NP61 516 aa16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 RAPGEF4Q8WZA2 1011 aa16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 CWC15Q9P013 229 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 KNDC1Q76NI1 1749 aa16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 LMTK2Q8IWU2 1503 aa16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 TTC21AQ8NDW8 1320 aa16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 CNNM3Q8NE01 707 aa16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 PUF60Q9UHX1 559 aaKnown RBP16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 MLH3Q9UHC1 1453 aa16.03■□□□□ 0.16
UBE2D3-210ENST00000453744 ATP1A3P13637 1013 aa16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 GYS2P54840 703 aa16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 HNRNPH2P55795 449 aaKnown RBP16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 KIAA1468Q9P260 1216 aa16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 KIDINS220Q9ULH0 1771 aa16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 ALKQ9UM73 1620 aa16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 ZNF202O95125 648 aa16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 SPECC1Q5M775 1068 aa16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 CCDC191Q8NCU4 936 aa16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 GPHNQ9NQX3 736 aaPredicted RBP16.02■□□□□ 0.16
UBE2D3-210ENST00000453744 PLEKHG3A1L390 1219 aa16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 ETF1P62495 437 aaKnown RBP16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 RRP12Q5JTH9 1297 aaKnown RBP16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 LZTFL1Q9NQ48 299 aa16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 CLIC4Q9Y696 253 aa16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 OAS2P29728 719 aaKnown RBP16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 CCZ1BP86790 482 aa16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 CCZ1P86791 482 aaPredicted RBP16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 LMBR1LQ6UX01 489 aa16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 ARAP3Q8WWN8 1544 aa16.02■□□□□ 0.15
UBE2D3-210ENST00000453744 ZC3H6P61129 1189 aaKnown RBP16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 KIF4BQ2VIQ3 1234 aa16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 MICU3Q86XE3 530 aa16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 JMYQ8N9B5 988 aa16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 LRRN4CLQ8ND94 238 aa16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 KCNG4Q8TDN1 519 aa16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 PNMA6AP0CW24 399 aaPredicted RBP16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 CDC25BP30305 580 aa16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 TNNI3KQ59H18 835 aa16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 DBNLQ9UJU6 430 aaKnown RBP16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 RCOR1Q9UKL0 485 aa16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 FPGT-TNNI3KV9GXZ4 949 aa16.01■□□□□ 0.15
UBE2D3-210ENST00000453744 ROBO2Q9HCK4 1378 aa16■□□□□ 0.15
UBE2D3-210ENST00000453744 RBM6P78332 1123 aaKnown RBP16■□□□□ 0.15
UBE2D3-210ENST00000453744 IRX5P78411 483 aaPredicted RBP16■□□□□ 0.15
UBE2D3-210ENST00000453744 IMMTQ16891 758 aaKnown RBP16■□□□□ 0.15
UBE2D3-210ENST00000453744 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16■□□□□ 0.15
UBE2D3-210ENST00000453744 TTC39AQ5SRH9 613 aa16■□□□□ 0.15
UBE2D3-210ENST00000453744 DESI2Q9BSY9 194 aa16■□□□□ 0.15
UBE2D3-210ENST00000453744 ANKRD13DQ6ZTN6 518 aa15.99■□□□□ 0.15
UBE2D3-210ENST00000453744 PPFIBP1Q86W92 1011 aa15.99■□□□□ 0.15
UBE2D3-210ENST00000453744 DHX40Q8IX18 779 aaKnown RBP15.99■□□□□ 0.15
UBE2D3-210ENST00000453744 HOOK1Q9UJC3 728 aaKnown RBP15.99■□□□□ 0.15
UBE2D3-210ENST00000453744 NAA16Q6N069 864 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-210ENST00000453744 JAKMIP3Q5VZ66 844 aa15.99■□□□□ 0.15
UBE2D3-210ENST00000453744 E4F1Q66K89 784 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-210ENST00000453744 TPM1P09493 284 aa15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 ADKP55263 362 aaKnown RBP15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 FAM193AP78312 1265 aa15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 SAFBQ15424 915 aaKnown RBP eCLIP15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 PAG1Q9NWQ8 432 aa15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 VPS18Q9P253 973 aa15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 MTX1Q13505 466 aa15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 SARM1Q6SZW1 724 aa15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 CERS3Q8IU89 383 aa15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 TXLNBQ8N3L3 684 aa15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 IMPACTQ9P2X3 320 aa15.98■□□□□ 0.15
UBE2D3-210ENST00000453744 PRC1O43663 620 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 PPP2R3AQ06190 1150 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 PNOCQ13519 176 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 ARMCX5Q6P1M9 558 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 NEURL4Q96JN8 1562 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 PFKFB2O60825 505 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 RHOXF2BP0C7M4 288 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 SMC1AQ14683 1233 aaKnown RBP15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 ADALQ6DHV7 355 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 RHOXF2Q9BQY4 288 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 E7EWF7 191 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 MYL5Q02045 173 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 AKAP4Q5JQC9 854 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 TRMT44Q8IYL2 757 aaKnown RBP15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 RASSF8Q8NHQ8 419 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 ALG1Q9BT22 464 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 CEP126Q9P2H0 1117 aa15.97■□□□□ 0.15
UBE2D3-210ENST00000453744 CCDC158Q5M9N0 1113 aa15.96■□□□□ 0.15
UBE2D3-210ENST00000453744 CCDC102BQ68D86 513 aa15.96■□□□□ 0.15
UBE2D3-210ENST00000453744 NYAP1Q6ZVC0 841 aa15.96■□□□□ 0.15
UBE2D3-210ENST00000453744 RNMTO43148 476 aaKnown RBP15.96■□□□□ 0.15
UBE2D3-210ENST00000453744 PFKFB1P16118 471 aa15.96■□□□□ 0.15
UBE2D3-210ENST00000453744 STX17P56962 302 aa15.96■□□□□ 0.15
UBE2D3-210ENST00000453744 NLRP12P59046 1061 aa15.96■□□□□ 0.15
UBE2D3-210ENST00000453744 LRRFIP1Q32MZ4 808 aaKnown RBP15.96■□□□□ 0.15
UBE2D3-210ENST00000453744 EPHA10Q5JZY3 1008 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms